RNA–Protein interactions for RNA: ENST00000485938.3

CLN5-202, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 2

Gene CLN5, Length 2,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-202ENST00000485938 PPP2R3AQ06190 1150 aa25.71■■□□□ 1.71
CLN5-202ENST00000485938 KANK3Q6NY19 840 aa25.71■■□□□ 1.71
CLN5-202ENST00000485938 UBXN6Q9BZV1 441 aa25.71■■□□□ 1.71
CLN5-202ENST00000485938 DOCK2Q92608 1830 aa25.71■■□□□ 1.71
CLN5-202ENST00000485938 DEXIO95424 95 aa25.7■■□□□ 1.71
CLN5-202ENST00000485938 MAP3K12Q12852 859 aa25.7■■□□□ 1.71
CLN5-202ENST00000485938 HELBQ8NG08 1087 aaPredicted RBP25.7■■□□□ 1.71
CLN5-202ENST00000485938 STAG1Q8WVM7 1258 aa25.7■■□□□ 1.71
CLN5-202ENST00000485938 PIGBQ92521 554 aa25.7■■□□□ 1.71
CLN5-202ENST00000485938 TRMT112Q9UI30 125 aaKnown RBP25.7■■□□□ 1.71
CLN5-202ENST00000485938 A0A1B0GTH6 734 aa25.7■■□□□ 1.7
CLN5-202ENST00000485938 ERICH4A6NGS2 130 aa25.7■■□□□ 1.7
CLN5-202ENST00000485938 PDE8AO60658 829 aa25.7■■□□□ 1.7
CLN5-202ENST00000485938 ERCC5P28715 1186 aaPredicted RBP25.7■■□□□ 1.7
CLN5-202ENST00000485938 WTAPQ15007 396 aa25.7■■□□□ 1.7
CLN5-202ENST00000485938 USP49Q70CQ1 688 aa25.7■■□□□ 1.7
CLN5-202ENST00000485938 ZKSCAN3Q9BRR0 538 aa25.7■■□□□ 1.7
CLN5-202ENST00000485938 DESI2Q9BSY9 194 aa25.7■■□□□ 1.7
CLN5-202ENST00000485938 LRP5O75197 1615 aa25.7■■□□□ 1.7
CLN5-202ENST00000485938 ANKRD36CQ5JPF3 1778 aa25.69■■□□□ 1.7
CLN5-202ENST00000485938 TBC1D8O95759 1140 aa25.69■■□□□ 1.7
CLN5-202ENST00000485938 RASGRF1Q13972 1273 aa25.69■■□□□ 1.7
CLN5-202ENST00000485938 RRP12Q5JTH9 1297 aaKnown RBP25.69■■□□□ 1.7
CLN5-202ENST00000485938 CC2D1AQ6P1N0 951 aaPredicted RBP25.69■■□□□ 1.7
CLN5-202ENST00000485938 OXER1Q8TDS5 423 aa25.69■■□□□ 1.7
CLN5-202ENST00000485938 PRKAB2O43741 272 aa25.69■■□□□ 1.7
CLN5-202ENST00000485938 SART3Q15020 963 aaKnown RBP25.69■■□□□ 1.7
CLN5-202ENST00000485938 CMTR1Q8N1G2 835 aaKnown RBP25.69■■□□□ 1.7
CLN5-202ENST00000485938 CCDC82Q8N4S0 544 aa25.69■■□□□ 1.7
CLN5-202ENST00000485938 CSRNP2Q9H175 543 aa25.69■■□□□ 1.7
CLN5-202ENST00000485938 CEP131Q9UPN4 1083 aa25.69■■□□□ 1.7
CLN5-202ENST00000485938 SLAIN2Q9P270 581 aa25.68■■□□□ 1.7
CLN5-202ENST00000485938 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.68■■□□□ 1.7
CLN5-202ENST00000485938 MROH5Q6ZUA9 1318 aa25.68■■□□□ 1.7
CLN5-202ENST00000485938 SASH3O75995 380 aa25.68■■□□□ 1.7
CLN5-202ENST00000485938 TEX35Q5T0J7 233 aa25.68■■□□□ 1.7
CLN5-202ENST00000485938 APTXQ7Z2E3 356 aaKnown RBP25.68■■□□□ 1.7
CLN5-202ENST00000485938 PANX2Q96RD6 677 aa25.68■■□□□ 1.7
CLN5-202ENST00000485938 MRPL44Q9H9J2 332 aaKnown RBP25.68■■□□□ 1.7
CLN5-202ENST00000485938 CCDC196A0A1B0GTZ2 297 aa25.67■■□□□ 1.7
CLN5-202ENST00000485938 MTF1Q14872 753 aa25.67■■□□□ 1.7
CLN5-202ENST00000485938 DHX58Q96C10 678 aa25.67■■□□□ 1.7
CLN5-202ENST00000485938 AKR1B15C9JRZ8 316 aaPredicted RBP25.66■■□□□ 1.7
CLN5-202ENST00000485938 RCAN1P53805 252 aa25.66■■□□□ 1.7
CLN5-202ENST00000485938 KARSQ15046 597 aaKnown RBP25.66■■□□□ 1.7
CLN5-202ENST00000485938 RABGGTAQ92696 567 aa25.66■■□□□ 1.7
CLN5-202ENST00000485938 MTA3Q9BTC8 594 aa25.66■■□□□ 1.7
CLN5-202ENST00000485938 STRN4Q9NRL3 753 aa25.66■■□□□ 1.7
CLN5-202ENST00000485938 TOMM22Q9NS69 142 aa25.66■■□□□ 1.7
CLN5-202ENST00000485938 ZKSCAN7Q9P0L1 754 aaPredicted RBP25.66■■□□□ 1.7
CLN5-202ENST00000485938 ATP2B1P20020 1258 aa25.66■■□□□ 1.7
CLN5-202ENST00000485938 TDO2P48775 406 aa25.66■■□□□ 1.7
CLN5-202ENST00000485938 LCORLQ8N3X6 602 aa25.66■■□□□ 1.7
CLN5-202ENST00000485938 FANCBQ8NB91 859 aa25.66■■□□□ 1.7
CLN5-202ENST00000485938 CABP5Q9NP86 173 aa25.66■■□□□ 1.7
CLN5-202ENST00000485938 SLC5A1P13866 664 aa25.65■■□□□ 1.7
CLN5-202ENST00000485938 TMTC2Q8N394 836 aa25.65■■□□□ 1.7
CLN5-202ENST00000485938 NACAP1Q9BZK3 213 aa25.65■■□□□ 1.7
CLN5-202ENST00000485938 PNPLA7Q6ZV29 1317 aa25.65■■□□□ 1.7
CLN5-202ENST00000485938 ERICH2A1L162 156 aa25.65■■□□□ 1.7
CLN5-202ENST00000485938 TEX33O43247 280 aa25.65■■□□□ 1.7
CLN5-202ENST00000485938 CCDC175P0C221 793 aa25.65■■□□□ 1.7
CLN5-202ENST00000485938 GNAT2P19087 354 aa25.65■■□□□ 1.7
CLN5-202ENST00000485938 CT47A1Q5JQC4 288 aaPredicted RBP25.65■■□□□ 1.7
CLN5-202ENST00000485938 ZNF654Q8IZM8 581 aa25.65■■□□□ 1.7
CLN5-202ENST00000485938 PARD6BQ9BYG5 372 aa25.65■■□□□ 1.7
CLN5-202ENST00000485938 SLC4A4Q9Y6R1 1079 aa25.65■■□□□ 1.7
CLN5-202ENST00000485938 SOWAHDA6NJG2 315 aa25.64■■□□□ 1.7
CLN5-202ENST00000485938 AATFQ9NY61 560 aaKnown RBP eCLIP25.64■■□□□ 1.7
CLN5-202ENST00000485938 BCORQ6W2J9 1755 aa25.64■■□□□ 1.7
CLN5-202ENST00000485938 A0A087X0B3 334 aa25.64■■□□□ 1.69
CLN5-202ENST00000485938 SPATA1Q5VX52 437 aa25.64■■□□□ 1.69
CLN5-202ENST00000485938 CCDC12Q8WUD4 166 aaPredicted RBP25.64■■□□□ 1.69
CLN5-202ENST00000485938 GOLGA1Q92805 767 aa25.64■■□□□ 1.69
CLN5-202ENST00000485938 SNAP23O00161 211 aa25.63■■□□□ 1.69
CLN5-202ENST00000485938 POLR3GO15318 223 aaPredicted RBP25.63■■□□□ 1.69
CLN5-202ENST00000485938 CUL4BQ13620 913 aa25.63■■□□□ 1.69
CLN5-202ENST00000485938 NUP133Q8WUM0 1156 aa25.63■■□□□ 1.69
CLN5-202ENST00000485938 SHISA4Q96DD7 197 aa25.63■■□□□ 1.69
CLN5-202ENST00000485938 NUP98P52948 1817 aa25.63■■□□□ 1.69
CLN5-202ENST00000485938 CYP19A1P11511 503 aaPredicted RBP25.63■■□□□ 1.69
CLN5-202ENST00000485938 CD44P16070 742 aaKnown RBP25.63■■□□□ 1.69
CLN5-202ENST00000485938 PBX1P40424 430 aa25.63■■□□□ 1.69
CLN5-202ENST00000485938 IRX2Q9BZI1 471 aaPredicted RBP25.63■■□□□ 1.69
CLN5-202ENST00000485938 ARFGAP3Q9NP61 516 aa25.63■■□□□ 1.69
CLN5-202ENST00000485938 CALCOCO1Q9P1Z2 691 aa25.63■■□□□ 1.69
CLN5-202ENST00000485938 ADGRG1Q9Y653 693 aa25.63■■□□□ 1.69
CLN5-202ENST00000485938 RAD9BQ6WBX8 426 aa25.62■■□□□ 1.69
CLN5-202ENST00000485938 SH3RF1Q7Z6J0 888 aa25.62■■□□□ 1.69
CLN5-202ENST00000485938 NAA15Q9BXJ9 866 aaKnown RBP25.62■■□□□ 1.69
CLN5-202ENST00000485938 FAM205CA6NFA0 338 aa25.62■■□□□ 1.69
CLN5-202ENST00000485938 TRIM75PA6NK02 468 aa25.62■■□□□ 1.69
CLN5-202ENST00000485938 RBL2Q08999 1139 aa25.62■■□□□ 1.69
CLN5-202ENST00000485938 CDKAL1Q5VV42 579 aa25.62■■□□□ 1.69
CLN5-202ENST00000485938 IGSF22Q8N9C0 903 aa25.62■■□□□ 1.69
CLN5-202ENST00000485938 ADD3Q9UEY8 706 aaKnown RBP25.62■■□□□ 1.69
CLN5-202ENST00000485938 MYH6P13533 1939 aa25.61■■□□□ 1.69
CLN5-202ENST00000485938 EPSTI1Q96J88 318 aa25.61■■□□□ 1.69
CLN5-202ENST00000485938 SLC4A9Q96Q91 983 aa25.61■■□□□ 1.69
CLN5-202ENST00000485938 RNF26Q9BY78 433 aaPredicted RBP25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms