RNA–Protein interactions for RNA: ENST00000486524.1

SLX4-203, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 2

Gene SLX4, Length 3,075 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-203ENST00000486524 ANKRD2Q9GZV1 360 aa12.96□□□□□ -0.33
SLX4-203ENST00000486524 KCNH3Q9ULD8 1083 aa12.96□□□□□ -0.33
SLX4-203ENST00000486524 V9GY48 417 aaPredicted RBP12.96□□□□□ -0.33
SLX4-203ENST00000486524 MYH13Q9UKX3 1938 aa12.96□□□□□ -0.33
SLX4-203ENST00000486524 FOXN1O15353 648 aa12.96□□□□□ -0.34
SLX4-203ENST00000486524 DZIP1Q86YF9 867 aaKnown RBP12.96□□□□□ -0.34
SLX4-203ENST00000486524 CNNM3Q8NE01 707 aa12.96□□□□□ -0.34
SLX4-203ENST00000486524 MRFAP1L1Q96HT8 127 aa12.96□□□□□ -0.34
SLX4-203ENST00000486524 C16orf45Q96MC5 204 aaPredicted RBP12.96□□□□□ -0.34
SLX4-203ENST00000486524 BCL11BQ9C0K0 894 aaPredicted RBP12.96□□□□□ -0.34
SLX4-203ENST00000486524 HPSEQ9Y251 543 aa12.96□□□□□ -0.34
SLX4-203ENST00000486524 BTAF1O14981 1849 aa12.96□□□□□ -0.34
SLX4-203ENST00000486524 CUTAO60888 179 aa12.95□□□□□ -0.34
SLX4-203ENST00000486524 CDC25BP30305 580 aa12.95□□□□□ -0.34
SLX4-203ENST00000486524 PDILTQ8N807 584 aa12.95□□□□□ -0.34
SLX4-203ENST00000486524 CRNKL1Q9BZJ0 848 aaKnown RBP12.95□□□□□ -0.34
SLX4-203ENST00000486524 DCP1AQ9NPI6 582 aaPredicted RBP12.95□□□□□ -0.34
SLX4-203ENST00000486524 SCN7AQ01118 1682 aa12.95□□□□□ -0.34
SLX4-203ENST00000486524 LMOD1P29536 600 aaPredicted RBP12.95□□□□□ -0.34
SLX4-203ENST00000486524 TM4SF1P30408 202 aa12.95□□□□□ -0.34
SLX4-203ENST00000486524 FAM196AQ6ZSG2 479 aa12.95□□□□□ -0.34
SLX4-203ENST00000486524 SHISA4Q96DD7 197 aa12.95□□□□□ -0.34
SLX4-203ENST00000486524 FOXP1Q9H334 677 aaPredicted RBP12.95□□□□□ -0.34
SLX4-203ENST00000486524 IFNKQ9P0W0 207 aa12.95□□□□□ -0.34
SLX4-203ENST00000486524 NID2Q14112 1375 aa12.95□□□□□ -0.34
SLX4-203ENST00000486524 NFIXQ14938 502 aa12.94□□□□□ -0.34
SLX4-203ENST00000486524 TRAPPC3LQ5T215 181 aa12.94□□□□□ -0.34
SLX4-203ENST00000486524 LRRC8AQ8IWT6 810 aa12.94□□□□□ -0.34
SLX4-203ENST00000486524 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.94□□□□□ -0.34
SLX4-203ENST00000486524 MCM9Q9NXL9 1143 aa12.94□□□□□ -0.34
SLX4-203ENST00000486524 SEMA3EO15041 775 aa12.94□□□□□ -0.34
SLX4-203ENST00000486524 RBM6P78332 1123 aaKnown RBP12.94□□□□□ -0.34
SLX4-203ENST00000486524 RILPL1Q5EBL4 403 aa12.94□□□□□ -0.34
SLX4-203ENST00000486524 METTL16Q86W50 562 aaKnown RBP12.94□□□□□ -0.34
SLX4-203ENST00000486524 FNBP4Q8N3X1 1017 aaPredicted RBP12.94□□□□□ -0.34
SLX4-203ENST00000486524 RGS22Q8NE09 1264 aa12.94□□□□□ -0.34
SLX4-203ENST00000486524 USP17L8P0C7I0 530 aa12.94□□□□□ -0.34
SLX4-203ENST00000486524 MEX3CQ5U5Q3 659 aaKnown RBP12.94□□□□□ -0.34
SLX4-203ENST00000486524 ARID3AQ99856 593 aa12.94□□□□□ -0.34
SLX4-203ENST00000486524 XPO4Q9C0E2 1151 aaKnown RBP12.94□□□□□ -0.34
SLX4-203ENST00000486524 DUOX1Q9NRD9 1551 aa12.94□□□□□ -0.34
SLX4-203ENST00000486524 MYH6P13533 1939 aa12.94□□□□□ -0.34
SLX4-203ENST00000486524 POLR2DO15514 142 aaKnown RBP12.93□□□□□ -0.34
SLX4-203ENST00000486524 PKN1Q16512 942 aa12.93□□□□□ -0.34
SLX4-203ENST00000486524 HSP90AA4PQ58FG1 418 aa12.93□□□□□ -0.34
SLX4-203ENST00000486524 EARS2Q5JPH6 523 aaKnown RBP12.93□□□□□ -0.34
SLX4-203ENST00000486524 KRBA2Q6ZNG9 492 aa12.93□□□□□ -0.34
SLX4-203ENST00000486524 GRAMD1CQ8IYS0 662 aa12.93□□□□□ -0.34
SLX4-203ENST00000486524 TIGD1Q96MW7 591 aa12.93□□□□□ -0.34
SLX4-203ENST00000486524 MTA3Q9BTC8 594 aa12.93□□□□□ -0.34
SLX4-203ENST00000486524 RNF26Q9BY78 433 aaPredicted RBP12.93□□□□□ -0.34
SLX4-203ENST00000486524 MTMR7Q9Y216 660 aa12.93□□□□□ -0.34
SLX4-203ENST00000486524 GOLGB1Q14789 3259 aaKnown RBP12.93□□□□□ -0.34
SLX4-203ENST00000486524 TSPY2A6NKD2 308 aa12.93□□□□□ -0.34
SLX4-203ENST00000486524 ATP1A3P13637 1013 aa12.93□□□□□ -0.34
SLX4-203ENST00000486524 TROAPQ12815 778 aa12.93□□□□□ -0.34
SLX4-203ENST00000486524 DIXDC1Q155Q3 683 aa12.93□□□□□ -0.34
SLX4-203ENST00000486524 USP49Q70CQ1 688 aa12.93□□□□□ -0.34
SLX4-203ENST00000486524 CNBD1Q8NA66 436 aa12.93□□□□□ -0.34
SLX4-203ENST00000486524 MYRIPQ8NFW9 859 aa12.93□□□□□ -0.34
SLX4-203ENST00000486524 FBXO2Q9UK22 296 aaPredicted RBP12.93□□□□□ -0.34
SLX4-203ENST00000486524 XBP1P17861 261 aa12.92□□□□□ -0.34
SLX4-203ENST00000486524 TPM4P67936 248 aa12.92□□□□□ -0.34
SLX4-203ENST00000486524 TPD52L1Q16890 204 aaPredicted RBP12.92□□□□□ -0.34
SLX4-203ENST00000486524 NOM1Q5C9Z4 860 aaKnown RBP12.92□□□□□ -0.34
SLX4-203ENST00000486524 TMC6Q7Z403 805 aa12.92□□□□□ -0.34
SLX4-203ENST00000486524 FOXP4Q8IVH2 680 aaPredicted RBP12.92□□□□□ -0.34
SLX4-203ENST00000486524 PCDHA5Q9Y5H7 936 aa12.92□□□□□ -0.34
SLX4-203ENST00000486524 SKILP12757 684 aa12.92□□□□□ -0.34
SLX4-203ENST00000486524 USP5P45974 858 aa12.92□□□□□ -0.34
SLX4-203ENST00000486524 NCAPHQ15003 741 aa12.92□□□□□ -0.34
SLX4-203ENST00000486524 GRIK5Q16478 980 aa12.92□□□□□ -0.34
SLX4-203ENST00000486524 PTPN21Q16825 1174 aa12.92□□□□□ -0.34
SLX4-203ENST00000486524 PRIMPOLQ96LW4 560 aa12.92□□□□□ -0.34
SLX4-203ENST00000486524 KRT2P35908 639 aa12.92□□□□□ -0.34
SLX4-203ENST00000486524 RCAN1P53805 252 aa12.92□□□□□ -0.34
SLX4-203ENST00000486524 CTCFLQ8NI51 663 aaPredicted RBP12.92□□□□□ -0.34
SLX4-203ENST00000486524 DYNLL2Q96FJ2 89 aa12.92□□□□□ -0.34
SLX4-203ENST00000486524 BPIFA3Q9BQP9 254 aa12.92□□□□□ -0.34
SLX4-203ENST00000486524 CSRNP2Q9H175 543 aa12.92□□□□□ -0.34
SLX4-203ENST00000486524 SERTAD1Q9UHV2 236 aa12.92□□□□□ -0.34
SLX4-203ENST00000486524 TUBE1Q9UJT0 475 aa12.92□□□□□ -0.34
SLX4-203ENST00000486524 SMTNL1A8MU46 457 aa12.91□□□□□ -0.34
SLX4-203ENST00000486524 DYNC1I1O14576 645 aa12.91□□□□□ -0.34
SLX4-203ENST00000486524 LDHBP07195 334 aaKnown RBP12.91□□□□□ -0.34
SLX4-203ENST00000486524 PRR29P0C7W0 189 aa12.91□□□□□ -0.34
SLX4-203ENST00000486524 PTPREP23469 700 aa12.91□□□□□ -0.34
SLX4-203ENST00000486524 FUT2Q10981 343 aa12.91□□□□□ -0.34
SLX4-203ENST00000486524 SRBD1Q8N5C6 995 aaKnown RBP12.91□□□□□ -0.34
SLX4-203ENST00000486524 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.91□□□□□ -0.34
SLX4-203ENST00000486524 ZNF831Q5JPB2 1677 aa12.91□□□□□ -0.34
SLX4-203ENST00000486524 USP27XA6NNY8 438 aa12.91□□□□□ -0.34
SLX4-203ENST00000486524 WNT7AO00755 349 aa12.91□□□□□ -0.34
SLX4-203ENST00000486524 PDE4BQ07343 736 aa12.91□□□□□ -0.34
SLX4-203ENST00000486524 ZNF827Q17R98 1081 aa12.91□□□□□ -0.34
SLX4-203ENST00000486524 OLFM4Q6UX06 510 aa12.91□□□□□ -0.34
SLX4-203ENST00000486524 SH3RF3Q8TEJ3 882 aaPredicted RBP12.91□□□□□ -0.34
SLX4-203ENST00000486524 ZNF592Q92610 1267 aa12.91□□□□□ -0.34
SLX4-203ENST00000486524 LRRC4BQ9NT99 713 aa12.91□□□□□ -0.34
SLX4-203ENST00000486524 ATP8A2Q9NTI2 1148 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms