RNA–Protein interactions for RNA: ENST00000466032.1

CHMP3-206, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 436 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-206ENST00000466032 PRDX5P30044 214 aa7.14□□□□□ -1.27
CHMP3-206ENST00000466032 VEGFBP49765 207 aa7.14□□□□□ -1.27
CHMP3-206ENST00000466032 TRDNQ13061 729 aa7.14□□□□□ -1.27
CHMP3-206ENST00000466032 NECTIN1Q15223 517 aa7.14□□□□□ -1.27
CHMP3-206ENST00000466032 ANKRD1Q15327 319 aa7.14□□□□□ -1.27
CHMP3-206ENST00000466032 FER1L6Q2WGJ9 1857 aa7.14□□□□□ -1.27
CHMP3-206ENST00000466032 DACT2Q5SW24 774 aa7.14□□□□□ -1.27
CHMP3-206ENST00000466032 CIAPIN1Q6FI81 312 aa7.14□□□□□ -1.27
CHMP3-206ENST00000466032 MAST2Q6P0Q8 1798 aa7.14□□□□□ -1.27
CHMP3-206ENST00000466032 RSBN1LQ6PCB5 846 aaPredicted RBP7.14□□□□□ -1.27
CHMP3-206ENST00000466032 MTMR14Q8NCE2 650 aa7.14□□□□□ -1.27
CHMP3-206ENST00000466032 MTA3Q9BTC8 594 aa7.14□□□□□ -1.27
CHMP3-206ENST00000466032 PUS7LQ9H0K6 701 aaKnown RBP7.14□□□□□ -1.27
CHMP3-206ENST00000466032 NAPBQ9H115 298 aa7.14□□□□□ -1.27
CHMP3-206ENST00000466032 CNNM2Q9H8M5 875 aa7.14□□□□□ -1.27
CHMP3-206ENST00000466032 DBNDD1Q9H9R9 158 aa7.14□□□□□ -1.27
CHMP3-206ENST00000466032 ARPP21Q9UBL0 812 aaPredicted RBP7.14□□□□□ -1.27
CHMP3-206ENST00000466032 WWC3Q9ULE0 1092 aa7.14□□□□□ -1.27
CHMP3-206ENST00000466032 NDUFB9Q9Y6M9 179 aa7.14□□□□□ -1.27
CHMP3-206ENST00000466032 CACNA1SQ13698 1873 aa7.13□□□□□ -1.27
CHMP3-206ENST00000466032 WTIPA6NIX2 430 aaPredicted RBP7.13□□□□□ -1.27
CHMP3-206ENST00000466032 FZD9O00144 591 aa7.13□□□□□ -1.27
CHMP3-206ENST00000466032 NFKBIEO00221 500 aa7.13□□□□□ -1.27
CHMP3-206ENST00000466032 MYO1BO43795 1136 aa7.13□□□□□ -1.27
CHMP3-206ENST00000466032 MBD4O95243 580 aa7.13□□□□□ -1.27
CHMP3-206ENST00000466032 APPP05067 770 aa7.13□□□□□ -1.27
CHMP3-206ENST00000466032 VSIG8P0DPA2 414 aa7.13□□□□□ -1.27
CHMP3-206ENST00000466032 SBK1Q52WX2 424 aa7.13□□□□□ -1.27
CHMP3-206ENST00000466032 CCDC178Q5BJE1 867 aa7.13□□□□□ -1.27
CHMP3-206ENST00000466032 FKBP1CQ5VVH2 108 aa7.13□□□□□ -1.27
CHMP3-206ENST00000466032 ARHGAP27Q6ZUM4 889 aa7.13□□□□□ -1.27
CHMP3-206ENST00000466032 SNX21Q969T3 373 aa7.13□□□□□ -1.27
CHMP3-206ENST00000466032 ZDHHC15Q96MV8 337 aa7.13□□□□□ -1.27
CHMP3-206ENST00000466032 RIOK1Q9BRS2 568 aaKnown RBP7.13□□□□□ -1.27
CHMP3-206ENST00000466032 ALDH8A1Q9H2A2 487 aaPredicted RBP7.13□□□□□ -1.27
CHMP3-206ENST00000466032 ZNF277Q9NRM2 450 aaPredicted RBP7.13□□□□□ -1.27
CHMP3-206ENST00000466032 TMOD2Q9NZR1 351 aa7.13□□□□□ -1.27
CHMP3-206ENST00000466032 TTF2Q9UNY4 1162 aaKnown RBP7.13□□□□□ -1.27
CHMP3-206ENST00000466032 RBM8AQ9Y5S9 174 aaKnown RBP7.13□□□□□ -1.27
CHMP3-206ENST00000466032 SLC4A4Q9Y6R1 1079 aa7.13□□□□□ -1.27
CHMP3-206ENST00000466032 COL1A1P02452 1464 aaPredicted RBP7.12□□□□□ -1.27
CHMP3-206ENST00000466032 WDR19Q8NEZ3 1342 aa7.12□□□□□ -1.27
CHMP3-206ENST00000466032 CHD4Q14839 1912 aa7.12□□□□□ -1.27
CHMP3-206ENST00000466032 M0R2C6 588 aa7.12□□□□□ -1.27
CHMP3-206ENST00000466032 S1PR4O95977 384 aa7.12□□□□□ -1.27
CHMP3-206ENST00000466032 FGAP02671 866 aa7.12□□□□□ -1.27
CHMP3-206ENST00000466032 USP17L8P0C7I0 530 aa7.12□□□□□ -1.27
CHMP3-206ENST00000466032 PDIA4P13667 645 aaKnown RBP7.12□□□□□ -1.27
CHMP3-206ENST00000466032 USP5P45974 858 aa7.12□□□□□ -1.27
CHMP3-206ENST00000466032 TDO2P48775 406 aa7.12□□□□□ -1.27
CHMP3-206ENST00000466032 PDE4BQ07343 736 aa7.12□□□□□ -1.27
CHMP3-206ENST00000466032 CREB3L3Q68CJ9 461 aa7.12□□□□□ -1.27
CHMP3-206ENST00000466032 OLFM4Q6UX06 510 aa7.12□□□□□ -1.27
CHMP3-206ENST00000466032 TTC6Q86TZ1 520 aa7.12□□□□□ -1.27
CHMP3-206ENST00000466032 ZNF589Q86UQ0 364 aaPredicted RBP7.12□□□□□ -1.27
CHMP3-206ENST00000466032 IFNL3Q8IZI9 196 aa7.12□□□□□ -1.27
CHMP3-206ENST00000466032 TMTC2Q8N394 836 aa7.12□□□□□ -1.27
CHMP3-206ENST00000466032 FBXL16Q8N461 479 aa7.12□□□□□ -1.27
CHMP3-206ENST00000466032 NLGN2Q8NFZ4 835 aa7.12□□□□□ -1.27
CHMP3-206ENST00000466032 KRT23Q9C075 422 aa7.12□□□□□ -1.27
CHMP3-206ENST00000466032 DHX36Q9H2U1 1008 aaKnown RBP7.12□□□□□ -1.27
CHMP3-206ENST00000466032 ANAPC4Q9UJX5 808 aa7.12□□□□□ -1.27
CHMP3-206ENST00000466032 CYP46A1Q9Y6A2 500 aa7.12□□□□□ -1.27
CHMP3-206ENST00000466032 PSME4Q14997 1843 aa7.11□□□□□ -1.27
CHMP3-206ENST00000466032 GSG1L2A8MUP6 293 aa7.11□□□□□ -1.27
CHMP3-206ENST00000466032 H7C1D1 291 aa7.11□□□□□ -1.27
CHMP3-206ENST00000466032 PSMD14O00487 310 aa7.11□□□□□ -1.27
CHMP3-206ENST00000466032 SLC27A2O14975 620 aa7.11□□□□□ -1.27
CHMP3-206ENST00000466032 BTDP43251 543 aa7.11□□□□□ -1.27
CHMP3-206ENST00000466032 CRKP46108 304 aa7.11□□□□□ -1.27
CHMP3-206ENST00000466032 PTH1RQ03431 593 aa7.11□□□□□ -1.27
CHMP3-206ENST00000466032 CXCL9Q07325 125 aa7.11□□□□□ -1.27
CHMP3-206ENST00000466032 TNFAIP1Q13829 316 aa7.11□□□□□ -1.27
CHMP3-206ENST00000466032 SART3Q15020 963 aaKnown RBP7.11□□□□□ -1.27
CHMP3-206ENST00000466032 DLGAP5Q15398 846 aa7.11□□□□□ -1.27
CHMP3-206ENST00000466032 GPR162Q16538 588 aa7.11□□□□□ -1.27
CHMP3-206ENST00000466032 VPS53Q5VIR6 699 aa7.11□□□□□ -1.27
CHMP3-206ENST00000466032 BLOC1S2Q6QNY1 142 aa7.11□□□□□ -1.27
CHMP3-206ENST00000466032 RALYLQ86SE5 291 aaKnown RBP7.11□□□□□ -1.27
CHMP3-206ENST00000466032 HSCBQ8IWL3 235 aa7.11□□□□□ -1.27
CHMP3-206ENST00000466032 GPC2Q8N158 579 aa7.11□□□□□ -1.27
CHMP3-206ENST00000466032 NCOA7Q8NI08 942 aa7.11□□□□□ -1.27
CHMP3-206ENST00000466032 HOOK2Q96ED9 719 aa7.11□□□□□ -1.27
CHMP3-206ENST00000466032 ZSCAN31Q96LW9 406 aaPredicted RBP7.11□□□□□ -1.27
CHMP3-206ENST00000466032 GPR101Q96P66 508 aaPredicted RBP7.11□□□□□ -1.27
CHMP3-206ENST00000466032 NEK1Q96PY6 1258 aa7.11□□□□□ -1.27
CHMP3-206ENST00000466032 SEC62Q99442 399 aaKnown RBP7.11□□□□□ -1.27
CHMP3-206ENST00000466032 GMLQ99445 158 aa7.11□□□□□ -1.27
CHMP3-206ENST00000466032 IDI2Q9BXS1 227 aa7.11□□□□□ -1.27
CHMP3-206ENST00000466032 KRTAP4-2Q9BYR5 136 aa7.11□□□□□ -1.27
CHMP3-206ENST00000466032 ARMT1Q9H993 441 aa7.11□□□□□ -1.27
CHMP3-206ENST00000466032 AATFQ9NY61 560 aaKnown RBP eCLIP7.11□□□□□ -1.27
CHMP3-206ENST00000466032 YDJCA8MPS7 323 aa7.1□□□□□ -1.27
CHMP3-206ENST00000466032 ENTPD3O75355 529 aa7.1□□□□□ -1.27
CHMP3-206ENST00000466032 HLA-DOAP06340 250 aa7.1□□□□□ -1.27
CHMP3-206ENST00000466032 CYP21A2P08686 494 aa7.1□□□□□ -1.27
CHMP3-206ENST00000466032 MCM5P33992 734 aa7.1□□□□□ -1.27
CHMP3-206ENST00000466032 TNNI2P48788 182 aa7.1□□□□□ -1.27
CHMP3-206ENST00000466032 RBM5P52756 815 aaKnown RBP eCLIP7.1□□□□□ -1.27
CHMP3-206ENST00000466032 AKNAD1Q5T1N1 836 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms