RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 TTC6Q86TZ1 520 aa11.8□□□□□ -0.52
TMEM39A-207ENST00000482162 SH3TC2Q8TF17 1288 aa11.8□□□□□ -0.52
TMEM39A-207ENST00000482162 EDC3Q96F86 508 aaKnown RBP11.8□□□□□ -0.52
TMEM39A-207ENST00000482162 ASCC2Q9H1I8 757 aaPredicted RBP11.8□□□□□ -0.52
TMEM39A-207ENST00000482162 EMILIN3Q9NT22 766 aa11.8□□□□□ -0.52
TMEM39A-207ENST00000482162 MORF4L1Q9UBU8 362 aa11.8□□□□□ -0.52
TMEM39A-207ENST00000482162 SERPINB13Q9UIV8 391 aa11.8□□□□□ -0.52
TMEM39A-207ENST00000482162 PNMA3Q9UL41 463 aa11.8□□□□□ -0.52
TMEM39A-207ENST00000482162 ZNF532Q9HCE3 1301 aa11.8□□□□□ -0.52
TMEM39A-207ENST00000482162 LOC285556D6RIA3 1793 aa11.79□□□□□ -0.52
TMEM39A-207ENST00000482162 MAGEB6P1A0A0J9YX57 407 aa11.79□□□□□ -0.52
TMEM39A-207ENST00000482162 APBB1O00213 710 aa11.79□□□□□ -0.52
TMEM39A-207ENST00000482162 GRK4P32298 578 aa11.79□□□□□ -0.52
TMEM39A-207ENST00000482162 SHMT1P34896 483 aa11.79□□□□□ -0.52
TMEM39A-207ENST00000482162 USP5P45974 858 aa11.79□□□□□ -0.52
TMEM39A-207ENST00000482162 PRKCZQ05513 592 aa11.79□□□□□ -0.52
TMEM39A-207ENST00000482162 PABPC4Q13310 644 aaKnown RBP eCLIP11.79□□□□□ -0.52
TMEM39A-207ENST00000482162 MTMR2Q13614 643 aa11.79□□□□□ -0.52
TMEM39A-207ENST00000482162 POTEEQ6S8J3 1075 aa11.79□□□□□ -0.52
TMEM39A-207ENST00000482162 CRACR2BQ8N4Y2 399 aaPredicted RBP11.79□□□□□ -0.52
TMEM39A-207ENST00000482162 ANKRD13CQ8N6S4 541 aa11.79□□□□□ -0.52
TMEM39A-207ENST00000482162 PXYLP1Q8TE99 480 aa11.79□□□□□ -0.52
TMEM39A-207ENST00000482162 SMCR8Q8TEV9 937 aaPredicted RBP11.79□□□□□ -0.52
TMEM39A-207ENST00000482162 C12orf42Q96LP6 360 aa11.79□□□□□ -0.52
TMEM39A-207ENST00000482162 TMEM106CQ9BVX2 250 aa11.79□□□□□ -0.52
TMEM39A-207ENST00000482162 LRRCC1Q9C099 1032 aa11.79□□□□□ -0.52
TMEM39A-207ENST00000482162 BOLA2Q9H3K6 86 aa11.79□□□□□ -0.52
TMEM39A-207ENST00000482162 PAG1Q9NWQ8 432 aa11.79□□□□□ -0.52
TMEM39A-207ENST00000482162 GJD2Q9UKL4 321 aa11.79□□□□□ -0.52
TMEM39A-207ENST00000482162 GABRQQ9UN88 632 aa11.79□□□□□ -0.52
TMEM39A-207ENST00000482162 MYPNQ86TC9 1320 aa11.79□□□□□ -0.52
TMEM39A-207ENST00000482162 DOCK3Q8IZD9 2030 aa11.79□□□□□ -0.52
TMEM39A-207ENST00000482162 CENPFP49454 3210 aa11.79□□□□□ -0.52
TMEM39A-207ENST00000482162 USP17L10C9JJH3 530 aa11.78□□□□□ -0.52
TMEM39A-207ENST00000482162 GH2P01242 217 aa11.78□□□□□ -0.52
TMEM39A-207ENST00000482162 FLT3LGP49771 235 aa11.78□□□□□ -0.52
TMEM39A-207ENST00000482162 UBE3CQ15386 1083 aa11.78□□□□□ -0.52
TMEM39A-207ENST00000482162 UBE2Q1Q7Z7E8 422 aa11.78□□□□□ -0.52
TMEM39A-207ENST00000482162 CRNKL1Q9BZJ0 848 aaKnown RBP11.78□□□□□ -0.52
TMEM39A-207ENST00000482162 KIAA1683Q9H0B3 1180 aa11.78□□□□□ -0.52
TMEM39A-207ENST00000482162 DCP1AQ9NPI6 582 aaPredicted RBP11.78□□□□□ -0.52
TMEM39A-207ENST00000482162 ATAD5Q96QE3 1844 aa11.77□□□□□ -0.52
TMEM39A-207ENST00000482162 GDF11O95390 407 aa11.77□□□□□ -0.53
TMEM39A-207ENST00000482162 GJB1P08034 283 aa11.77□□□□□ -0.53
TMEM39A-207ENST00000482162 GUCY1A2P33402 732 aa11.77□□□□□ -0.53
TMEM39A-207ENST00000482162 MTFR1Q15390 333 aa11.77□□□□□ -0.53
TMEM39A-207ENST00000482162 CERKLQ49MI3 558 aaPredicted RBP11.77□□□□□ -0.53
TMEM39A-207ENST00000482162 LCORLQ8N3X6 602 aa11.77□□□□□ -0.53
TMEM39A-207ENST00000482162 SLAIN1Q8ND83 568 aa11.77□□□□□ -0.53
TMEM39A-207ENST00000482162 RAET1EQ8TD07 263 aa11.77□□□□□ -0.53
TMEM39A-207ENST00000482162 DNAJC2Q99543 621 aaKnown RBP11.77□□□□□ -0.53
TMEM39A-207ENST00000482162 P2RX7Q99572 595 aaKnown RBP11.77□□□□□ -0.53
TMEM39A-207ENST00000482162 ECHDC1Q9NTX5 307 aa11.77□□□□□ -0.53
TMEM39A-207ENST00000482162 RBPJLQ9UBG7 517 aa11.77□□□□□ -0.53
TMEM39A-207ENST00000482162 PCDHB15Q9Y5E8 787 aa11.77□□□□□ -0.53
TMEM39A-207ENST00000482162 MYH1P12882 1939 aa11.77□□□□□ -0.53
TMEM39A-207ENST00000482162 MGAMO43451 1857 aa11.76□□□□□ -0.53
TMEM39A-207ENST00000482162 TNPO2O14787 897 aaKnown RBP11.76□□□□□ -0.53
TMEM39A-207ENST00000482162 SMARCA5O60264 1052 aaPredicted RBP11.76□□□□□ -0.53
TMEM39A-207ENST00000482162 ADCY3O60266 1144 aa11.76□□□□□ -0.53
TMEM39A-207ENST00000482162 EVX2Q03828 476 aa11.76□□□□□ -0.53
TMEM39A-207ENST00000482162 SLFNL1Q499Z3 407 aa11.76□□□□□ -0.53
TMEM39A-207ENST00000482162 USP17L2Q6R6M4 530 aa11.76□□□□□ -0.53
TMEM39A-207ENST00000482162 SHISA4Q96DD7 197 aa11.76□□□□□ -0.53
TMEM39A-207ENST00000482162 TRIM34Q9BYJ4 488 aa11.76□□□□□ -0.53
TMEM39A-207ENST00000482162 ATP8A2Q9NTI2 1148 aa11.76□□□□□ -0.53
TMEM39A-207ENST00000482162 TMOD4Q9NZQ9 345 aa11.76□□□□□ -0.53
TMEM39A-207ENST00000482162 DDX60LQ5H9U9 1706 aaKnown RBP11.76□□□□□ -0.53
TMEM39A-207ENST00000482162 MKI67P46013 3256 aaKnown RBP11.75□□□□□ -0.53
TMEM39A-207ENST00000482162 PRKAB2O43741 272 aa11.75□□□□□ -0.53
TMEM39A-207ENST00000482162 ECM2O94769 699 aaPredicted RBP11.75□□□□□ -0.53
TMEM39A-207ENST00000482162 CHGBP05060 677 aa11.75□□□□□ -0.53
TMEM39A-207ENST00000482162 POLR3DP05423 398 aaPredicted RBP11.75□□□□□ -0.53
TMEM39A-207ENST00000482162 CCL5P13501 91 aa11.75□□□□□ -0.53
TMEM39A-207ENST00000482162 CAPN2P17655 700 aa11.75□□□□□ -0.53
TMEM39A-207ENST00000482162 GJA8P48165 433 aa11.75□□□□□ -0.53
TMEM39A-207ENST00000482162 HERVK_113P62684 666 aa11.75□□□□□ -0.53
TMEM39A-207ENST00000482162 ABCB5Q2M3G0 1257 aa11.75□□□□□ -0.53
TMEM39A-207ENST00000482162 SLC4A8Q2Y0W8 1093 aa11.75□□□□□ -0.53
TMEM39A-207ENST00000482162 LBX2Q6XYB7 198 aa11.75□□□□□ -0.53
TMEM39A-207ENST00000482162 SIAH1Q8IUQ4 282 aa11.75□□□□□ -0.53
TMEM39A-207ENST00000482162 ACER1Q8TDN7 264 aa11.75□□□□□ -0.53
TMEM39A-207ENST00000482162 SDR42E1Q8WUS8 393 aa11.75□□□□□ -0.53
TMEM39A-207ENST00000482162 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.75□□□□□ -0.53
TMEM39A-207ENST00000482162 ARMT1Q9H993 441 aa11.75□□□□□ -0.53
TMEM39A-207ENST00000482162 TXNRD2Q9NNW7 524 aa11.75□□□□□ -0.53
TMEM39A-207ENST00000482162 MCM9Q9NXL9 1143 aa11.75□□□□□ -0.53
TMEM39A-207ENST00000482162 MBD4O95243 580 aa11.74□□□□□ -0.53
TMEM39A-207ENST00000482162 CYP2D6P10635 497 aa11.74□□□□□ -0.53
TMEM39A-207ENST00000482162 IRX3P78415 501 aaPredicted RBP11.74□□□□□ -0.53
TMEM39A-207ENST00000482162 MAPK8IP2Q13387 824 aaPredicted RBP11.74□□□□□ -0.53
TMEM39A-207ENST00000482162 C12orf60Q5U649 245 aa11.74□□□□□ -0.53
TMEM39A-207ENST00000482162 CATSPERGQ6ZRH7 1159 aa11.74□□□□□ -0.53
TMEM39A-207ENST00000482162 GPRC5AQ8NFJ5 357 aa11.74□□□□□ -0.53
TMEM39A-207ENST00000482162 NKX2-3Q8TAU0 364 aa11.74□□□□□ -0.53
TMEM39A-207ENST00000482162 GTF3C2Q8WUA4 911 aaPredicted RBP11.74□□□□□ -0.53
TMEM39A-207ENST00000482162 USP6NLQ92738 828 aa11.74□□□□□ -0.53
TMEM39A-207ENST00000482162 COA7Q96BR5 231 aa11.74□□□□□ -0.53
TMEM39A-207ENST00000482162 PAK6Q9NQU5 681 aaPredicted RBP11.74□□□□□ -0.53
TMEM39A-207ENST00000482162 SWAP70Q9UH65 585 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms