RNA–Protein interactions for RNA: ENST00000483544.1

LINC00477-201, long intergenic non-protein coding RNA 477, humanhuman

TSL 2 BASIC

Gene LINC00477, Length 1,710 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477-201ENST00000483544 NTRK3Q16288 839 aa14.25□□□□□ -0.13
LINC00477-201ENST00000483544 MAP9Q49MG5 647 aa14.25□□□□□ -0.13
LINC00477-201ENST00000483544 MFSD6Q6ZSS7 791 aa14.25□□□□□ -0.13
LINC00477-201ENST00000483544 VPS37DQ86XT2 251 aa14.25□□□□□ -0.13
LINC00477-201ENST00000483544 CCDC150Q8NCX0 1101 aa14.25□□□□□ -0.13
LINC00477-201ENST00000483544 SMARCC1Q92922 1105 aaPredicted RBP14.25□□□□□ -0.13
LINC00477-201ENST00000483544 BORCS6Q96GS4 357 aa14.25□□□□□ -0.13
LINC00477-201ENST00000483544 PSD3Q9NYI0 1048 aa14.25□□□□□ -0.13
LINC00477-201ENST00000483544 HPSEQ9Y251 543 aa14.25□□□□□ -0.13
LINC00477-201ENST00000483544 ZNF652Q9Y2D9 606 aa14.25□□□□□ -0.13
LINC00477-201ENST00000483544 SLC12A7Q9Y666 1083 aa14.25□□□□□ -0.13
LINC00477-201ENST00000483544 A0A1B0GUL6 1792 aa14.24□□□□□ -0.13
LINC00477-201ENST00000483544 ERICH2A1L162 156 aa14.24□□□□□ -0.13
LINC00477-201ENST00000483544 IFIT3O14879 490 aaKnown RBP14.24□□□□□ -0.13
LINC00477-201ENST00000483544 PFKFB1P16118 471 aa14.24□□□□□ -0.13
LINC00477-201ENST00000483544 DNAJC21Q5F1R6 531 aaKnown RBP14.24□□□□□ -0.13
LINC00477-201ENST00000483544 INTS5Q6P9B9 1019 aaKnown RBP14.24□□□□□ -0.13
LINC00477-201ENST00000483544 ANKRD23Q86SG2 305 aa14.24□□□□□ -0.13
LINC00477-201ENST00000483544 TRIM22Q8IYM9 498 aa14.24□□□□□ -0.13
LINC00477-201ENST00000483544 AOPEPQ8N6M6 819 aa14.24□□□□□ -0.13
LINC00477-201ENST00000483544 MAGEB6Q8N7X4 407 aa14.24□□□□□ -0.13
LINC00477-201ENST00000483544 CACTINQ8WUQ7 758 aaKnown RBP14.24□□□□□ -0.13
LINC00477-201ENST00000483544 PPM1EQ8WY54 764 aa14.24□□□□□ -0.13
LINC00477-201ENST00000483544 MKL1Q969V6 931 aa14.24□□□□□ -0.13
LINC00477-201ENST00000483544 CALR3Q96L12 384 aaKnown RBP14.24□□□□□ -0.13
LINC00477-201ENST00000483544 TOMM22Q9NS69 142 aa14.24□□□□□ -0.13
LINC00477-201ENST00000483544 TUBE1Q9UJT0 475 aa14.24□□□□□ -0.13
LINC00477-201ENST00000483544 KIF28PB7ZC32 967 aa14.24□□□□□ -0.13
LINC00477-201ENST00000483544 MBD4O95243 580 aa14.24□□□□□ -0.13
LINC00477-201ENST00000483544 ERCC3P19447 782 aa14.24□□□□□ -0.13
LINC00477-201ENST00000483544 SYKP43405 635 aa14.24□□□□□ -0.13
LINC00477-201ENST00000483544 NT5C2P49902 561 aa14.24□□□□□ -0.13
LINC00477-201ENST00000483544 GYS2P54840 703 aa14.24□□□□□ -0.13
LINC00477-201ENST00000483544 IRX1P78414 480 aaPredicted RBP14.24□□□□□ -0.13
LINC00477-201ENST00000483544 RASGRF1Q13972 1273 aa14.24□□□□□ -0.13
LINC00477-201ENST00000483544 SETDB1Q15047 1291 aa14.24□□□□□ -0.13
LINC00477-201ENST00000483544 PTPAQ15257 358 aa14.24□□□□□ -0.13
LINC00477-201ENST00000483544 SUSD4Q5VX71 490 aa14.24□□□□□ -0.13
LINC00477-201ENST00000483544 RESP18Q5W5W9 173 aa14.24□□□□□ -0.13
LINC00477-201ENST00000483544 CLEC4GQ6UXB4 293 aa14.24□□□□□ -0.13
LINC00477-201ENST00000483544 MMS22LQ6ZRQ5 1243 aa14.24□□□□□ -0.13
LINC00477-201ENST00000483544 FOXP1Q9H334 677 aaPredicted RBP14.24□□□□□ -0.13
LINC00477-201ENST00000483544 GNL3LQ9NVN8 582 aaKnown RBP14.24□□□□□ -0.13
LINC00477-201ENST00000483544 NRBP1Q9UHY1 535 aa14.24□□□□□ -0.13
LINC00477-201ENST00000483544 ANAPC4Q9UJX5 808 aa14.24□□□□□ -0.13
LINC00477-201ENST00000483544 RRP15Q9Y3B9 282 aaKnown RBP14.24□□□□□ -0.13
LINC00477-201ENST00000483544 ROBO1Q9Y6N7 1651 aa14.23□□□□□ -0.13
LINC00477-201ENST00000483544 NEDD4P46934 1319 aa14.23□□□□□ -0.13
LINC00477-201ENST00000483544 GSG1L2A8MUP6 293 aa14.23□□□□□ -0.13
LINC00477-201ENST00000483544 MPHOSPH10O00566 681 aaKnown RBP14.23□□□□□ -0.13
LINC00477-201ENST00000483544 CBFA2T2O43439 604 aa14.23□□□□□ -0.13
LINC00477-201ENST00000483544 CAMTA2O94983 1202 aa14.23□□□□□ -0.13
LINC00477-201ENST00000483544 ZC3H12AQ5D1E8 599 aaKnown RBP14.23□□□□□ -0.13
LINC00477-201ENST00000483544 OTUD7BQ6GQQ9 843 aa14.23□□□□□ -0.13
LINC00477-201ENST00000483544 C17orf53Q8N3J3 647 aaPredicted RBP14.23□□□□□ -0.13
LINC00477-201ENST00000483544 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.23□□□□□ -0.13
LINC00477-201ENST00000483544 CEP131Q9UPN4 1083 aa14.23□□□□□ -0.13
LINC00477-201ENST00000483544 COL5A3P25940 1745 aaPredicted RBP14.23□□□□□ -0.13
LINC00477-201ENST00000483544 SLIT2O94813 1529 aa14.23□□□□□ -0.13
LINC00477-201ENST00000483544 H0YHG0 523 aa14.22□□□□□ -0.13
LINC00477-201ENST00000483544 CCP110O43303 1012 aa14.22□□□□□ -0.13
LINC00477-201ENST00000483544 C21orf2O43822 256 aa14.22□□□□□ -0.13
LINC00477-201ENST00000483544 CDC27P30260 824 aa14.22□□□□□ -0.13
LINC00477-201ENST00000483544 CRKLP46109 303 aaKnown RBP14.22□□□□□ -0.13
LINC00477-201ENST00000483544 SARNPP82979 210 aaKnown RBP14.22□□□□□ -0.13
LINC00477-201ENST00000483544 BIRC2Q13490 618 aa14.22□□□□□ -0.13
LINC00477-201ENST00000483544 KRBA2Q6ZNG9 492 aa14.22□□□□□ -0.13
LINC00477-201ENST00000483544 ZNF579Q8NAF0 562 aaKnown RBP14.22□□□□□ -0.13
LINC00477-201ENST00000483544 MAP3K14Q99558 947 aa14.22□□□□□ -0.13
LINC00477-201ENST00000483544 EPB41L4AQ9HCS5 686 aaPredicted RBP14.22□□□□□ -0.13
LINC00477-201ENST00000483544 FAM217BQ9NTX9 383 aaPredicted RBP14.22□□□□□ -0.13
LINC00477-201ENST00000483544 ZSWIM5Q9P217 1185 aa14.22□□□□□ -0.13
LINC00477-201ENST00000483544 DLEC1Q9Y238 1755 aa14.22□□□□□ -0.13
LINC00477-201ENST00000483544 IPO7O95373 1038 aaKnown RBP14.21□□□□□ -0.13
LINC00477-201ENST00000483544 DEXIO95424 95 aa14.21□□□□□ -0.13
LINC00477-201ENST00000483544 NTSR2O95665 410 aa14.21□□□□□ -0.13
LINC00477-201ENST00000483544 IVLP07476 585 aa14.21□□□□□ -0.13
LINC00477-201ENST00000483544 TNNT1P13805 278 aa14.21□□□□□ -0.13
LINC00477-201ENST00000483544 LRMPQ12912 555 aa14.21□□□□□ -0.13
LINC00477-201ENST00000483544 UBE4AQ14139 1066 aa14.21□□□□□ -0.13
LINC00477-201ENST00000483544 WTAPQ15007 396 aa14.21□□□□□ -0.13
LINC00477-201ENST00000483544 ZSCAN26Q16670 478 aa14.21□□□□□ -0.13
LINC00477-201ENST00000483544 RTN1Q16799 776 aa14.21□□□□□ -0.13
LINC00477-201ENST00000483544 TPD52L1Q16890 204 aaPredicted RBP14.21□□□□□ -0.13
LINC00477-201ENST00000483544 CCDC144BQ3MJ40 725 aa14.21□□□□□ -0.13
LINC00477-201ENST00000483544 KMT5BQ4FZB7 885 aa14.21□□□□□ -0.13
LINC00477-201ENST00000483544 RILPL1Q5EBL4 403 aa14.21□□□□□ -0.13
LINC00477-201ENST00000483544 MICU3Q86XE3 530 aa14.21□□□□□ -0.13
LINC00477-201ENST00000483544 CCDC144CPQ8IYA2 1237 aa14.21□□□□□ -0.13
LINC00477-201ENST00000483544 ZNF804BA4D1E1 1349 aa14.21□□□□□ -0.13
LINC00477-201ENST00000483544 PDS5AQ29RF7 1337 aaKnown RBP14.21□□□□□ -0.13
LINC00477-201ENST00000483544 SPATA31A1Q5TZJ5 1347 aa14.21□□□□□ -0.13
LINC00477-201ENST00000483544 MYH14Q7Z406 1995 aaKnown RBP14.21□□□□□ -0.13
LINC00477-201ENST00000483544 TRIM66O15016 1216 aa14.21□□□□□ -0.14
LINC00477-201ENST00000483544 SEMA3EO15041 775 aa14.21□□□□□ -0.14
LINC00477-201ENST00000483544 ATP8B1O43520 1251 aa14.21□□□□□ -0.14
LINC00477-201ENST00000483544 DDB1Q16531 1140 aa14.21□□□□□ -0.14
LINC00477-201ENST00000483544 KANK3Q6NY19 840 aa14.21□□□□□ -0.14
LINC00477-201ENST00000483544 NOSTRINQ8IVI9 506 aa14.21□□□□□ -0.14
LINC00477-201ENST00000483544 KRI1Q8N9T8 703 aaKnown RBP14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms