RNA–Protein interactions for RNA: ENST00000478958.5

LRRFIP1-211, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best)

Gene LRRFIP1, Length 2,869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-211ENST00000478958 A0A0U1RQJ8 604 aa12.54□□□□□ -0.4
LRRFIP1-211ENST00000478958 EFCAB8A8MWE9 144 aa12.54□□□□□ -0.4
LRRFIP1-211ENST00000478958 SH2B2O14492 632 aaPredicted RBP12.54□□□□□ -0.4
LRRFIP1-211ENST00000478958 IFIT3O14879 490 aaKnown RBP12.54□□□□□ -0.4
LRRFIP1-211ENST00000478958 COBLO75128 1261 aa12.54□□□□□ -0.4
LRRFIP1-211ENST00000478958 CDKL5O76039 1030 aa12.54□□□□□ -0.4
LRRFIP1-211ENST00000478958 CASP1P29466 404 aa12.54□□□□□ -0.4
LRRFIP1-211ENST00000478958 KCNJ6P48051 423 aa12.54□□□□□ -0.4
LRRFIP1-211ENST00000478958 CC2D1AQ6P1N0 951 aaPredicted RBP12.54□□□□□ -0.4
LRRFIP1-211ENST00000478958 USP49Q70CQ1 688 aa12.54□□□□□ -0.4
LRRFIP1-211ENST00000478958 TMEM139Q8IV31 216 aa12.54□□□□□ -0.4
LRRFIP1-211ENST00000478958 FBXL16Q8N461 479 aa12.54□□□□□ -0.4
LRRFIP1-211ENST00000478958 OTUD6BQ8N6M0 293 aa12.54□□□□□ -0.4
LRRFIP1-211ENST00000478958 ATRIPQ8WXE1 791 aa12.54□□□□□ -0.4
LRRFIP1-211ENST00000478958 DHX58Q96C10 678 aa12.54□□□□□ -0.4
LRRFIP1-211ENST00000478958 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.54□□□□□ -0.4
LRRFIP1-211ENST00000478958 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.54□□□□□ -0.4
LRRFIP1-211ENST00000478958 C19orf44Q9H6X5 657 aa12.54□□□□□ -0.4
LRRFIP1-211ENST00000478958 VPS18Q9P253 973 aa12.54□□□□□ -0.4
LRRFIP1-211ENST00000478958 ZNF532Q9HCE3 1301 aa12.54□□□□□ -0.4
LRRFIP1-211ENST00000478958 PPP6R2O75170 966 aa12.54□□□□□ -0.4
LRRFIP1-211ENST00000478958 CIAO1O76071 339 aa12.54□□□□□ -0.4
LRRFIP1-211ENST00000478958 ERLIN2O94905 339 aa12.54□□□□□ -0.4
LRRFIP1-211ENST00000478958 IRX1P78414 480 aaPredicted RBP12.54□□□□□ -0.4
LRRFIP1-211ENST00000478958 NR5A1Q13285 461 aa12.54□□□□□ -0.4
LRRFIP1-211ENST00000478958 KRI1Q8N9T8 703 aaKnown RBP12.54□□□□□ -0.4
LRRFIP1-211ENST00000478958 TACO1Q9BSH4 297 aaKnown RBP12.54□□□□□ -0.4
LRRFIP1-211ENST00000478958 SRRTQ9BXP5 876 aaKnown RBP12.54□□□□□ -0.4
LRRFIP1-211ENST00000478958 PUF60Q9UHX1 559 aaKnown RBP12.54□□□□□ -0.4
LRRFIP1-211ENST00000478958 MAN1B1Q9UKM7 699 aa12.54□□□□□ -0.4
LRRFIP1-211ENST00000478958 WWC3Q9ULE0 1092 aa12.54□□□□□ -0.4
LRRFIP1-211ENST00000478958 SLC12A7Q9Y666 1083 aa12.54□□□□□ -0.4
LRRFIP1-211ENST00000478958 HNRNPH1P31943 449 aaKnown RBP12.53□□□□□ -0.4
LRRFIP1-211ENST00000478958 POSTNQ15063 836 aa12.53□□□□□ -0.4
LRRFIP1-211ENST00000478958 TC2NQ8N9U0 490 aa12.53□□□□□ -0.4
LRRFIP1-211ENST00000478958 NUP133Q8WUM0 1156 aa12.53□□□□□ -0.4
LRRFIP1-211ENST00000478958 AIDAQ96BJ3 306 aa12.53□□□□□ -0.4
LRRFIP1-211ENST00000478958 FAXDC2Q96IV6 333 aa12.53□□□□□ -0.4
LRRFIP1-211ENST00000478958 PIH1D3Q9NQM4 214 aaKnown RBP12.53□□□□□ -0.4
LRRFIP1-211ENST00000478958 GNL3LQ9NVN8 582 aaKnown RBP12.53□□□□□ -0.4
LRRFIP1-211ENST00000478958 SOWAHDA6NJG2 315 aa12.53□□□□□ -0.4
LRRFIP1-211ENST00000478958 TFRCP02786 760 aaKnown RBP12.53□□□□□ -0.4
LRRFIP1-211ENST00000478958 AFMP43652 599 aa12.53□□□□□ -0.4
LRRFIP1-211ENST00000478958 SPECC1LQ69YQ0 1117 aa12.53□□□□□ -0.4
LRRFIP1-211ENST00000478958 DIS3L2Q8IYB7 885 aaKnown RBP12.53□□□□□ -0.4
LRRFIP1-211ENST00000478958 PARD6BQ9BYG5 372 aa12.53□□□□□ -0.4
LRRFIP1-211ENST00000478958 ARFGAP3Q9NP61 516 aa12.53□□□□□ -0.4
LRRFIP1-211ENST00000478958 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.53□□□□□ -0.42e-7■□□□□ 10.3
LRRFIP1-211ENST00000478958 AFDNP55196 1824 aaKnown RBP12.53□□□□□ -0.4
LRRFIP1-211ENST00000478958 C21orf2O43822 256 aa12.52□□□□□ -0.4
LRRFIP1-211ENST00000478958 CUTAO60888 179 aa12.52□□□□□ -0.4
LRRFIP1-211ENST00000478958 SSRP1Q08945 709 aaKnown RBP12.52□□□□□ -0.4
LRRFIP1-211ENST00000478958 TOM1L2Q6ZVM7 507 aa12.52□□□□□ -0.4
LRRFIP1-211ENST00000478958 ZNF513Q8N8E2 541 aaPredicted RBP12.52□□□□□ -0.4
LRRFIP1-211ENST00000478958 GREM2Q9H772 168 aa12.52□□□□□ -0.4
LRRFIP1-211ENST00000478958 USP54Q70EL1 1684 aa12.52□□□□□ -0.41
LRRFIP1-211ENST00000478958 hCG_1642624A0A1W2PR95 340 aa12.52□□□□□ -0.41
LRRFIP1-211ENST00000478958 H3BQF6 201 aa12.52□□□□□ -0.41
LRRFIP1-211ENST00000478958 TEX33O43247 280 aa12.52□□□□□ -0.41
LRRFIP1-211ENST00000478958 ADD2P35612 726 aa12.52□□□□□ -0.41
LRRFIP1-211ENST00000478958 EIF5P55010 431 aaKnown RBP12.52□□□□□ -0.41
LRRFIP1-211ENST00000478958 DHX8Q14562 1220 aaKnown RBP12.52□□□□□ -0.41
LRRFIP1-211ENST00000478958 NOSTRINQ8IVI9 506 aa12.52□□□□□ -0.41
LRRFIP1-211ENST00000478958 SMYD4Q8IYR2 804 aaPredicted RBP12.52□□□□□ -0.41
LRRFIP1-211ENST00000478958 MRPL44Q9H9J2 332 aaKnown RBP12.52□□□□□ -0.41
LRRFIP1-211ENST00000478958 SEC31BQ9NQW1 1179 aa12.52□□□□□ -0.41
LRRFIP1-211ENST00000478958 FAM217BQ9NTX9 383 aaPredicted RBP12.52□□□□□ -0.41
LRRFIP1-211ENST00000478958 ZSWIM5Q9P217 1185 aa12.52□□□□□ -0.41
LRRFIP1-211ENST00000478958 PCDHB6Q9Y5E3 794 aa12.52□□□□□ -0.41
LRRFIP1-211ENST00000478958 CPDO75976 1380 aa12.52□□□□□ -0.41
LRRFIP1-211ENST00000478958 TUBB4AP04350 444 aa12.52□□□□□ -0.41
LRRFIP1-211ENST00000478958 ITGA6P23229 1130 aa12.52□□□□□ -0.41
LRRFIP1-211ENST00000478958 PHKA1P46020 1223 aa12.52□□□□□ -0.41
LRRFIP1-211ENST00000478958 INHBEP58166 350 aa12.52□□□□□ -0.41
LRRFIP1-211ENST00000478958 SAFBQ15424 915 aaKnown RBP eCLIP12.52□□□□□ -0.41
LRRFIP1-211ENST00000478958 NTRK3Q16288 839 aa12.52□□□□□ -0.41
LRRFIP1-211ENST00000478958 FMNL3Q8IVF7 1028 aa12.52□□□□□ -0.41
LRRFIP1-211ENST00000478958 STAMQ92783 540 aa12.52□□□□□ -0.41
LRRFIP1-211ENST00000478958 MPHOSPH8Q99549 860 aa12.52□□□□□ -0.41
LRRFIP1-211ENST00000478958 JPH2Q9BR39 696 aaPredicted RBP12.52□□□□□ -0.41
LRRFIP1-211ENST00000478958 FAM107BQ9H098 131 aa12.52□□□□□ -0.41
LRRFIP1-211ENST00000478958 RGPD5Q99666 1765 aa12.51□□□□□ -0.41
LRRFIP1-211ENST00000478958 ERCC3P19447 782 aa12.51□□□□□ -0.41
LRRFIP1-211ENST00000478958 ELF1P32519 619 aa12.51□□□□□ -0.41
LRRFIP1-211ENST00000478958 TOB1P50616 345 aaPredicted RBP12.51□□□□□ -0.41
LRRFIP1-211ENST00000478958 MCM6Q14566 821 aa12.51□□□□□ -0.41
LRRFIP1-211ENST00000478958 JAKMIP3Q5VZ66 844 aa12.51□□□□□ -0.41
LRRFIP1-211ENST00000478958 IGDCC4Q8TDY8 1250 aa12.51□□□□□ -0.41
LRRFIP1-211ENST00000478958 LY9Q9HBG7 655 aa12.51□□□□□ -0.41
LRRFIP1-211ENST00000478958 PAX7P23759 505 aa12.51□□□□□ -0.41
LRRFIP1-211ENST00000478958 MAP3K9P80192 1104 aa12.51□□□□□ -0.41
LRRFIP1-211ENST00000478958 TCIRG1Q13488 830 aa12.51□□□□□ -0.41
LRRFIP1-211ENST00000478958 OXER1Q8TDS5 423 aa12.51□□□□□ -0.41
LRRFIP1-211ENST00000478958 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.51□□□□□ -0.41
LRRFIP1-211ENST00000478958 STAG1Q8WVM7 1258 aa12.51□□□□□ -0.41
LRRFIP1-211ENST00000478958 KAT2BQ92831 832 aa12.51□□□□□ -0.41
LRRFIP1-211ENST00000478958 MED15Q96RN5 788 aa12.51□□□□□ -0.41
LRRFIP1-211ENST00000478958 NAPBQ9H115 298 aa12.51□□□□□ -0.41
LRRFIP1-211ENST00000478958 VEZTQ9HBM0 779 aa12.51□□□□□ -0.41
LRRFIP1-211ENST00000478958 CABP5Q9NP86 173 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms