RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 GMLQ99445 158 aa15.88■□□□□ 0.13
COPS7B-221ENST00000488111 MKRN1Q9UHC7 482 aaKnown RBP15.88■□□□□ 0.13
COPS7B-221ENST00000488111 NAP1L2Q9ULW6 460 aaPredicted RBP15.88■□□□□ 0.13
COPS7B-221ENST00000488111 NEDD4P46934 1319 aa15.87■□□□□ 0.13
COPS7B-221ENST00000488111 SOCS7O14512 581 aa15.87■□□□□ 0.13
COPS7B-221ENST00000488111 PLCG2P16885 1265 aa15.87■□□□□ 0.13
COPS7B-221ENST00000488111 CACNB3P54284 484 aa15.87■□□□□ 0.13
COPS7B-221ENST00000488111 CFAP100Q494V2 611 aa15.87■□□□□ 0.13
COPS7B-221ENST00000488111 KRT222Q8N1A0 295 aa15.87■□□□□ 0.13
COPS7B-221ENST00000488111 ZDHHC15Q96MV8 337 aa15.87■□□□□ 0.13
COPS7B-221ENST00000488111 TOMM22Q9NS69 142 aa15.87■□□□□ 0.13
COPS7B-221ENST00000488111 GJA3Q9Y6H8 435 aa15.87■□□□□ 0.13
COPS7B-221ENST00000488111 ADAMTSL1Q8N6G6 1762 aa15.87■□□□□ 0.13
COPS7B-221ENST00000488111 SHTN1A0MZ66 631 aa15.87■□□□□ 0.13
COPS7B-221ENST00000488111 B4E1Z4 1266 aa15.87■□□□□ 0.13
COPS7B-221ENST00000488111 FAM193AP78312 1265 aa15.87■□□□□ 0.13
COPS7B-221ENST00000488111 NAA30Q147X3 362 aaPredicted RBP15.87■□□□□ 0.13
COPS7B-221ENST00000488111 TPRNQ4KMQ1 711 aa15.87■□□□□ 0.13
COPS7B-221ENST00000488111 RRP12Q5JTH9 1297 aaKnown RBP15.87■□□□□ 0.13
COPS7B-221ENST00000488111 DHX32Q7L7V1 743 aaKnown RBP15.87■□□□□ 0.13
COPS7B-221ENST00000488111 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.87■□□□□ 0.13
COPS7B-221ENST00000488111 NCOA7Q8NI08 942 aa15.87■□□□□ 0.13
COPS7B-221ENST00000488111 SERPINA10Q9UK55 444 aa15.87■□□□□ 0.13
COPS7B-221ENST00000488111 MRVI1Q9Y6F6 885 aa15.87■□□□□ 0.13
COPS7B-221ENST00000488111 ARFGEF1Q9Y6D6 1849 aa15.87■□□□□ 0.13
COPS7B-221ENST00000488111 ZNF646O15015 1829 aaPredicted RBP15.86■□□□□ 0.13
COPS7B-221ENST00000488111 MYO3BQ8WXR4 1341 aa15.86■□□□□ 0.13
COPS7B-221ENST00000488111 IRX5P78411 483 aaPredicted RBP15.86■□□□□ 0.13
COPS7B-221ENST00000488111 LRMPQ12912 555 aa15.86■□□□□ 0.13
COPS7B-221ENST00000488111 AKNAD1Q5T1N1 836 aa15.86■□□□□ 0.13
COPS7B-221ENST00000488111 Q6ZUG5 572 aa15.86■□□□□ 0.13
COPS7B-221ENST00000488111 RALYLQ86SE5 291 aaKnown RBP15.86■□□□□ 0.13
COPS7B-221ENST00000488111 ZNF397Q8NF99 534 aaPredicted RBP15.86■□□□□ 0.13
COPS7B-221ENST00000488111 PRMT6Q96LA8 375 aaPredicted RBP15.86■□□□□ 0.13
COPS7B-221ENST00000488111 MRIQ9BWK5 157 aa15.86■□□□□ 0.13
COPS7B-221ENST00000488111 SMC3Q9UQE7 1217 aa15.86■□□□□ 0.13
COPS7B-221ENST00000488111 FLT1P17948 1338 aa15.86■□□□□ 0.13
COPS7B-221ENST00000488111 FZD9O00144 591 aa15.86■□□□□ 0.13
COPS7B-221ENST00000488111 PRDM1O75626 825 aa15.86■□□□□ 0.13
COPS7B-221ENST00000488111 EIF6P56537 245 aaKnown RBP15.86■□□□□ 0.13
COPS7B-221ENST00000488111 HDLBPQ00341 1268 aaKnown RBP15.86■□□□□ 0.13
COPS7B-221ENST00000488111 DNM1Q05193 864 aaKnown RBP15.86■□□□□ 0.13
COPS7B-221ENST00000488111 TRDNQ13061 729 aa15.86■□□□□ 0.13
COPS7B-221ENST00000488111 MFSD6Q6ZSS7 791 aa15.86■□□□□ 0.13
COPS7B-221ENST00000488111 PLA2G4DQ86XP0 818 aa15.86■□□□□ 0.13
COPS7B-221ENST00000488111 OGFOD1Q8N543 542 aa15.86■□□□□ 0.13
COPS7B-221ENST00000488111 IPO4Q8TEX9 1081 aaKnown RBP15.86■□□□□ 0.13
COPS7B-221ENST00000488111 TDRD3Q9H7E2 651 aaKnown RBP15.86■□□□□ 0.13
COPS7B-221ENST00000488111 DDX4Q9NQI0 724 aaKnown RBP15.86■□□□□ 0.13
COPS7B-221ENST00000488111 LIMCH1Q9UPQ0 1083 aa15.86■□□□□ 0.13
COPS7B-221ENST00000488111 MTMR6Q9Y217 621 aa15.86■□□□□ 0.13
COPS7B-221ENST00000488111 WDHD1O75717 1129 aaPredicted RBP15.85■□□□□ 0.13
COPS7B-221ENST00000488111 LMNB1P20700 586 aa15.85■□□□□ 0.13
COPS7B-221ENST00000488111 SLC20A2Q08357 652 aa15.85■□□□□ 0.13
COPS7B-221ENST00000488111 NFIAQ12857 509 aa15.85■□□□□ 0.13
COPS7B-221ENST00000488111 TNIP1Q15025 636 aa15.85■□□□□ 0.13
COPS7B-221ENST00000488111 CERS3Q8IU89 383 aa15.85■□□□□ 0.13
COPS7B-221ENST00000488111 MB21D2Q8IYB1 491 aaPredicted RBP15.85■□□□□ 0.13
COPS7B-221ENST00000488111 GPHNQ9NQX3 736 aaPredicted RBP15.85■□□□□ 0.13
COPS7B-221ENST00000488111 ARPP21Q9UBL0 812 aaPredicted RBP15.85■□□□□ 0.13
COPS7B-221ENST00000488111 ZNF541Q9H0D2 1346 aa15.85■□□□□ 0.13
COPS7B-221ENST00000488111 BAZ2AQ9UIF9 1905 aaKnown RBP15.85■□□□□ 0.13
COPS7B-221ENST00000488111 POLR3DP05423 398 aaPredicted RBP15.85■□□□□ 0.13
COPS7B-221ENST00000488111 HMGB1P09429 215 aaKnown RBP15.85■□□□□ 0.13
COPS7B-221ENST00000488111 PLCD1P51178 756 aa15.85■□□□□ 0.13
COPS7B-221ENST00000488111 EXOSC10Q01780 885 aaKnown RBP15.85■□□□□ 0.13
COPS7B-221ENST00000488111 TYRO3Q06418 890 aa15.85■□□□□ 0.13
COPS7B-221ENST00000488111 TOB2Q14106 344 aaPredicted RBP15.85■□□□□ 0.13
COPS7B-221ENST00000488111 CYB5R4Q7L1T6 521 aa15.85■□□□□ 0.13
COPS7B-221ENST00000488111 AGBL3Q8NEM8 1001 aa15.85■□□□□ 0.13
COPS7B-221ENST00000488111 HDAC9Q9UKV0 1011 aa15.85■□□□□ 0.13
COPS7B-221ENST00000488111 ZNF75DP51815 510 aa15.84■□□□□ 0.13
COPS7B-221ENST00000488111 MAP3K11Q16584 847 aa15.84■□□□□ 0.13
COPS7B-221ENST00000488111 STAG1Q8WVM7 1258 aa15.84■□□□□ 0.13
COPS7B-221ENST00000488111 DYNLL2Q96FJ2 89 aa15.84■□□□□ 0.13
COPS7B-221ENST00000488111 ANAPC4Q9UJX5 808 aa15.84■□□□□ 0.13
COPS7B-221ENST00000488111 PRC1O43663 620 aa15.84■□□□□ 0.13
COPS7B-221ENST00000488111 LARGE1O95461 756 aa15.84■□□□□ 0.13
COPS7B-221ENST00000488111 ANTXR2P58335 489 aa15.84■□□□□ 0.13
COPS7B-221ENST00000488111 TCP10Q12799 353 aa15.84■□□□□ 0.13
COPS7B-221ENST00000488111 GPR162Q16538 588 aa15.84■□□□□ 0.13
COPS7B-221ENST00000488111 SBK1Q52WX2 424 aa15.84■□□□□ 0.13
COPS7B-221ENST00000488111 C12orf60Q5U649 245 aa15.84■□□□□ 0.13
COPS7B-221ENST00000488111 CREBRFQ8IUR6 639 aa15.84■□□□□ 0.13
COPS7B-221ENST00000488111 TIGD1Q96MW7 591 aa15.84■□□□□ 0.13
COPS7B-221ENST00000488111 DLGAP5Q15398 846 aa15.83■□□□□ 0.12
COPS7B-221ENST00000488111 KMT5BQ4FZB7 885 aa15.83■□□□□ 0.12
COPS7B-221ENST00000488111 RBM26Q5T8P6 1007 aaKnown RBP15.83■□□□□ 0.12
COPS7B-221ENST00000488111 LUZP1Q86V48 1076 aa15.83■□□□□ 0.12
COPS7B-221ENST00000488111 ZFPM1Q8IX07 1006 aa15.83■□□□□ 0.12
COPS7B-221ENST00000488111 BRF1Q92994 677 aa15.83■□□□□ 0.12
COPS7B-221ENST00000488111 ZSWIM5Q9P217 1185 aa15.83■□□□□ 0.12
COPS7B-221ENST00000488111 NRBP1Q9UHY1 535 aa15.83■□□□□ 0.12
COPS7B-221ENST00000488111 TPCN1Q9ULQ1 816 aa15.83■□□□□ 0.12
COPS7B-221ENST00000488111 DTNBO60941 627 aa15.83■□□□□ 0.12
COPS7B-221ENST00000488111 GMPSP49915 693 aaPredicted RBP15.83■□□□□ 0.12
COPS7B-221ENST00000488111 NUP62CLQ9H1M0 184 aa15.83■□□□□ 0.12
COPS7B-221ENST00000488111 CBX8Q9HC52 389 aa15.83■□□□□ 0.12
COPS7B-221ENST00000488111 RNF181Q9P0P0 153 aa15.83■□□□□ 0.12
COPS7B-221ENST00000488111 CLRN2A0PK11 232 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms