RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 GDF11O95390 407 aa22.87■■□□□ 1.25
USP39-218ENST00000493829 MCM5P33992 734 aa22.87■■□□□ 1.25
USP39-218ENST00000493829 TFAP4Q01664 338 aa22.87■■□□□ 1.25
USP39-218ENST00000493829 CDCA5Q96FF9 252 aa22.87■■□□□ 1.25
USP39-218ENST00000493829 PDRG1Q9NUG6 133 aa22.87■■□□□ 1.25
USP39-218ENST00000493829 ZSWIM5Q9P217 1185 aa22.87■■□□□ 1.25
USP39-218ENST00000493829 NMT2O60551 498 aa22.86■■□□□ 1.25
USP39-218ENST00000493829 HMGB1P09429 215 aaKnown RBP22.86■■□□□ 1.25
USP39-218ENST00000493829 TSPY3P0CV98 308 aa22.86■■□□□ 1.25
USP39-218ENST00000493829 TSPY8P0CW00 308 aa22.86■■□□□ 1.25
USP39-218ENST00000493829 AKR1B1P15121 316 aa22.86■■□□□ 1.25
USP39-218ENST00000493829 DHX32Q7L7V1 743 aaKnown RBP22.86■■□□□ 1.25
USP39-218ENST00000493829 GPHNQ9NQX3 736 aaPredicted RBP22.86■■□□□ 1.25
USP39-218ENST00000493829 TRAF5O00463 557 aa22.85■■□□□ 1.25
USP39-218ENST00000493829 FGD1P98174 961 aa22.85■■□□□ 1.25
USP39-218ENST00000493829 CDC37L1Q7L3B6 337 aa22.85■■□□□ 1.25
USP39-218ENST00000493829 LARP6Q9BRS8 491 aaKnown RBP22.85■■□□□ 1.25
USP39-218ENST00000493829 FMR1Q06787 632 aaKnown RBP eCLIP22.84■■□□□ 1.253e-6■■■□□ 16.1
USP39-218ENST00000493829 RRP1BQ14684 758 aaKnown RBP22.84■■□□□ 1.25
USP39-218ENST00000493829 CERKLQ49MI3 558 aaPredicted RBP22.84■■□□□ 1.25
USP39-218ENST00000493829 METTL16Q86W50 562 aaKnown RBP22.84■■□□□ 1.25
USP39-218ENST00000493829 CD2BP2O95400 341 aaKnown RBP22.84■■□□□ 1.25
USP39-218ENST00000493829 Q6ZUG5 572 aa22.84■■□□□ 1.25
USP39-218ENST00000493829 CLEC10AQ8IUN9 316 aa22.84■■□□□ 1.25
USP39-218ENST00000493829 UBAC1Q9BSL1 405 aa22.84■■□□□ 1.25
USP39-218ENST00000493829 EXOSC10Q01780 885 aaKnown RBP22.83■■□□□ 1.24
USP39-218ENST00000493829 SUPT20HL1Q3ZLR7 823 aa22.83■■□□□ 1.24
USP39-218ENST00000493829 DCAF15Q66K64 600 aa22.83■■□□□ 1.24
USP39-218ENST00000493829 TATDN1Q6P1N9 297 aa22.83■■□□□ 1.24
USP39-218ENST00000493829 ZNF408Q9H9D4 720 aa22.83■■□□□ 1.24
USP39-218ENST00000493829 TNKSO95271 1327 aa22.82■■□□□ 1.24
USP39-218ENST00000493829 IFIT3O14879 490 aaKnown RBP22.82■■□□□ 1.24
USP39-218ENST00000493829 ST18O60284 1047 aa22.82■■□□□ 1.24
USP39-218ENST00000493829 TBC1D12O60347 775 aa22.82■■□□□ 1.24
USP39-218ENST00000493829 YY1P25490 414 aa22.82■■□□□ 1.24
USP39-218ENST00000493829 AK2P54819 239 aa22.82■■□□□ 1.24
USP39-218ENST00000493829 HOOK2Q96ED9 719 aa22.82■■□□□ 1.24
USP39-218ENST00000493829 TTC14Q96N46 770 aa22.82■■□□□ 1.24
USP39-218ENST00000493829 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.82■■□□□ 1.24
USP39-218ENST00000493829 ATAD5Q96QE3 1844 aa22.82■■□□□ 1.24
USP39-218ENST00000493829 JAG1P78504 1218 aa22.81■■□□□ 1.24
USP39-218ENST00000493829 ABCB5Q2M3G0 1257 aa22.81■■□□□ 1.24
USP39-218ENST00000493829 TMEM67Q5HYA8 995 aa22.81■■□□□ 1.24
USP39-218ENST00000493829 ZNF341Q9BYN7 854 aa22.81■■□□□ 1.24
USP39-218ENST00000493829 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.81■■□□□ 1.24
USP39-218ENST00000493829 GH2P01242 217 aa22.81■■□□□ 1.24
USP39-218ENST00000493829 IQCA1Q86XH1 822 aa22.81■■□□□ 1.24
USP39-218ENST00000493829 BRF1Q92994 677 aa22.81■■□□□ 1.24
USP39-218ENST00000493829 ZSCAN10Q96SZ4 725 aaPredicted RBP22.81■■□□□ 1.24
USP39-218ENST00000493829 SENP2Q9HC62 589 aa22.81■■□□□ 1.24
USP39-218ENST00000493829 GREB1LQ9C091 1923 aaPredicted RBP22.8■■□□□ 1.24
USP39-218ENST00000493829 SH2B2O14492 632 aaPredicted RBP22.8■■□□□ 1.24
USP39-218ENST00000493829 ANP32AP39687 249 aaKnown RBP22.8■■□□□ 1.24
USP39-218ENST00000493829 TOB2Q14106 344 aaPredicted RBP22.8■■□□□ 1.24
USP39-218ENST00000493829 SART3Q15020 963 aaKnown RBP22.8■■□□□ 1.24
USP39-218ENST00000493829 WRNIP1Q96S55 665 aa22.8■■□□□ 1.24
USP39-218ENST00000493829 WDR19Q8NEZ3 1342 aa22.79■■□□□ 1.24
USP39-218ENST00000493829 PLIN4Q96Q06 1357 aa22.79■■□□□ 1.24
USP39-218ENST00000493829 OTOFQ9HC10 1997 aa22.79■■□□□ 1.24
USP39-218ENST00000493829 ERICH2A1L162 156 aa22.79■■□□□ 1.24
USP39-218ENST00000493829 PHF20L1A8MW92 1017 aa22.79■■□□□ 1.24
USP39-218ENST00000493829 INPP5BP32019 993 aa22.79■■□□□ 1.24
USP39-218ENST00000493829 NF2P35240 595 aa22.79■■□□□ 1.24
USP39-218ENST00000493829 TTLL12Q14166 644 aaPredicted RBP22.79■■□□□ 1.24
USP39-218ENST00000493829 CHADLQ6NUI6 762 aa22.79■■□□□ 1.24
USP39-218ENST00000493829 NEDD1Q8NHV4 660 aa22.79■■□□□ 1.24
USP39-218ENST00000493829 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.79■■□□□ 1.24
USP39-218ENST00000493829 IL17RBQ9NRM6 502 aa22.79■■□□□ 1.24
USP39-218ENST00000493829 NAP1L2Q9ULW6 460 aaPredicted RBP22.79■■□□□ 1.24
USP39-218ENST00000493829 MAP3K10Q02779 954 aa22.78■■□□□ 1.24
USP39-218ENST00000493829 RAB3GAP1Q15042 981 aa22.78■■□□□ 1.24
USP39-218ENST00000493829 ENAHQ8N8S7 591 aaPredicted RBP22.78■■□□□ 1.24
USP39-218ENST00000493829 CEP95Q96GE4 821 aa22.78■■□□□ 1.24
USP39-218ENST00000493829 CCDC17Q96LX7 622 aa22.78■■□□□ 1.24
USP39-218ENST00000493829 TAOK2Q9UL54 1235 aa22.78■■□□□ 1.24
USP39-218ENST00000493829 DOCK1Q14185 1865 aa22.78■■□□□ 1.24
USP39-218ENST00000493829 KIF3CO14782 793 aa22.77■■□□□ 1.24
USP39-218ENST00000493829 ATP2B2Q01814 1243 aa22.77■■□□□ 1.24
USP39-218ENST00000493829 APOBRQ0VD83 1088 aa22.77■■□□□ 1.24
USP39-218ENST00000493829 WTAPQ15007 396 aa22.77■■□□□ 1.24
USP39-218ENST00000493829 SEPT2Q15019 361 aa22.77■■□□□ 1.24
USP39-218ENST00000493829 NFXL1Q6ZNB6 911 aa22.77■■□□□ 1.24
USP39-218ENST00000493829 MOB2Q70IA6 237 aa22.77■■□□□ 1.24
USP39-218ENST00000493829 RAB11FIP4Q86YS3 637 aa22.77■■□□□ 1.24
USP39-218ENST00000493829 IGDCC4Q8TDY8 1250 aa22.77■■□□□ 1.24
USP39-218ENST00000493829 TMEM87BQ96K49 555 aa22.77■■□□□ 1.24
USP39-218ENST00000493829 LY9Q9HBG7 655 aa22.77■■□□□ 1.24
USP39-218ENST00000493829 ZBTB21Q9ULJ3 1066 aa22.77■■□□□ 1.24
USP39-218ENST00000493829 STX8Q9UNK0 236 aa22.77■■□□□ 1.24
USP39-218ENST00000493829 ANGEL1Q9UNK9 670 aaKnown RBP22.77■■□□□ 1.24
USP39-218ENST00000493829 CAP2P40123 477 aa22.77■■□□□ 1.24
USP39-218ENST00000493829 CCDC84Q86UT8 332 aaPredicted RBP22.77■■□□□ 1.24
USP39-218ENST00000493829 ZKSCAN4Q969J2 545 aaPredicted RBP22.77■■□□□ 1.24
USP39-218ENST00000493829 CABP5Q9NP86 173 aa22.77■■□□□ 1.24
USP39-218ENST00000493829 PAPPA2Q9BXP8 1791 aa22.76■■□□□ 1.23
USP39-218ENST00000493829 SEC23AQ15436 765 aa22.76■■□□□ 1.23
USP39-218ENST00000493829 IFIT1BQ5T764 474 aaKnown RBP22.76■■□□□ 1.23
USP39-218ENST00000493829 TMEM179Q6ZVK1 233 aa22.76■■□□□ 1.23
USP39-218ENST00000493829 CHMP4CQ96CF2 233 aa22.76■■□□□ 1.23
USP39-218ENST00000493829 PPP1R12BO60237 982 aaPredicted RBP22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms