RNA–Protein interactions for RNA: ENST00000479162.5

NUP35-209, Transcript of nucleoporin 35, humanhuman

TSL 2

Gene NUP35, Length 2,828 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35-209ENST00000479162 XRN1Q8IZH2 1706 aaKnown RBP11.79□□□□□ -0.52
NUP35-209ENST00000479162 TMEM110-MUSTN1A8MSY1 372 aa11.78□□□□□ -0.52
NUP35-209ENST00000479162 LDHAP00338 332 aaKnown RBP11.78□□□□□ -0.52
NUP35-209ENST00000479162 COBLL1Q53SF7 1204 aa11.78□□□□□ -0.52
NUP35-209ENST00000479162 TMCO5AQ8N6Q1 288 aa11.78□□□□□ -0.52
NUP35-209ENST00000479162 GCC1Q96CN9 775 aa11.78□□□□□ -0.52
NUP35-209ENST00000479162 OXCT1P55809 520 aa11.78□□□□□ -0.52
NUP35-209ENST00000479162 NUCB1Q02818 461 aa11.78□□□□□ -0.52
NUP35-209ENST00000479162 CCDC121Q6ZUS5 278 aa11.78□□□□□ -0.52
NUP35-209ENST00000479162 HDXQ7Z353 690 aa11.78□□□□□ -0.52
NUP35-209ENST00000479162 C14orf80Q86SX3 495 aa11.78□□□□□ -0.52
NUP35-209ENST00000479162 THEMISQ8N1K5 641 aaPredicted RBP11.78□□□□□ -0.52
NUP35-209ENST00000479162 CACTINQ8WUQ7 758 aaKnown RBP11.78□□□□□ -0.52
NUP35-209ENST00000479162 LZICQ8WZA0 190 aa11.78□□□□□ -0.52
NUP35-209ENST00000479162 ACSBG1Q96GR2 724 aa11.78□□□□□ -0.52
NUP35-209ENST00000479162 MPHOSPH9Q99550 1183 aa11.78□□□□□ -0.52
NUP35-209ENST00000479162 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.78□□□□□ -0.52
NUP35-209ENST00000479162 DMRT2Q9Y5R5 561 aa11.78□□□□□ -0.52
NUP35-209ENST00000479162 LINGO3P0C6S8 592 aa11.78□□□□□ -0.52
NUP35-209ENST00000479162 SNW1Q13573 536 aaKnown RBP11.78□□□□□ -0.52
NUP35-209ENST00000479162 ARHGEF6Q15052 776 aa11.78□□□□□ -0.52
NUP35-209ENST00000479162 KANK3Q6NY19 840 aa11.78□□□□□ -0.52
NUP35-209ENST00000479162 HVCN1Q96D96 273 aa11.78□□□□□ -0.52
NUP35-209ENST00000479162 UBE2OQ9C0C9 1292 aaKnown RBP11.78□□□□□ -0.52
NUP35-209ENST00000479162 NRDE2Q9H7Z3 1164 aa11.78□□□□□ -0.52
NUP35-209ENST00000479162 KCND1Q9NSA2 647 aa11.78□□□□□ -0.52
NUP35-209ENST00000479162 CHD2O14647 1828 aaKnown RBP11.77□□□□□ -0.52
NUP35-209ENST00000479162 CCSAPQ6IQ19 270 aaPredicted RBP11.77□□□□□ -0.53
NUP35-209ENST00000479162 LMNTD2Q8IXW0 634 aa11.77□□□□□ -0.53
NUP35-209ENST00000479162 FAM204AQ9H8W3 233 aa11.77□□□□□ -0.53
NUP35-209ENST00000479162 MAP3K20Q9NYL2 800 aaKnown RBP11.77□□□□□ -0.53
NUP35-209ENST00000479162 MAP3K5Q99683 1374 aa11.77□□□□□ -0.53
NUP35-209ENST00000479162 RPAP1Q9BWH6 1393 aaPredicted RBP11.77□□□□□ -0.53
NUP35-209ENST00000479162 CCDC151A5D8V7 595 aa11.77□□□□□ -0.53
NUP35-209ENST00000479162 TCF7P36402 384 aaPredicted RBP11.77□□□□□ -0.53
NUP35-209ENST00000479162 EVCP57679 992 aa11.77□□□□□ -0.53
NUP35-209ENST00000479162 NBPF14Q5TI25 921 aa11.77□□□□□ -0.53
NUP35-209ENST00000479162 CREB3L3Q68CJ9 461 aa11.77□□□□□ -0.53
NUP35-209ENST00000479162 B4GALNT4Q76KP1 1039 aa11.77□□□□□ -0.53
NUP35-209ENST00000479162 APLFQ8IW19 511 aaPredicted RBP11.77□□□□□ -0.53
NUP35-209ENST00000479162 CCAR2Q8N163 923 aaKnown RBP11.77□□□□□ -0.53
NUP35-209ENST00000479162 CCDC82Q8N4S0 544 aa11.77□□□□□ -0.53
NUP35-209ENST00000479162 PDILTQ8N807 584 aa11.77□□□□□ -0.53
NUP35-209ENST00000479162 AFAP1L1Q8TED9 768 aa11.77□□□□□ -0.53
NUP35-209ENST00000479162 DYDC1Q8WWB3 177 aa11.77□□□□□ -0.53
NUP35-209ENST00000479162 IWS1Q96ST2 819 aa11.77□□□□□ -0.53
NUP35-209ENST00000479162 ATXN10Q9UBB4 475 aa11.77□□□□□ -0.53
NUP35-209ENST00000479162 NKTRP30414 1462 aaKnown RBP11.76□□□□□ -0.53
NUP35-209ENST00000479162 PENKP01210 267 aaPredicted RBP11.76□□□□□ -0.53
NUP35-209ENST00000479162 ITIH3Q06033 890 aa11.76□□□□□ -0.53
NUP35-209ENST00000479162 PDE3AQ14432 1141 aa11.76□□□□□ -0.53
NUP35-209ENST00000479162 BRD3Q15059 726 aa11.76□□□□□ -0.53
NUP35-209ENST00000479162 PPP1R15BQ5SWA1 713 aa11.76□□□□□ -0.53
NUP35-209ENST00000479162 ILDR1Q86SU0 546 aaPredicted RBP11.76□□□□□ -0.53
NUP35-209ENST00000479162 VCX3BQ9H321 246 aa11.76□□□□□ -0.53
NUP35-209ENST00000479162 KIAA1468Q9P260 1216 aa11.76□□□□□ -0.53
NUP35-209ENST00000479162 GOLGA6L4A6NEF3 574 aa11.76□□□□□ -0.53
NUP35-209ENST00000479162 TBKBP1A7MCY6 615 aa11.76□□□□□ -0.53
NUP35-209ENST00000479162 SART1O43290 800 aaKnown RBP11.76□□□□□ -0.53
NUP35-209ENST00000479162 TMCC1O94876 653 aa11.76□□□□□ -0.53
NUP35-209ENST00000479162 PDHBP11177 359 aa11.76□□□□□ -0.53
NUP35-209ENST00000479162 BCRP11274 1271 aa11.76□□□□□ -0.53
NUP35-209ENST00000479162 IDO1P14902 403 aa11.76□□□□□ -0.53
NUP35-209ENST00000479162 MX1P20591 662 aa11.76□□□□□ -0.53
NUP35-209ENST00000479162 HOXD12P35452 270 aa11.76□□□□□ -0.53
NUP35-209ENST00000479162 GNAQP50148 359 aa11.76□□□□□ -0.53
NUP35-209ENST00000479162 CNGA3Q16281 694 aa11.76□□□□□ -0.53
NUP35-209ENST00000479162 PREBQ9HCU5 417 aa11.76□□□□□ -0.53
NUP35-209ENST00000479162 ZDHHC9Q9Y397 364 aa11.76□□□□□ -0.53
NUP35-209ENST00000479162 NPHP4O75161 1426 aaPredicted RBP11.76□□□□□ -0.53
NUP35-209ENST00000479162 RIMS2Q9UQ26 1411 aa11.76□□□□□ -0.53
NUP35-209ENST00000479162 LTBP4Q8N2S1 1624 aa11.75□□□□□ -0.53
NUP35-209ENST00000479162 TROVE2P10155 538 aaKnown RBP eCLIP11.75□□□□□ -0.53
NUP35-209ENST00000479162 PRKAR2BP31323 418 aa11.75□□□□□ -0.53
NUP35-209ENST00000479162 TRIM29Q14134 588 aa11.75□□□□□ -0.53
NUP35-209ENST00000479162 PABPC1LQ4VXU2 614 aaKnown RBP11.75□□□□□ -0.53
NUP35-209ENST00000479162 ZNF280CQ8ND82 737 aa11.75□□□□□ -0.53
NUP35-209ENST00000479162 DHX36Q9H2U1 1008 aaKnown RBP11.75□□□□□ -0.53
NUP35-209ENST00000479162 VCPKMTQ9H867 229 aa11.75□□□□□ -0.53
NUP35-209ENST00000479162 TBCAO75347 108 aaKnown RBP11.75□□□□□ -0.53
NUP35-209ENST00000479162 ATP4AP20648 1035 aa11.75□□□□□ -0.53
NUP35-209ENST00000479162 WHAMMP3Q1A5X7 153 aa11.75□□□□□ -0.53
NUP35-209ENST00000479162 MEX3CQ5U5Q3 659 aaKnown RBP11.75□□□□□ -0.53
NUP35-209ENST00000479162 FAM117BQ6P1L5 589 aa11.75□□□□□ -0.53
NUP35-209ENST00000479162 DCLK2Q8N568 766 aa11.75□□□□□ -0.53
NUP35-209ENST00000479162 NR1H4Q96RI1 486 aaPredicted RBP11.75□□□□□ -0.53
NUP35-209ENST00000479162 NACAP1Q9BZK3 213 aa11.75□□□□□ -0.53
NUP35-209ENST00000479162 KLF15Q9UIH9 416 aa11.75□□□□□ -0.53
NUP35-209ENST00000479162 CARD8Q9Y2G2 431 aa11.75□□□□□ -0.53
NUP35-209ENST00000479162 BLMP54132 1417 aaPredicted RBP11.75□□□□□ -0.53
NUP35-209ENST00000479162 A6NHS1 94 aa11.74□□□□□ -0.53
NUP35-209ENST00000479162 FUT4P22083 530 aa11.74□□□□□ -0.53
NUP35-209ENST00000479162 CCT8P50990 548 aa11.74□□□□□ -0.53
NUP35-209ENST00000479162 HDGFP51858 240 aaKnown RBP11.74□□□□□ -0.53
NUP35-209ENST00000479162 KIF11P52732 1056 aa11.74□□□□□ -0.53
NUP35-209ENST00000479162 RSPH3Q86UC2 560 aa11.74□□□□□ -0.53
NUP35-209ENST00000479162 NSMCE1Q8WV22 266 aa11.74□□□□□ -0.53
NUP35-209ENST00000479162 OPTNQ96CV9 577 aa11.74□□□□□ -0.53
NUP35-209ENST00000479162 USP26Q9BXU7 913 aa11.74□□□□□ -0.53
NUP35-209ENST00000479162 SLC40A1Q9NP59 571 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms