RNA–Protein interactions for RNA: ENST00000471697.1

SCN3A-207, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 4

Gene SCN3A, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-207ENST00000471697 GSX1Q9H4S2 264 aaPredicted RBP4.33□□□□□ -1.72
SCN3A-207ENST00000471697 DZANK1Q9NVP4 752 aa4.33□□□□□ -1.72
SCN3A-207ENST00000471697 TREHO43280 583 aa4.32□□□□□ -1.72
SCN3A-207ENST00000471697 PRPF40AO75400 957 aaKnown RBP4.32□□□□□ -1.72
SCN3A-207ENST00000471697 WDHD1O75717 1129 aaPredicted RBP4.32□□□□□ -1.72
SCN3A-207ENST00000471697 FGRP09769 529 aa4.32□□□□□ -1.72
SCN3A-207ENST00000471697 HOXA5P20719 270 aa4.32□□□□□ -1.72
SCN3A-207ENST00000471697 MCCP23508 829 aa4.32□□□□□ -1.72
SCN3A-207ENST00000471697 IKBKEQ14164 716 aa4.32□□□□□ -1.72
SCN3A-207ENST00000471697 DSC3Q14574 896 aa4.32□□□□□ -1.72
SCN3A-207ENST00000471697 ERICH6BQ5W0A0 696 aa4.32□□□□□ -1.72
SCN3A-207ENST00000471697 TMC7Q7Z402 723 aa4.32□□□□□ -1.72
SCN3A-207ENST00000471697 VN1R5Q7Z5H4 357 aa4.32□□□□□ -1.72
SCN3A-207ENST00000471697 VPS37DQ86XT2 251 aa4.32□□□□□ -1.72
SCN3A-207ENST00000471697 FAM9BQ8IZU0 186 aa4.32□□□□□ -1.72
SCN3A-207ENST00000471697 GTF3C2Q8WUA4 911 aaPredicted RBP4.32□□□□□ -1.72
SCN3A-207ENST00000471697 SENP7Q9BQF6 1050 aa4.32□□□□□ -1.72
SCN3A-207ENST00000471697 PCGF6Q9BYE7 350 aa4.32□□□□□ -1.72
SCN3A-207ENST00000471697 NRSN2Q9GZP1 204 aa4.32□□□□□ -1.72
SCN3A-207ENST00000471697 MKNK2Q9HBH9 465 aa4.32□□□□□ -1.72
SCN3A-207ENST00000471697 MRS2Q9HD23 443 aa4.32□□□□□ -1.72
SCN3A-207ENST00000471697 INPP5FQ9Y2H2 1132 aa4.32□□□□□ -1.72
SCN3A-207ENST00000471697 COMMD10Q9Y6G5 202 aa4.32□□□□□ -1.72
SCN3A-207ENST00000471697 EXOC5O00471 708 aa4.31□□□□□ -1.72
SCN3A-207ENST00000471697 NFIBO00712 420 aa4.31□□□□□ -1.72
SCN3A-207ENST00000471697 NPR3P17342 541 aa4.31□□□□□ -1.72
SCN3A-207ENST00000471697 GYS2P54840 703 aa4.31□□□□□ -1.72
SCN3A-207ENST00000471697 EVA1CP58658 441 aa4.31□□□□□ -1.72
SCN3A-207ENST00000471697 SERINC3Q13530 473 aa4.31□□□□□ -1.72
SCN3A-207ENST00000471697 UBE4AQ14139 1066 aa4.31□□□□□ -1.72
SCN3A-207ENST00000471697 ANGEL2Q5VTE6 544 aaKnown RBP4.31□□□□□ -1.72
SCN3A-207ENST00000471697 NBPF6Q5VWK0 638 aa4.31□□□□□ -1.72
SCN3A-207ENST00000471697 ZNF654Q8IZM8 581 aa4.31□□□□□ -1.72
SCN3A-207ENST00000471697 TMEM102Q8N9M5 508 aaPredicted RBP4.31□□□□□ -1.72
SCN3A-207ENST00000471697 JDP2Q8WYK2 163 aa4.31□□□□□ -1.72
SCN3A-207ENST00000471697 BSNDQ8WZ55 320 aa4.31□□□□□ -1.72
SCN3A-207ENST00000471697 LIN37Q96GY3 246 aaPredicted RBP4.31□□□□□ -1.72
SCN3A-207ENST00000471697 RNPC3Q96LT9 517 aaKnown RBP4.31□□□□□ -1.72
SCN3A-207ENST00000471697 NBPF4Q96M43 638 aa4.31□□□□□ -1.72
SCN3A-207ENST00000471697 FAM161BQ96MY7 647 aa4.31□□□□□ -1.72
SCN3A-207ENST00000471697 DUSP9Q99956 384 aaKnown RBP4.31□□□□□ -1.72
SCN3A-207ENST00000471697 CD320Q9NPF0 282 aa4.31□□□□□ -1.72
SCN3A-207ENST00000471697 DDX41Q9UJV9 622 aaKnown RBP4.31□□□□□ -1.72
SCN3A-207ENST00000471697 LDHBP07195 334 aaKnown RBP4.3□□□□□ -1.72
SCN3A-207ENST00000471697 RAB6AP20340 208 aa4.3□□□□□ -1.72
SCN3A-207ENST00000471697 RACK1P63244 317 aaKnown RBP4.3□□□□□ -1.72
SCN3A-207ENST00000471697 PLCB3Q01970 1234 aa4.3□□□□□ -1.72
SCN3A-207ENST00000471697 IFI16Q16666 785 aaKnown RBP4.3□□□□□ -1.72
SCN3A-207ENST00000471697 CCSAPQ6IQ19 270 aaPredicted RBP4.3□□□□□ -1.72
SCN3A-207ENST00000471697 PDE12Q6L8Q7 609 aaKnown RBP4.3□□□□□ -1.72
SCN3A-207ENST00000471697 ATCAYQ86WG3 371 aa4.3□□□□□ -1.72
SCN3A-207ENST00000471697 SLC39A13Q96H72 371 aa4.3□□□□□ -1.72
SCN3A-207ENST00000471697 JADE2Q9NQC1 790 aa4.3□□□□□ -1.72
SCN3A-207ENST00000471697 FAM105AQ9NUU6 356 aa4.3□□□□□ -1.72
SCN3A-207ENST00000471697 RNF19AQ9NV58 838 aa4.3□□□□□ -1.72
SCN3A-207ENST00000471697 GLI1P08151 1106 aa4.29□□□□□ -1.72
SCN3A-207ENST00000471697 MED14OSP0DP75 135 aa4.29□□□□□ -1.72
SCN3A-207ENST00000471697 ACPPP15309 386 aa4.29□□□□□ -1.72
SCN3A-207ENST00000471697 BDNFP23560 247 aa4.29□□□□□ -1.72
SCN3A-207ENST00000471697 CD96P40200 585 aa4.29□□□□□ -1.72
SCN3A-207ENST00000471697 PSMD2Q13200 908 aa4.29□□□□□ -1.72
SCN3A-207ENST00000471697 PDE3BQ13370 1112 aa4.29□□□□□ -1.72
SCN3A-207ENST00000471697 MTMR3Q13615 1198 aa4.29□□□□□ -1.72
SCN3A-207ENST00000471697 MAP9Q49MG5 647 aa4.29□□□□□ -1.72
SCN3A-207ENST00000471697 GPR152Q8TDT2 470 aa4.29□□□□□ -1.72
SCN3A-207ENST00000471697 IL17RAQ96F46 866 aa4.29□□□□□ -1.72
SCN3A-207ENST00000471697 HRASLS5Q96KN8 279 aa4.29□□□□□ -1.72
SCN3A-207ENST00000471697 CITED4Q96RK1 184 aa4.29□□□□□ -1.72
SCN3A-207ENST00000471697 APBA2Q99767 749 aa4.29□□□□□ -1.72
SCN3A-207ENST00000471697 IER2Q9BTL4 223 aa4.29□□□□□ -1.72
SCN3A-207ENST00000471697 STIM2Q9P246 746 aa4.29□□□□□ -1.72
SCN3A-207ENST00000471697 VTI1BQ9UEU0 232 aa4.29□□□□□ -1.72
SCN3A-207ENST00000471697 TCEAL9Q9UHQ7 104 aa4.29□□□□□ -1.72
SCN3A-207ENST00000471697 TTF2Q9UNY4 1162 aaKnown RBP4.29□□□□□ -1.72
SCN3A-207ENST00000471697 CTNND2Q9UQB3 1225 aa4.29□□□□□ -1.72
SCN3A-207ENST00000471697 CCDC189A1A4V9 331 aa4.28□□□□□ -1.72
SCN3A-207ENST00000471697 NPIPB6E9PJ23 425 aa4.28□□□□□ -1.72
SCN3A-207ENST00000471697 KIF3BO15066 747 aa4.28□□□□□ -1.72
SCN3A-207ENST00000471697 DYNC1LI2O43237 492 aaPredicted RBP4.28□□□□□ -1.72
SCN3A-207ENST00000471697 ATF4P18848 351 aaPredicted RBP4.28□□□□□ -1.72
SCN3A-207ENST00000471697 LIG1P18858 919 aa4.28□□□□□ -1.72
SCN3A-207ENST00000471697 ZAP70P43403 619 aa4.28□□□□□ -1.72
SCN3A-207ENST00000471697 GJA8P48165 433 aa4.28□□□□□ -1.72
SCN3A-207ENST00000471697 KRTAP10-2P60368 255 aa4.28□□□□□ -1.72
SCN3A-207ENST00000471697 PTPN12Q05209 780 aaKnown RBP4.28□□□□□ -1.72
SCN3A-207ENST00000471697 KCNA10Q16322 511 aa4.28□□□□□ -1.72
SCN3A-207ENST00000471697 AOC3Q16853 763 aa4.28□□□□□ -1.72
SCN3A-207ENST00000471697 GLIPR1L2Q4G1C9 344 aa4.28□□□□□ -1.72
SCN3A-207ENST00000471697 WDR78Q5VTH9 848 aa4.28□□□□□ -1.72
SCN3A-207ENST00000471697 CIAPIN1Q6FI81 312 aa4.28□□□□□ -1.72
SCN3A-207ENST00000471697 PRR23BQ6ZRT6 265 aa4.28□□□□□ -1.72
SCN3A-207ENST00000471697 AMOTL1Q8IY63 956 aa4.28□□□□□ -1.72
SCN3A-207ENST00000471697 FBXO15Q8NCQ5 510 aaPredicted RBP4.28□□□□□ -1.72
SCN3A-207ENST00000471697 NXPE3Q969Y0 559 aa4.28□□□□□ -1.72
SCN3A-207ENST00000471697 HHIPQ96QV1 700 aa4.28□□□□□ -1.72
SCN3A-207ENST00000471697 ANP32EQ9BTT0 268 aa4.28□□□□□ -1.72
SCN3A-207ENST00000471697 ELP3Q9H9T3 547 aa4.28□□□□□ -1.72
SCN3A-207ENST00000471697 KANSL3Q9P2N6 904 aa4.28□□□□□ -1.72
SCN3A-207ENST00000471697 SWAP70Q9UH65 585 aa4.28□□□□□ -1.72
SCN3A-207ENST00000471697 FBXO9Q9UK97 447 aaPredicted RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms