RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 KRT26Q7Z3Y9 468 aa15.49■□□□□ 0.07
CHD3-210ENST00000479080 CLEC10AQ8IUN9 316 aa15.49■□□□□ 0.07
CHD3-210ENST00000479080 CDCA5Q96FF9 252 aa15.49■□□□□ 0.07
CHD3-210ENST00000479080 ZKSCAN3Q9BRR0 538 aa15.49■□□□□ 0.07
CHD3-210ENST00000479080 KRT23Q9C075 422 aa15.49■□□□□ 0.07
CHD3-210ENST00000479080 CNNM2Q9H8M5 875 aa15.49■□□□□ 0.07
CHD3-210ENST00000479080 IL17RBQ9NRM6 502 aa15.49■□□□□ 0.07
CHD3-210ENST00000479080 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.49■□□□□ 0.07
CHD3-210ENST00000479080 SWAP70Q9UH65 585 aa15.49■□□□□ 0.07
CHD3-210ENST00000479080 HERC5Q9UII4 1024 aaKnown RBP15.49■□□□□ 0.07
CHD3-210ENST00000479080 CYP46A1Q9Y6A2 500 aa15.49■□□□□ 0.07
CHD3-210ENST00000479080 POLR2AP24928 1970 aaKnown RBP15.49■□□□□ 0.07
CHD3-210ENST00000479080 WDR19Q8NEZ3 1342 aa15.48■□□□□ 0.07
CHD3-210ENST00000479080 TRAF5O00463 557 aa15.48■□□□□ 0.07
CHD3-210ENST00000479080 RANBP6O60518 1105 aaKnown RBP15.48■□□□□ 0.07
CHD3-210ENST00000479080 GDF11O95390 407 aa15.48■□□□□ 0.07
CHD3-210ENST00000479080 LARGE1O95461 756 aa15.48■□□□□ 0.07
CHD3-210ENST00000479080 PSMA5P28066 241 aa15.48■□□□□ 0.07
CHD3-210ENST00000479080 NOVP48745 357 aa15.48■□□□□ 0.07
CHD3-210ENST00000479080 AK2P54819 239 aa15.48■□□□□ 0.07
CHD3-210ENST00000479080 TFAP4Q01664 338 aa15.48■□□□□ 0.07
CHD3-210ENST00000479080 RCSD1Q6JBY9 416 aa15.48■□□□□ 0.07
CHD3-210ENST00000479080 RALYLQ86SE5 291 aaKnown RBP15.48■□□□□ 0.07
CHD3-210ENST00000479080 LDHDQ86WU2 507 aa15.48■□□□□ 0.07
CHD3-210ENST00000479080 NEDD1Q8NHV4 660 aa15.48■□□□□ 0.07
CHD3-210ENST00000479080 IGDCC4Q8TDY8 1250 aa15.48■□□□□ 0.07
CHD3-210ENST00000479080 LARP6Q9BRS8 491 aaKnown RBP15.48■□□□□ 0.07
CHD3-210ENST00000479080 TOMM22Q9NS69 142 aa15.48■□□□□ 0.07
CHD3-210ENST00000479080 SLC3A2P08195 630 aaKnown RBP15.47■□□□□ 0.07
CHD3-210ENST00000479080 ST3GAL1Q11201 340 aa15.47■□□□□ 0.07
CHD3-210ENST00000479080 Q6ZUG5 572 aa15.47■□□□□ 0.07
CHD3-210ENST00000479080 SULF1Q8IWU6 871 aa15.47■□□□□ 0.07
CHD3-210ENST00000479080 CRACR2BQ8N4Y2 399 aaPredicted RBP15.47■□□□□ 0.07
CHD3-210ENST00000479080 ESR2Q92731 530 aa15.47■□□□□ 0.07
CHD3-210ENST00000479080 ALDH8A1Q9H2A2 487 aaPredicted RBP15.47■□□□□ 0.07
CHD3-210ENST00000479080 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.47■□□□□ 0.07
CHD3-210ENST00000479080 LY9Q9HBG7 655 aa15.47■□□□□ 0.07
CHD3-210ENST00000479080 MKNK2Q9HBH9 465 aa15.47■□□□□ 0.07
CHD3-210ENST00000479080 PDRG1Q9NUG6 133 aa15.47■□□□□ 0.07
CHD3-210ENST00000479080 ZNF112Q9UJU3 913 aa15.47■□□□□ 0.07
CHD3-210ENST00000479080 TNKSO95271 1327 aa15.46■□□□□ 0.07
CHD3-210ENST00000479080 OTOFQ9HC10 1997 aa15.46■□□□□ 0.07
CHD3-210ENST00000479080 HMGB1P09429 215 aaKnown RBP15.46■□□□□ 0.07
CHD3-210ENST00000479080 MCM5P33992 734 aa15.46■□□□□ 0.07
CHD3-210ENST00000479080 TRDNQ13061 729 aa15.46■□□□□ 0.07
CHD3-210ENST00000479080 CDC37L1Q7L3B6 337 aa15.46■□□□□ 0.07
CHD3-210ENST00000479080 SIAH1Q8IUQ4 282 aa15.46■□□□□ 0.07
CHD3-210ENST00000479080 FBXL16Q8N461 479 aa15.46■□□□□ 0.07
CHD3-210ENST00000479080 ENAHQ8N8S7 591 aaPredicted RBP15.46■□□□□ 0.07
CHD3-210ENST00000479080 TAOK2Q9UL54 1235 aa15.46■□□□□ 0.07
CHD3-210ENST00000479080 CLEC11AQ9Y240 323 aa15.46■□□□□ 0.07
CHD3-210ENST00000479080 TSPY2A6NKD2 308 aa15.45■□□□□ 0.06
CHD3-210ENST00000479080 USP2O75604 605 aaPredicted RBP15.45■□□□□ 0.06
CHD3-210ENST00000479080 INPP5BP32019 993 aa15.45■□□□□ 0.06
CHD3-210ENST00000479080 MOB2Q70IA6 237 aa15.45■□□□□ 0.06
CHD3-210ENST00000479080 CCDC84Q86UT8 332 aaPredicted RBP15.45■□□□□ 0.06
CHD3-210ENST00000479080 BRF1Q92994 677 aa15.45■□□□□ 0.06
CHD3-210ENST00000479080 SNX21Q969T3 373 aa15.45■□□□□ 0.06
CHD3-210ENST00000479080 TBC1D2Q9BYX2 928 aa15.45■□□□□ 0.06
CHD3-210ENST00000479080 TCP11L1Q9NUJ3 509 aa15.45■□□□□ 0.06
CHD3-210ENST00000479080 BRPF3Q9ULD4 1205 aa15.45■□□□□ 0.06
CHD3-210ENST00000479080 TPCN1Q9ULQ1 816 aa15.45■□□□□ 0.06
CHD3-210ENST00000479080 ITGBL1O95965 494 aaPredicted RBP15.44■□□□□ 0.06
CHD3-210ENST00000479080 GH2P01242 217 aa15.44■□□□□ 0.06
CHD3-210ENST00000479080 CAP2P40123 477 aa15.44■□□□□ 0.06
CHD3-210ENST00000479080 APOBRQ0VD83 1088 aa15.44■□□□□ 0.06
CHD3-210ENST00000479080 SEPT2Q15019 361 aa15.44■□□□□ 0.06
CHD3-210ENST00000479080 CERKLQ49MI3 558 aaPredicted RBP15.44■□□□□ 0.06
CHD3-210ENST00000479080 NOL8Q76FK4 1167 aaKnown RBP15.44■□□□□ 0.06
CHD3-210ENST00000479080 RASGRP2Q7LDG7 609 aa15.44■□□□□ 0.06
CHD3-210ENST00000479080 ZNF444Q8N0Y2 327 aaPredicted RBP15.44■□□□□ 0.06
CHD3-210ENST00000479080 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.44■□□□□ 0.06
CHD3-210ENST00000479080 KLRG1Q96E93 195 aa15.44■□□□□ 0.06
CHD3-210ENST00000479080 CEP95Q96GE4 821 aa15.44■□□□□ 0.06
CHD3-210ENST00000479080 ZSCAN10Q96SZ4 725 aaPredicted RBP15.44■□□□□ 0.06
CHD3-210ENST00000479080 ZNF341Q9BYN7 854 aa15.44■□□□□ 0.06
CHD3-210ENST00000479080 ZBTB21Q9ULJ3 1066 aa15.44■□□□□ 0.06
CHD3-210ENST00000479080 MYH8P13535 1937 aa15.44■□□□□ 0.06
CHD3-210ENST00000479080 IFIT3O14879 490 aaKnown RBP15.43■□□□□ 0.06
CHD3-210ENST00000479080 TSPY3P0CV98 308 aa15.43■□□□□ 0.06
CHD3-210ENST00000479080 TSPY8P0CW00 308 aa15.43■□□□□ 0.06
CHD3-210ENST00000479080 EVCP57679 992 aa15.43■□□□□ 0.06
CHD3-210ENST00000479080 PRKG1Q13976 671 aa15.43■□□□□ 0.06
CHD3-210ENST00000479080 ABCB5Q2M3G0 1257 aa15.43■□□□□ 0.06
CHD3-210ENST00000479080 SGMS1Q86VZ5 419 aa15.43■□□□□ 0.06
CHD3-210ENST00000479080 ANKS1AQ92625 1134 aa15.43■□□□□ 0.06
CHD3-210ENST00000479080 TMEM87BQ96K49 555 aa15.43■□□□□ 0.06
CHD3-210ENST00000479080 CCDC17Q96LX7 622 aa15.43■□□□□ 0.06
CHD3-210ENST00000479080 MTA3Q9BTC8 594 aa15.43■□□□□ 0.06
CHD3-210ENST00000479080 GPBP1L1Q9HC44 474 aaPredicted RBP15.43■□□□□ 0.06
CHD3-210ENST00000479080 ANGEL1Q9UNK9 670 aaKnown RBP15.43■□□□□ 0.06
CHD3-210ENST00000479080 LIFRP42702 1097 aa15.42■□□□□ 0.06
CHD3-210ENST00000479080 NT5C2P49902 561 aa15.42■□□□□ 0.06
CHD3-210ENST00000479080 SUPT20HL1Q3ZLR7 823 aa15.42■□□□□ 0.06
CHD3-210ENST00000479080 TMEM67Q5HYA8 995 aa15.42■□□□□ 0.06
CHD3-210ENST00000479080 DCAF15Q66K64 600 aa15.42■□□□□ 0.06
CHD3-210ENST00000479080 CHADLQ6NUI6 762 aa15.42■□□□□ 0.06
CHD3-210ENST00000479080 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.42■□□□□ 0.06
CHD3-210ENST00000479080 RAB11FIP4Q86YS3 637 aa15.42■□□□□ 0.06
CHD3-210ENST00000479080 ZKSCAN4Q969J2 545 aaPredicted RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms