RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 CYP2D7A0A087X1C5 515 aa9.66□□□□□ -0.86
NPHP3-204ENST00000469232 H7C1D1 291 aa9.66□□□□□ -0.86
NPHP3-204ENST00000469232 DDNO94850 711 aaPredicted RBP9.66□□□□□ -0.86
NPHP3-204ENST00000469232 CD2BP2O95400 341 aaKnown RBP9.66□□□□□ -0.86
NPHP3-204ENST00000469232 CYP2D6P10635 497 aa9.66□□□□□ -0.86
NPHP3-204ENST00000469232 MCM2P49736 904 aa9.66□□□□□ -0.86
NPHP3-204ENST00000469232 HIRAP54198 1017 aaPredicted RBP9.66□□□□□ -0.86
NPHP3-204ENST00000469232 ANTXR2P58335 489 aa9.66□□□□□ -0.86
NPHP3-204ENST00000469232 HAND2P61296 217 aa9.66□□□□□ -0.86
NPHP3-204ENST00000469232 NBPF9Q3BBW0 867 aa9.66□□□□□ -0.86
NPHP3-204ENST00000469232 TTC6Q86TZ1 520 aa9.66□□□□□ -0.86
NPHP3-204ENST00000469232 ZFPM1Q8IX07 1006 aa9.66□□□□□ -0.86
NPHP3-204ENST00000469232 NCOA7Q8NI08 942 aa9.66□□□□□ -0.86
NPHP3-204ENST00000469232 KRT23Q9C075 422 aa9.66□□□□□ -0.86
NPHP3-204ENST00000469232 ADARB2Q9NS39 739 aaKnown RBP9.66□□□□□ -0.86
NPHP3-204ENST00000469232 CYP46A1Q9Y6A2 500 aa9.66□□□□□ -0.86
NPHP3-204ENST00000469232 GJA3Q9Y6H8 435 aa9.66□□□□□ -0.86
NPHP3-204ENST00000469232 NEDD4P46934 1319 aa9.66□□□□□ -0.86
NPHP3-204ENST00000469232 GREB1LQ9C091 1923 aaPredicted RBP9.66□□□□□ -0.86
NPHP3-204ENST00000469232 PLIN4Q96Q06 1357 aa9.65□□□□□ -0.86
NPHP3-204ENST00000469232 POTECB2RU33 542 aa9.65□□□□□ -0.86
NPHP3-204ENST00000469232 TBC1D12O60347 775 aa9.65□□□□□ -0.86
NPHP3-204ENST00000469232 CASTP20810 708 aaKnown RBP9.65□□□□□ -0.86
NPHP3-204ENST00000469232 NEK4P51957 841 aa9.65□□□□□ -0.86
NPHP3-204ENST00000469232 RBM5P52756 815 aaKnown RBP eCLIP9.65□□□□□ -0.86
NPHP3-204ENST00000469232 CTDSPL2Q05D32 466 aa9.65□□□□□ -0.86
NPHP3-204ENST00000469232 KIF4BQ2VIQ3 1234 aa9.65□□□□□ -0.86
NPHP3-204ENST00000469232 BLOC1S2Q6QNY1 142 aa9.65□□□□□ -0.86
NPHP3-204ENST00000469232 MFSD6Q6ZSS7 791 aa9.65□□□□□ -0.86
NPHP3-204ENST00000469232 FOXP4Q8IVH2 680 aaPredicted RBP9.65□□□□□ -0.86
NPHP3-204ENST00000469232 TRPM4Q8TD43 1214 aa9.65□□□□□ -0.86
NPHP3-204ENST00000469232 TMC2Q8TDI7 906 aa9.65□□□□□ -0.86
NPHP3-204ENST00000469232 ANKS1AQ92625 1134 aa9.65□□□□□ -0.86
NPHP3-204ENST00000469232 TEPSINQ96N21 525 aa9.65□□□□□ -0.86
NPHP3-204ENST00000469232 TCP11L1Q9NUJ3 509 aa9.65□□□□□ -0.86
NPHP3-204ENST00000469232 UTRNP46939 3433 aa9.65□□□□□ -0.87
NPHP3-204ENST00000469232 DDTLA6NHG4 134 aaPredicted RBP9.64□□□□□ -0.87
NPHP3-204ENST00000469232 MYO1BO43795 1136 aa9.64□□□□□ -0.87
NPHP3-204ENST00000469232 GTPBP6O43824 516 aaPredicted RBP9.64□□□□□ -0.87
NPHP3-204ENST00000469232 SLC3A2P08195 630 aaKnown RBP9.64□□□□□ -0.87
NPHP3-204ENST00000469232 HOXB1P14653 301 aaPredicted RBP9.64□□□□□ -0.87
NPHP3-204ENST00000469232 MCM5P33992 734 aa9.64□□□□□ -0.87
NPHP3-204ENST00000469232 EPS15P42566 896 aa9.64□□□□□ -0.87
NPHP3-204ENST00000469232 SAMD7Q7Z3H4 446 aa9.64□□□□□ -0.87
NPHP3-204ENST00000469232 CDAN1Q8IWY9 1227 aa9.64□□□□□ -0.87
NPHP3-204ENST00000469232 IGDCC4Q8TDY8 1250 aa9.64□□□□□ -0.87
NPHP3-204ENST00000469232 ZC3H15Q8WU90 426 aaKnown RBP9.64□□□□□ -0.87
NPHP3-204ENST00000469232 TMEM87BQ96K49 555 aa9.64□□□□□ -0.87
NPHP3-204ENST00000469232 TBC1D2Q9BYX2 928 aa9.64□□□□□ -0.87
NPHP3-204ENST00000469232 UPF3BQ9BZI7 483 aaKnown RBP9.64□□□□□ -0.87
NPHP3-204ENST00000469232 DNAJC18Q9H819 358 aa9.64□□□□□ -0.87
NPHP3-204ENST00000469232 TMOD2Q9NZR1 351 aa9.64□□□□□ -0.87
NPHP3-204ENST00000469232 ZSWIM5Q9P217 1185 aa9.64□□□□□ -0.87
NPHP3-204ENST00000469232 PI4KBQ9UBF8 816 aa9.64□□□□□ -0.87
NPHP3-204ENST00000469232 SWAP70Q9UH65 585 aa9.64□□□□□ -0.87
NPHP3-204ENST00000469232 MINDY4BA8MYZ0 360 aa9.64□□□□□ -0.87
NPHP3-204ENST00000469232 POLR3DP05423 398 aaPredicted RBP9.64□□□□□ -0.87
NPHP3-204ENST00000469232 RASA1P20936 1047 aa9.64□□□□□ -0.87
NPHP3-204ENST00000469232 SHMT1P34896 483 aa9.64□□□□□ -0.87
NPHP3-204ENST00000469232 ANP32AP39687 249 aaKnown RBP9.64□□□□□ -0.87
NPHP3-204ENST00000469232 LIFRP42702 1097 aa9.64□□□□□ -0.87
NPHP3-204ENST00000469232 CDK8P49336 464 aa9.64□□□□□ -0.87
NPHP3-204ENST00000469232 PDE4BQ07343 736 aa9.64□□□□□ -0.87
NPHP3-204ENST00000469232 CUL4AQ13619 759 aa9.64□□□□□ -0.87
NPHP3-204ENST00000469232 TNFAIP1Q13829 316 aa9.64□□□□□ -0.87
NPHP3-204ENST00000469232 TOB2Q14106 344 aaPredicted RBP9.64□□□□□ -0.87
NPHP3-204ENST00000469232 SEC23AQ15436 765 aa9.64□□□□□ -0.87
NPHP3-204ENST00000469232 TATDN1Q6P1N9 297 aa9.64□□□□□ -0.87
NPHP3-204ENST00000469232 USP50Q70EL3 339 aaPredicted RBP9.64□□□□□ -0.87
NPHP3-204ENST00000469232 CYB5R4Q7L1T6 521 aa9.64□□□□□ -0.87
NPHP3-204ENST00000469232 SGMS1Q86VZ5 419 aa9.64□□□□□ -0.87
NPHP3-204ENST00000469232 AMOTL1Q8IY63 956 aa9.64□□□□□ -0.87
NPHP3-204ENST00000469232 INCENPQ9NQS7 918 aa9.64□□□□□ -0.87
NPHP3-204ENST00000469232 SERPINB13Q9UIV8 391 aa9.64□□□□□ -0.87
NPHP3-204ENST00000469232 PPP2R3BQ9Y5P8 575 aa9.64□□□□□ -0.87
NPHP3-204ENST00000469232 NID2Q14112 1375 aa9.63□□□□□ -0.87
NPHP3-204ENST00000469232 IGKV6D-41A0A0C4DH26 115 aa9.63□□□□□ -0.87
NPHP3-204ENST00000469232 B4E1Z4 1266 aa9.63□□□□□ -0.87
NPHP3-204ENST00000469232 CPA1P15085 419 aa9.63□□□□□ -0.87
NPHP3-204ENST00000469232 RCAN1P53805 252 aa9.63□□□□□ -0.87
NPHP3-204ENST00000469232 CACNB3P54284 484 aa9.63□□□□□ -0.87
NPHP3-204ENST00000469232 AK2P54819 239 aa9.63□□□□□ -0.87
NPHP3-204ENST00000469232 TRDNQ13061 729 aa9.63□□□□□ -0.87
NPHP3-204ENST00000469232 ANKRD1Q15327 319 aa9.63□□□□□ -0.87
NPHP3-204ENST00000469232 TBC1D10BQ4KMP7 808 aaPredicted RBP9.63□□□□□ -0.87
NPHP3-204ENST00000469232 APOBEC3FQ8IUX4 373 aaKnown RBP9.63□□□□□ -0.87
NPHP3-204ENST00000469232 ESR2Q92731 530 aa9.63□□□□□ -0.87
NPHP3-204ENST00000469232 DYNLL2Q96FJ2 89 aa9.63□□□□□ -0.87
NPHP3-204ENST00000469232 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.63□□□□□ -0.87
NPHP3-204ENST00000469232 ZNF287Q9HBT7 754 aa9.63□□□□□ -0.87
NPHP3-204ENST00000469232 PDRG1Q9NUG6 133 aa9.63□□□□□ -0.87
NPHP3-204ENST00000469232 SAP30BPQ9UHR5 308 aaKnown RBP9.63□□□□□ -0.87
NPHP3-204ENST00000469232 HERC5Q9UII4 1024 aaKnown RBP9.63□□□□□ -0.87
NPHP3-204ENST00000469232 HACL1Q9UJ83 578 aa9.63□□□□□ -0.87
NPHP3-204ENST00000469232 CLRN2A0PK11 232 aa9.62□□□□□ -0.87
NPHP3-204ENST00000469232 IQCA1LA6NCM1 817 aa9.62□□□□□ -0.87
NPHP3-204ENST00000469232 SH2B2O14492 632 aaPredicted RBP9.62□□□□□ -0.87
NPHP3-204ENST00000469232 PRC1O43663 620 aa9.62□□□□□ -0.87
NPHP3-204ENST00000469232 HLA-DOAP06340 250 aa9.62□□□□□ -0.87
NPHP3-204ENST00000469232 TNNI2P48788 182 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms