RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 U2AF2P26368 475 aaKnown RBP eCLIP15.9■□□□□ 0.142e-9■□□□□ 11.2
VCP-207ENST00000493886 GUCY1A2P33402 732 aa15.9■□□□□ 0.14
VCP-207ENST00000493886 DZIP1Q86YF9 867 aaKnown RBP15.9■□□□□ 0.14
VCP-207ENST00000493886 FMR1NBQ8N0W7 255 aaPredicted RBP15.9■□□□□ 0.14
VCP-207ENST00000493886 ZSCAN10Q96SZ4 725 aaPredicted RBP15.9■□□□□ 0.14
VCP-207ENST00000493886 ATP8A2Q9NTI2 1148 aa15.9■□□□□ 0.14
VCP-207ENST00000493886 A0A1B0GVL5 298 aa15.9■□□□□ 0.14
VCP-207ENST00000493886 SERPINB2P05120 415 aa15.9■□□□□ 0.14
VCP-207ENST00000493886 NBPF11Q86T75 865 aa15.9■□□□□ 0.14
VCP-207ENST00000493886 ENAHQ8N8S7 591 aaPredicted RBP15.9■□□□□ 0.14
VCP-207ENST00000493886 C16orf45Q96MC5 204 aaPredicted RBP15.9■□□□□ 0.14
VCP-207ENST00000493886 ST5P78524 1137 aa15.89■□□□□ 0.13
VCP-207ENST00000493886 SLC39A14Q15043 492 aa15.89■□□□□ 0.13
VCP-207ENST00000493886 CCDC82Q8N4S0 544 aa15.89■□□□□ 0.13
VCP-207ENST00000493886 CRACR2BQ8N4Y2 399 aaPredicted RBP15.89■□□□□ 0.13
VCP-207ENST00000493886 TDRD7Q8NHU6 1098 aaKnown RBP15.89■□□□□ 0.13
VCP-207ENST00000493886 WDR66Q8TBY9 1149 aa15.89■□□□□ 0.13
VCP-207ENST00000493886 PRIMPOLQ96LW4 560 aa15.89■□□□□ 0.13
VCP-207ENST00000493886 MAP7D2Q96T17 732 aa15.89■□□□□ 0.13
VCP-207ENST00000493886 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.89■□□□□ 0.13
VCP-207ENST00000493886 CRY2Q49AN0 593 aa15.89■□□□□ 0.13
VCP-207ENST00000493886 IQCA1Q86XH1 822 aa15.89■□□□□ 0.13
VCP-207ENST00000493886 CMTR1Q8N1G2 835 aaKnown RBP15.89■□□□□ 0.13
VCP-207ENST00000493886 RIOK3O14730 519 aaKnown RBP15.88■□□□□ 0.13
VCP-207ENST00000493886 TRIM37O94972 964 aa15.88■□□□□ 0.13
VCP-207ENST00000493886 DEXIO95424 95 aa15.88■□□□□ 0.13
VCP-207ENST00000493886 NDUFA8P51970 172 aa15.88■□□□□ 0.13
VCP-207ENST00000493886 KRT27Q7Z3Y8 459 aa15.88■□□□□ 0.13
VCP-207ENST00000493886 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.88■□□□□ 0.13
VCP-207ENST00000493886 CAVIN2O95810 425 aa15.88■□□□□ 0.13
VCP-207ENST00000493886 EVX2Q03828 476 aa15.88■□□□□ 0.13
VCP-207ENST00000493886 PPP2R5BQ15173 497 aa15.88■□□□□ 0.13
VCP-207ENST00000493886 AXDND1Q5T1B0 1012 aaPredicted RBP15.88■□□□□ 0.13
VCP-207ENST00000493886 IFIT1BQ5T764 474 aaKnown RBP15.88■□□□□ 0.13
VCP-207ENST00000493886 C11orf57Q6ZUT1 292 aaPredicted RBP15.88■□□□□ 0.13
VCP-207ENST00000493886 ZNF804AQ7Z570 1209 aa15.88■□□□□ 0.13
VCP-207ENST00000493886 LDHBP07195 334 aaKnown RBP15.88■□□□□ 0.13
VCP-207ENST00000493886 UTP14CQ5TAP6 766 aaKnown RBP15.88■□□□□ 0.13
VCP-207ENST00000493886 C15orf52Q6ZUT6 534 aaKnown RBP15.88■□□□□ 0.13
VCP-207ENST00000493886 GPR101Q96P66 508 aaPredicted RBP15.88■□□□□ 0.13
VCP-207ENST00000493886 ARPP21Q9UBL0 812 aaPredicted RBP15.88■□□□□ 0.13
VCP-207ENST00000493886 ORC4O43929 436 aa15.87■□□□□ 0.13
VCP-207ENST00000493886 MMP1P03956 469 aa15.87■□□□□ 0.13
VCP-207ENST00000493886 MARCKSP29966 332 aaPredicted RBP15.87■□□□□ 0.13
VCP-207ENST00000493886 ZNF75DP51815 510 aa15.87■□□□□ 0.13
VCP-207ENST00000493886 GPSM2P81274 684 aa15.87■□□□□ 0.13
VCP-207ENST00000493886 SBK1Q52WX2 424 aa15.87■□□□□ 0.13
VCP-207ENST00000493886 IGSF3O75054 1194 aa15.87■□□□□ 0.13
VCP-207ENST00000493886 SAFBQ15424 915 aaKnown RBP eCLIP15.87■□□□□ 0.13
VCP-207ENST00000493886 STX1AQ16623 288 aa15.87■□□□□ 0.13
VCP-207ENST00000493886 CATIPQ7Z7H3 387 aa15.87■□□□□ 0.13
VCP-207ENST00000493886 RBM17Q96I25 401 aaKnown RBP15.87■□□□□ 0.13
VCP-207ENST00000493886 MAP3K14Q99558 947 aa15.87■□□□□ 0.13
VCP-207ENST00000493886 KCNJ14Q9UNX9 436 aa15.87■□□□□ 0.13
VCP-207ENST00000493886 LAMB1P07942 1786 aa15.87■□□□□ 0.13
VCP-207ENST00000493886 WDHD1O75717 1129 aaPredicted RBP15.86■□□□□ 0.13
VCP-207ENST00000493886 SLC3A2P08195 630 aaKnown RBP15.86■□□□□ 0.13
VCP-207ENST00000493886 CYP2D6P10635 497 aa15.86■□□□□ 0.13
VCP-207ENST00000493886 CMA1P23946 247 aa15.86■□□□□ 0.13
VCP-207ENST00000493886 ARID5BQ14865 1188 aa15.86■□□□□ 0.13
VCP-207ENST00000493886 PTPAQ15257 358 aa15.86■□□□□ 0.13
VCP-207ENST00000493886 NOSTRINQ8IVI9 506 aa15.86■□□□□ 0.13
VCP-207ENST00000493886 SDF4Q9BRK5 362 aa15.86■□□□□ 0.13
VCP-207ENST00000493886 CLIP2Q9UDT6 1046 aa15.86■□□□□ 0.13
VCP-207ENST00000493886 BRWD3Q6RI45 1802 aa15.86■□□□□ 0.13
VCP-207ENST00000493886 BTBD18B2RXH4 712 aa15.86■□□□□ 0.13
VCP-207ENST00000493886 PPP6R2O75170 966 aa15.86■□□□□ 0.13
VCP-207ENST00000493886 CCDC144BQ3MJ40 725 aa15.86■□□□□ 0.13
VCP-207ENST00000493886 DIS3L2Q8IYB7 885 aaKnown RBP15.86■□□□□ 0.13
VCP-207ENST00000493886 JMYQ8N9B5 988 aa15.86■□□□□ 0.13
VCP-207ENST00000493886 RNF26Q9BY78 433 aaPredicted RBP15.86■□□□□ 0.13
VCP-207ENST00000493886 KIAA1551Q9HCM1 1747 aa15.86■□□□□ 0.13
VCP-207ENST00000493886 UFL1O94874 794 aa15.85■□□□□ 0.13
VCP-207ENST00000493886 ZBTB9Q96C00 473 aa15.85■□□□□ 0.13
VCP-207ENST00000493886 DLEC1Q9Y238 1755 aa15.85■□□□□ 0.13
VCP-207ENST00000493886 DDR1Q08345 913 aa15.85■□□□□ 0.13
VCP-207ENST00000493886 MCM9Q9NXL9 1143 aa15.85■□□□□ 0.13
VCP-207ENST00000493886 PFKFB1P16118 471 aa15.84■□□□□ 0.13
VCP-207ENST00000493886 ATP2B4P23634 1241 aa15.84■□□□□ 0.13
VCP-207ENST00000493886 GSTO1P78417 241 aa15.84■□□□□ 0.13
VCP-207ENST00000493886 PDE4BQ07343 736 aa15.84■□□□□ 0.13
VCP-207ENST00000493886 GRIK5Q16478 980 aa15.84■□□□□ 0.13
VCP-207ENST00000493886 FOXP1Q9H334 677 aaPredicted RBP15.84■□□□□ 0.13
VCP-207ENST00000493886 GGA1Q9UJY5 639 aa15.84■□□□□ 0.13
VCP-207ENST00000493886 MROH7-TTC4A0A0A0MT08 1334 aa15.84■□□□□ 0.13
VCP-207ENST00000493886 MYH6P13533 1939 aa15.84■□□□□ 0.13
VCP-207ENST00000493886 GOLGA6L19H0YKK7 550 aa15.84■□□□□ 0.13
VCP-207ENST00000493886 ZNF202O95125 648 aa15.84■□□□□ 0.13
VCP-207ENST00000493886 USP17L8P0C7I0 530 aa15.84■□□□□ 0.13
VCP-207ENST00000493886 CALM1P0DP23 149 aa15.84■□□□□ 0.13
VCP-207ENST00000493886 CALM2P0DP24 149 aa15.84■□□□□ 0.13
VCP-207ENST00000493886 CALM3P0DP25 149 aa15.84■□□□□ 0.13
VCP-207ENST00000493886 AKAP17AQ02040 695 aaKnown RBP15.84■□□□□ 0.13
VCP-207ENST00000493886 TROAPQ12815 778 aa15.84■□□□□ 0.13
VCP-207ENST00000493886 FAM47AQ5JRC9 791 aa15.84■□□□□ 0.13
VCP-207ENST00000493886 RBM28Q9NW13 759 aaKnown RBP15.84■□□□□ 0.13
VCP-207ENST00000493886 ANO10Q9NW15 660 aa15.84■□□□□ 0.13
VCP-207ENST00000493886 POLRMTO00411 1230 aaKnown RBP15.84■□□□□ 0.13
VCP-207ENST00000493886 BBOX1O75936 387 aa15.84■□□□□ 0.13
VCP-207ENST00000493886 DDAH1O94760 285 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms