RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 RANBP6O60518 1105 aaKnown RBP8.1□□□□□ -1.11
SCAF4-204ENST00000467731 HSP90AA1P07900 732 aaKnown RBP8.1□□□□□ -1.11
SCAF4-204ENST00000467731 RASA1P20936 1047 aa8.1□□□□□ -1.11
SCAF4-204ENST00000467731 SHMT1P34896 483 aa8.1□□□□□ -1.11
SCAF4-204ENST00000467731 NEK4P51957 841 aa8.1□□□□□ -1.11
SCAF4-204ENST00000467731 RABEP1Q15276 862 aa8.1□□□□□ -1.11
SCAF4-204ENST00000467731 METTL16Q86W50 562 aaKnown RBP8.1□□□□□ -1.11
SCAF4-204ENST00000467731 FOXP4Q8IVH2 680 aaPredicted RBP8.1□□□□□ -1.11
SCAF4-204ENST00000467731 ZFP91Q96JP5 570 aaPredicted RBP8.1□□□□□ -1.11
SCAF4-204ENST00000467731 TRIM34Q9BYJ4 488 aa8.1□□□□□ -1.11
SCAF4-204ENST00000467731 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.1□□□□□ -1.115e-10■■■■■ 27
SCAF4-204ENST00000467731 ZNF287Q9HBT7 754 aa8.1□□□□□ -1.11
SCAF4-204ENST00000467731 SWAP70Q9UH65 585 aa8.1□□□□□ -1.11
SCAF4-204ENST00000467731 HERC5Q9UII4 1024 aaKnown RBP8.1□□□□□ -1.11
SCAF4-204ENST00000467731 PPP2R3BQ9Y5P8 575 aa8.1□□□□□ -1.11
SCAF4-204ENST00000467731 CYP46A1Q9Y6A2 500 aa8.1□□□□□ -1.11
SCAF4-204ENST00000467731 ATAD5Q96QE3 1844 aa8.09□□□□□ -1.11
SCAF4-204ENST00000467731 PCNTO95613 3336 aa8.09□□□□□ -1.11
SCAF4-204ENST00000467731 HMGB1P09429 215 aaKnown RBP8.09□□□□□ -1.11
SCAF4-204ENST00000467731 RPS6KB1P23443 525 aa8.09□□□□□ -1.11
SCAF4-204ENST00000467731 FAM47AQ5JRC9 791 aa8.09□□□□□ -1.11
SCAF4-204ENST00000467731 MAP1SQ66K74 1059 aaPredicted RBP8.09□□□□□ -1.11
SCAF4-204ENST00000467731 CYB5R4Q7L1T6 521 aa8.09□□□□□ -1.11
SCAF4-204ENST00000467731 TEX2Q8IWB9 1127 aa8.09□□□□□ -1.11
SCAF4-204ENST00000467731 ESR2Q92731 530 aa8.09□□□□□ -1.11
SCAF4-204ENST00000467731 LRRC2Q9BYS8 371 aa8.09□□□□□ -1.11
SCAF4-204ENST00000467731 GLIS2Q9BZE0 524 aaPredicted RBP8.09□□□□□ -1.11
SCAF4-204ENST00000467731 ZSWIM5Q9P217 1185 aa8.09□□□□□ -1.11
SCAF4-204ENST00000467731 TAOK2Q9UL54 1235 aa8.09□□□□□ -1.11
SCAF4-204ENST00000467731 SSC5DA1L4H1 1573 aa8.09□□□□□ -1.11
SCAF4-204ENST00000467731 TSPY2A6NKD2 308 aa8.09□□□□□ -1.11
SCAF4-204ENST00000467731 MCM5P33992 734 aa8.09□□□□□ -1.11
SCAF4-204ENST00000467731 ANTXR2P58335 489 aa8.09□□□□□ -1.11
SCAF4-204ENST00000467731 DHX32Q7L7V1 743 aaKnown RBP8.09□□□□□ -1.11
SCAF4-204ENST00000467731 ZNF444Q8N0Y2 327 aaPredicted RBP8.09□□□□□ -1.11
SCAF4-204ENST00000467731 GREB1LQ9C091 1923 aaPredicted RBP8.09□□□□□ -1.11
SCAF4-204ENST00000467731 GPBP1L1Q9HC44 474 aaPredicted RBP8.09□□□□□ -1.11
SCAF4-204ENST00000467731 TBC1D12O60347 775 aa8.08□□□□□ -1.12
SCAF4-204ENST00000467731 CD2BP2O95400 341 aaKnown RBP8.08□□□□□ -1.12
SCAF4-204ENST00000467731 TSPY3P0CV98 308 aa8.08□□□□□ -1.12
SCAF4-204ENST00000467731 TSPY8P0CW00 308 aa8.08□□□□□ -1.12
SCAF4-204ENST00000467731 CDK11BP21127 795 aaKnown RBP8.08□□□□□ -1.12
SCAF4-204ENST00000467731 EXOSC10Q01780 885 aaKnown RBP8.08□□□□□ -1.12
SCAF4-204ENST00000467731 TATDN1Q6P1N9 297 aa8.08□□□□□ -1.12
SCAF4-204ENST00000467731 CDC37L1Q7L3B6 337 aa8.08□□□□□ -1.12
SCAF4-204ENST00000467731 USP48Q86UV5 1035 aa8.08□□□□□ -1.12
SCAF4-204ENST00000467731 LDHDQ86WU2 507 aa8.08□□□□□ -1.12
SCAF4-204ENST00000467731 ZKSCAN3Q9BRR0 538 aa8.08□□□□□ -1.12
SCAF4-204ENST00000467731 FZD1Q9UP38 647 aa8.08□□□□□ -1.12
SCAF4-204ENST00000467731 MYH4Q9Y623 1939 aa8.08□□□□□ -1.12
SCAF4-204ENST00000467731 PRC1O43663 620 aa8.08□□□□□ -1.12
SCAF4-204ENST00000467731 CHRM1P11229 460 aaPredicted RBP8.08□□□□□ -1.12
SCAF4-204ENST00000467731 TFAP4Q01664 338 aa8.08□□□□□ -1.12
SCAF4-204ENST00000467731 MAP3K10Q02779 954 aa8.08□□□□□ -1.12
SCAF4-204ENST00000467731 SHROOM1Q2M3G4 852 aaPredicted RBP8.08□□□□□ -1.12
SCAF4-204ENST00000467731 TTC14Q96N46 770 aa8.08□□□□□ -1.12
SCAF4-204ENST00000467731 NMT2O60551 498 aa8.07□□□□□ -1.12
SCAF4-204ENST00000467731 GDF11O95390 407 aa8.07□□□□□ -1.12
SCAF4-204ENST00000467731 AKR1B1P15121 316 aa8.07□□□□□ -1.12
SCAF4-204ENST00000467731 RRP1BQ14684 758 aaKnown RBP8.07□□□□□ -1.12
SCAF4-204ENST00000467731 CERKLQ49MI3 558 aaPredicted RBP8.07□□□□□ -1.12
SCAF4-204ENST00000467731 PDRG1Q9NUG6 133 aa8.07□□□□□ -1.12
SCAF4-204ENST00000467731 OTOFQ9HC10 1997 aa8.07□□□□□ -1.12
SCAF4-204ENST00000467731 MPHOSPH10O00566 681 aaKnown RBP8.07□□□□□ -1.12
SCAF4-204ENST00000467731 ST18O60284 1047 aa8.07□□□□□ -1.12
SCAF4-204ENST00000467731 AK2P54819 239 aa8.07□□□□□ -1.12
SCAF4-204ENST00000467731 SUPT20HL1Q3ZLR7 823 aa8.07□□□□□ -1.12
SCAF4-204ENST00000467731 Q6ZUG5 572 aa8.07□□□□□ -1.12
SCAF4-204ENST00000467731 IQCA1Q86XH1 822 aa8.07□□□□□ -1.12
SCAF4-204ENST00000467731 CDCA5Q96FF9 252 aa8.07□□□□□ -1.12
SCAF4-204ENST00000467731 GPHNQ9NQX3 736 aaPredicted RBP8.07□□□□□ -1.12
SCAF4-204ENST00000467731 TNKSO95271 1327 aa8.07□□□□□ -1.12
SCAF4-204ENST00000467731 TRAF5O00463 557 aa8.07□□□□□ -1.12
SCAF4-204ENST00000467731 IFIT3O14879 490 aaKnown RBP8.07□□□□□ -1.12
SCAF4-204ENST00000467731 FMR1Q06787 632 aaKnown RBP eCLIP8.07□□□□□ -1.12
SCAF4-204ENST00000467731 PRKG1Q13976 671 aa8.07□□□□□ -1.12
SCAF4-204ENST00000467731 TOB2Q14106 344 aaPredicted RBP8.07□□□□□ -1.12
SCAF4-204ENST00000467731 DCAF15Q66K64 600 aa8.07□□□□□ -1.12
SCAF4-204ENST00000467731 NOL8Q76FK4 1167 aaKnown RBP8.07□□□□□ -1.12
SCAF4-204ENST00000467731 IGDCC4Q8TDY8 1250 aa8.07□□□□□ -1.12
SCAF4-204ENST00000467731 HOOK2Q96ED9 719 aa8.07□□□□□ -1.12
SCAF4-204ENST00000467731 LARP6Q9BRS8 491 aaKnown RBP8.07□□□□□ -1.12
SCAF4-204ENST00000467731 UBAC1Q9BSL1 405 aa8.07□□□□□ -1.12
SCAF4-204ENST00000467731 IL17RBQ9NRM6 502 aa8.07□□□□□ -1.12
SCAF4-204ENST00000467731 DOCK1Q14185 1865 aa8.06□□□□□ -1.12
SCAF4-204ENST00000467731 PLIN4Q96Q06 1357 aa8.06□□□□□ -1.12
SCAF4-204ENST00000467731 WDR19Q8NEZ3 1342 aa8.06□□□□□ -1.12
SCAF4-204ENST00000467731 PHF20L1A8MW92 1017 aa8.06□□□□□ -1.12
SCAF4-204ENST00000467731 NT5C2P49902 561 aa8.06□□□□□ -1.12
SCAF4-204ENST00000467731 SART3Q15020 963 aaKnown RBP8.06□□□□□ -1.12
SCAF4-204ENST00000467731 CLEC10AQ8IUN9 316 aa8.06□□□□□ -1.12
SCAF4-204ENST00000467731 ENAHQ8N8S7 591 aaPredicted RBP8.06□□□□□ -1.12
SCAF4-204ENST00000467731 NEDD1Q8NHV4 660 aa8.06□□□□□ -1.12
SCAF4-204ENST00000467731 BRF1Q92994 677 aa8.06□□□□□ -1.12
SCAF4-204ENST00000467731 TMEM87BQ96K49 555 aa8.06□□□□□ -1.12
SCAF4-204ENST00000467731 CCDC17Q96LX7 622 aa8.06□□□□□ -1.12
SCAF4-204ENST00000467731 ZSCAN10Q96SZ4 725 aaPredicted RBP8.06□□□□□ -1.12
SCAF4-204ENST00000467731 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.06□□□□□ -1.12
SCAF4-204ENST00000467731 AGXT2Q9BYV1 514 aa8.06□□□□□ -1.12
SCAF4-204ENST00000467731 PAPPA2Q9BXP8 1791 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms