RNA–Protein interactions for RNA: ENST00000469302.1

TUBGCP3-205, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 2

Gene TUBGCP3, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-205ENST00000469302 HOXA7P31268 230 aaPredicted RBP10.93□□□□□ -0.66
TUBGCP3-205ENST00000469302 ERVK-9P63128 1117 aa10.93□□□□□ -0.66
TUBGCP3-205ENST00000469302 ERVK-24P63145 666 aa10.93□□□□□ -0.66
TUBGCP3-205ENST00000469302 MAP2K5Q13163 448 aa10.93□□□□□ -0.66
TUBGCP3-205ENST00000469302 SNX17Q15036 470 aa10.93□□□□□ -0.66
TUBGCP3-205ENST00000469302 RABL6Q3YEC7 729 aaPredicted RBP10.93□□□□□ -0.66
TUBGCP3-205ENST00000469302 ZNF576Q9H609 170 aa10.93□□□□□ -0.66
TUBGCP3-205ENST00000469302 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.93□□□□□ -0.662e-6■■■■■ 35.9
TUBGCP3-205ENST00000469302 TXNRD2Q9NNW7 524 aa10.93□□□□□ -0.66
TUBGCP3-205ENST00000469302 DDX4Q9NQI0 724 aaKnown RBP10.93□□□□□ -0.66
TUBGCP3-205ENST00000469302 TMOD4Q9NZQ9 345 aa10.93□□□□□ -0.66
TUBGCP3-205ENST00000469302 REV3LO60673 3130 aa10.93□□□□□ -0.66
TUBGCP3-205ENST00000469302 SMCHD1A6NHR9 2005 aa10.92□□□□□ -0.66
TUBGCP3-205ENST00000469302 BRWD1Q9NSI6 2320 aa10.92□□□□□ -0.66
TUBGCP3-205ENST00000469302 TRANK1O15050 2925 aa10.92□□□□□ -0.66
TUBGCP3-205ENST00000469302 CDK5RAP2Q96SN8 1893 aa10.92□□□□□ -0.66
TUBGCP3-205ENST00000469302 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.92□□□□□ -0.66
TUBGCP3-205ENST00000469302 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.92□□□□□ -0.66
TUBGCP3-205ENST00000469302 GLRX3O76003 335 aaKnown RBP10.92□□□□□ -0.66
TUBGCP3-205ENST00000469302 CNGA1P29973 690 aa10.92□□□□□ -0.66
TUBGCP3-205ENST00000469302 PICALMQ13492 652 aa10.92□□□□□ -0.66
TUBGCP3-205ENST00000469302 TRIM60Q495X7 471 aa10.92□□□□□ -0.66
TUBGCP3-205ENST00000469302 SLC39A5Q6ZMH5 540 aa10.92□□□□□ -0.66
TUBGCP3-205ENST00000469302 SLF2Q8IX21 1173 aa10.92□□□□□ -0.66
TUBGCP3-205ENST00000469302 ZGPATQ8N5A5 531 aaKnown RBP10.92□□□□□ -0.66
TUBGCP3-205ENST00000469302 ARRDC4Q8NCT1 418 aa10.92□□□□□ -0.66
TUBGCP3-205ENST00000469302 LPIN2Q92539 896 aa10.92□□□□□ -0.66
TUBGCP3-205ENST00000469302 KAZALD1Q96I82 304 aa10.92□□□□□ -0.66
TUBGCP3-205ENST00000469302 SRCIN1Q9C0H9 1055 aa10.92□□□□□ -0.66
TUBGCP3-205ENST00000469302 PORCNQ9H237 461 aa10.92□□□□□ -0.66
TUBGCP3-205ENST00000469302 GNL3LQ9NVN8 582 aaKnown RBP10.92□□□□□ -0.66
TUBGCP3-205ENST00000469302 FOCADQ5VW36 1801 aa10.91□□□□□ -0.66
TUBGCP3-205ENST00000469302 CACNA1AO00555 2505 aa10.91□□□□□ -0.66
TUBGCP3-205ENST00000469302 FAM196BA6NMK8 535 aa10.91□□□□□ -0.66
TUBGCP3-205ENST00000469302 SEMA3EO15041 775 aa10.91□□□□□ -0.66
TUBGCP3-205ENST00000469302 NPM3O75607 178 aaKnown RBP10.91□□□□□ -0.66
TUBGCP3-205ENST00000469302 CAP2P40123 477 aa10.91□□□□□ -0.66
TUBGCP3-205ENST00000469302 BACE1P56817 501 aa10.91□□□□□ -0.66
TUBGCP3-205ENST00000469302 MTMR2Q13614 643 aa10.91□□□□□ -0.66
TUBGCP3-205ENST00000469302 GJC2Q5T442 439 aaPredicted RBP10.91□□□□□ -0.66
TUBGCP3-205ENST00000469302 C1orf53Q5VUE5 145 aa10.91□□□□□ -0.66
TUBGCP3-205ENST00000469302 DZIP1Q86YF9 867 aaKnown RBP10.91□□□□□ -0.66
TUBGCP3-205ENST00000469302 PPM1EQ8WY54 764 aa10.91□□□□□ -0.66
TUBGCP3-205ENST00000469302 TIFAQ96CG3 184 aa10.91□□□□□ -0.66
TUBGCP3-205ENST00000469302 EDC3Q96F86 508 aaKnown RBP10.91□□□□□ -0.66
TUBGCP3-205ENST00000469302 P2RX7Q99572 595 aaKnown RBP10.91□□□□□ -0.66
TUBGCP3-205ENST00000469302 WDR18Q9BV38 432 aa10.91□□□□□ -0.66
TUBGCP3-205ENST00000469302 BICC1Q9H694 974 aaKnown RBP10.91□□□□□ -0.66
TUBGCP3-205ENST00000469302 TSHZ2Q9NRE2 1034 aa10.91□□□□□ -0.66
TUBGCP3-205ENST00000469302 DENND2AQ9ULE3 1009 aa10.91□□□□□ -0.66
TUBGCP3-205ENST00000469302 XIRP2A4UGR9 3374 aa10.9□□□□□ -0.66
TUBGCP3-205ENST00000469302 TRIM43BA6NCK2 446 aa10.9□□□□□ -0.66
TUBGCP3-205ENST00000469302 PEX10O60683 326 aa10.9□□□□□ -0.66
TUBGCP3-205ENST00000469302 BTDP43251 543 aa10.9□□□□□ -0.66
TUBGCP3-205ENST00000469302 CCNA1P78396 465 aa10.9□□□□□ -0.66
TUBGCP3-205ENST00000469302 POTEEQ6S8J3 1075 aa10.9□□□□□ -0.66
TUBGCP3-205ENST00000469302 SH3RF1Q7Z6J0 888 aa10.9□□□□□ -0.66
TUBGCP3-205ENST00000469302 TRIM43Q96BQ3 446 aaPredicted RBP10.9□□□□□ -0.66
TUBGCP3-205ENST00000469302 PAGR1Q9BTK6 254 aa10.9□□□□□ -0.66
TUBGCP3-205ENST00000469302 FLRT1Q9NZU1 646 aa10.9□□□□□ -0.66
TUBGCP3-205ENST00000469302 RBPJLQ9UBG7 517 aa10.9□□□□□ -0.66
TUBGCP3-205ENST00000469302 PRRC2BQ5JSZ5 2229 aaKnown RBP10.9□□□□□ -0.66
TUBGCP3-205ENST00000469302 MROH7-TTC4A0A0A0MT08 1334 aa10.89□□□□□ -0.67
TUBGCP3-205ENST00000469302 IL16Q14005 1332 aa10.89□□□□□ -0.67
TUBGCP3-205ENST00000469302 SLC15A5A6NIM6 579 aa10.89□□□□□ -0.67
TUBGCP3-205ENST00000469302 C19orf81C9J6K1 198 aa10.89□□□□□ -0.67
TUBGCP3-205ENST00000469302 HOXC6P09630 235 aa10.89□□□□□ -0.67
TUBGCP3-205ENST00000469302 NBPF7P0C2Y1 421 aaPredicted RBP10.89□□□□□ -0.67
TUBGCP3-205ENST00000469302 CYBAP13498 195 aa10.89□□□□□ -0.67
TUBGCP3-205ENST00000469302 ATP2B2Q01814 1243 aa10.89□□□□□ -0.67
TUBGCP3-205ENST00000469302 FPGSQ05932 587 aa10.89□□□□□ -0.67
TUBGCP3-205ENST00000469302 CCDC27Q2M243 656 aa10.89□□□□□ -0.67
TUBGCP3-205ENST00000469302 Q3C1V9 767 aa10.89□□□□□ -0.67
TUBGCP3-205ENST00000469302 ANKRD44Q8N8A2 993 aa10.89□□□□□ -0.67
TUBGCP3-205ENST00000469302 FAM163AQ96GL9 167 aaPredicted RBP10.89□□□□□ -0.67
TUBGCP3-205ENST00000469302 TSPYL2Q9H2G4 693 aaPredicted RBP10.89□□□□□ -0.67
TUBGCP3-205ENST00000469302 HERC5Q9UII4 1024 aaKnown RBP10.89□□□□□ -0.67
TUBGCP3-205ENST00000469302 TACC3Q9Y6A5 838 aa10.89□□□□□ -0.67
TUBGCP3-205ENST00000469302 IVNS1ABPQ9Y6Y0 642 aa10.89□□□□□ -0.67
TUBGCP3-205ENST00000469302 ZNFX1Q9P2E3 1918 aaKnown RBP10.89□□□□□ -0.67
TUBGCP3-205ENST00000469302 FANCIQ9NVI1 1328 aa10.88□□□□□ -0.67
TUBGCP3-205ENST00000469302 LRRC37A2A6NM11 1700 aa10.88□□□□□ -0.67
TUBGCP3-205ENST00000469302 ZBTB22O15209 634 aa10.88□□□□□ -0.67
TUBGCP3-205ENST00000469302 MAP4K4O95819 1239 aaPredicted RBP10.88□□□□□ -0.67
TUBGCP3-205ENST00000469302 ASNSP08243 561 aa10.88□□□□□ -0.67
TUBGCP3-205ENST00000469302 CLTBP09497 229 aa10.88□□□□□ -0.67
TUBGCP3-205ENST00000469302 RAG1P15918 1043 aa10.88□□□□□ -0.67
TUBGCP3-205ENST00000469302 EPHB4P54760 987 aa10.88□□□□□ -0.67
TUBGCP3-205ENST00000469302 HNRNPUQ00839 825 aaKnown RBP eCLIP10.88□□□□□ -0.67
TUBGCP3-205ENST00000469302 SLC4A10Q6U841 1118 aa10.88□□□□□ -0.67
TUBGCP3-205ENST00000469302 KLHDC4Q8TBB5 520 aa10.88□□□□□ -0.67
TUBGCP3-205ENST00000469302 LRFN3Q9BTN0 628 aa10.88□□□□□ -0.67
TUBGCP3-205ENST00000469302 PRDM12Q9H4Q4 367 aa10.88□□□□□ -0.67
TUBGCP3-205ENST00000469302 CXXC1Q9P0U4 656 aaPredicted RBP10.88□□□□□ -0.67
TUBGCP3-205ENST00000469302 RABGAP1Q9Y3P9 1069 aa10.88□□□□□ -0.67
TUBGCP3-205ENST00000469302 PDS5AQ29RF7 1337 aaKnown RBP10.87□□□□□ -0.67
TUBGCP3-205ENST00000469302 USP17L10C9JJH3 530 aa10.87□□□□□ -0.67
TUBGCP3-205ENST00000469302 EYA2O00167 538 aa10.87□□□□□ -0.67
TUBGCP3-205ENST00000469302 KIAA0355O15063 1070 aa10.87□□□□□ -0.67
TUBGCP3-205ENST00000469302 VAMP4O75379 141 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms