RNA–Protein interactions for RNA: ENST00000465315.1

CCDC115-204, Transcript of coiled-coil domain containing 115, humanhuman

TSL 2

Gene CCDC115, Length 3,562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115-204ENST00000465315 KRT2P35908 639 aa13.01□□□□□ -0.33
CCDC115-204ENST00000465315 DDB1Q16531 1140 aa13.01□□□□□ -0.33
CCDC115-204ENST00000465315 KIF4BQ2VIQ3 1234 aa13.01□□□□□ -0.33
CCDC115-204ENST00000465315 VPS16Q9H269 839 aa13.01□□□□□ -0.33
CCDC115-204ENST00000465315 FMR1Q06787 632 aaKnown RBP eCLIP13.01□□□□□ -0.33
CCDC115-204ENST00000465315 CRACR2BQ8N4Y2 399 aaPredicted RBP13.01□□□□□ -0.33
CCDC115-204ENST00000465315 BBXQ8WY36 941 aaPredicted RBP13.01□□□□□ -0.33
CCDC115-204ENST00000465315 NUP88Q99567 741 aaPredicted RBP13.01□□□□□ -0.33
CCDC115-204ENST00000465315 PPP2R2CQ9Y2T4 447 aa13.01□□□□□ -0.33
CCDC115-204ENST00000465315 PLEKHA8P1O95397 391 aa13.01□□□□□ -0.33
CCDC115-204ENST00000465315 GNAT2P19087 354 aa13.01□□□□□ -0.33
CCDC115-204ENST00000465315 PTPAQ15257 358 aa13.01□□□□□ -0.33
CCDC115-204ENST00000465315 SLC4A9Q96Q91 983 aa13.01□□□□□ -0.33
CCDC115-204ENST00000465315 CCDC87Q9NVE4 849 aa13.01□□□□□ -0.33
CCDC115-204ENST00000465315 STRCQ7RTU9 1775 aa13.01□□□□□ -0.33
CCDC115-204ENST00000465315 MARF1Q9Y4F3 1742 aaKnown RBP13□□□□□ -0.33
CCDC115-204ENST00000465315 SEC31AO94979 1220 aaKnown RBP13□□□□□ -0.33
CCDC115-204ENST00000465315 CRKLP46109 303 aaKnown RBP13□□□□□ -0.33
CCDC115-204ENST00000465315 BMS1Q14692 1282 aaKnown RBP13□□□□□ -0.33
CCDC115-204ENST00000465315 TSR1Q2NL82 804 aaKnown RBP13□□□□□ -0.33
CCDC115-204ENST00000465315 SPECC1LQ69YQ0 1117 aa13□□□□□ -0.33
CCDC115-204ENST00000465315 GPIHBP1Q8IV16 184 aa13□□□□□ -0.33
CCDC115-204ENST00000465315 IGSF22Q8N9C0 903 aa13□□□□□ -0.33
CCDC115-204ENST00000465315 LIFRP42702 1097 aa13□□□□□ -0.33
CCDC115-204ENST00000465315 VSTM4Q8IW00 320 aa13□□□□□ -0.33
CCDC115-204ENST00000465315 TIGD1Q96MW7 591 aa13□□□□□ -0.33
CCDC115-204ENST00000465315 GTPBP4Q9BZE4 634 aaKnown RBP13□□□□□ -0.33
CCDC115-204ENST00000465315 CTNND2Q9UQB3 1225 aa13□□□□□ -0.33
CCDC115-204ENST00000465315 PSDA5PKW4 1024 aaPredicted RBP13□□□□□ -0.33
CCDC115-204ENST00000465315 NMT2O60551 498 aa13□□□□□ -0.33
CCDC115-204ENST00000465315 CERKQ8TCT0 537 aa13□□□□□ -0.33
CCDC115-204ENST00000465315 SYMPKQ92797 1274 aaKnown RBP13□□□□□ -0.33
CCDC115-204ENST00000465315 FAM217BQ9NTX9 383 aaPredicted RBP13□□□□□ -0.33
CCDC115-204ENST00000465315 STX8Q9UNK0 236 aa13□□□□□ -0.33
CCDC115-204ENST00000465315 STRCP1A6NGW2 1772 aa12.99□□□□□ -0.33
CCDC115-204ENST00000465315 ARHGAP6O43182 974 aa12.99□□□□□ -0.33
CCDC115-204ENST00000465315 NKX1-1Q15270 411 aaPredicted RBP12.99□□□□□ -0.33
CCDC115-204ENST00000465315 NTRK3Q16288 839 aa12.99□□□□□ -0.33
CCDC115-204ENST00000465315 MLKLQ8NB16 471 aa12.99□□□□□ -0.33
CCDC115-204ENST00000465315 PLA2G12BQ9BX93 195 aa12.99□□□□□ -0.33
CCDC115-204ENST00000465315 IRX2Q9BZI1 471 aaPredicted RBP12.99□□□□□ -0.33
CCDC115-204ENST00000465315 VAT1LQ9HCJ6 419 aa12.99□□□□□ -0.33
CCDC115-204ENST00000465315 AFDNP55196 1824 aaKnown RBP12.99□□□□□ -0.33
CCDC115-204ENST00000465315 USP5P45974 858 aa12.99□□□□□ -0.33
CCDC115-204ENST00000465315 MTF1Q14872 753 aa12.99□□□□□ -0.33
CCDC115-204ENST00000465315 KANK3Q6NY19 840 aa12.99□□□□□ -0.33
CCDC115-204ENST00000465315 TOGARAM2Q6ZUX3 1019 aa12.99□□□□□ -0.33
CCDC115-204ENST00000465315 DZIP1Q86YF9 867 aaKnown RBP12.99□□□□□ -0.33
CCDC115-204ENST00000465315 MKNK2Q9HBH9 465 aa12.99□□□□□ -0.33
CCDC115-204ENST00000465315 IL6STP40189 918 aaPredicted RBP12.99□□□□□ -0.33
CCDC115-204ENST00000465315 TXLNAP40222 546 aa12.99□□□□□ -0.33
CCDC115-204ENST00000465315 NOL10Q9BSC4 688 aaKnown RBP12.99□□□□□ -0.33
CCDC115-204ENST00000465315 MCM9Q9NXL9 1143 aa12.99□□□□□ -0.33
CCDC115-204ENST00000465315 DDX41Q9UJV9 622 aaKnown RBP12.99□□□□□ -0.33
CCDC115-204ENST00000465315 C5P01031 1676 aa12.98□□□□□ -0.33
CCDC115-204ENST00000465315 AKR1B15C9JRZ8 316 aaPredicted RBP12.98□□□□□ -0.33
CCDC115-204ENST00000465315 KIF5CO60282 957 aa12.98□□□□□ -0.33
CCDC115-204ENST00000465315 ARID4AP29374 1257 aaPredicted RBP12.98□□□□□ -0.33
CCDC115-204ENST00000465315 TOB1P50616 345 aaPredicted RBP12.98□□□□□ -0.33
CCDC115-204ENST00000465315 ZNF569Q5MCW4 686 aa12.98□□□□□ -0.33
CCDC115-204ENST00000465315 SGMS1Q86VZ5 419 aa12.98□□□□□ -0.33
CCDC115-204ENST00000465315 MAP3K14Q99558 947 aa12.98□□□□□ -0.33
CCDC115-204ENST00000465315 ZNF652Q9Y2D9 606 aa12.98□□□□□ -0.33
CCDC115-204ENST00000465315 CDHR2Q9BYE9 1310 aa12.98□□□□□ -0.33
CCDC115-204ENST00000465315 SYNRGQ9UMZ2 1314 aa12.98□□□□□ -0.33
CCDC115-204ENST00000465315 SOWAHDA6NJG2 315 aa12.98□□□□□ -0.33
CCDC115-204ENST00000465315 TEX33O43247 280 aa12.98□□□□□ -0.33
CCDC115-204ENST00000465315 PTPREP23469 700 aa12.98□□□□□ -0.33
CCDC115-204ENST00000465315 PTGDRQ13258 359 aa12.98□□□□□ -0.33
CCDC115-204ENST00000465315 TTC38Q5R3I4 469 aa12.98□□□□□ -0.33
CCDC115-204ENST00000465315 RASGRP4Q8TDF6 673 aa12.98□□□□□ -0.33
CCDC115-204ENST00000465315 ZSCAN10Q96SZ4 725 aaPredicted RBP12.98□□□□□ -0.33
CCDC115-204ENST00000465315 BPIFA3Q9BQP9 254 aa12.98□□□□□ -0.33
CCDC115-204ENST00000465315 PPP2R3AQ06190 1150 aa12.97□□□□□ -0.33
CCDC115-204ENST00000465315 FAM98CQ17RN3 349 aaKnown RBP12.97□□□□□ -0.33
CCDC115-204ENST00000465315 NOM1Q5C9Z4 860 aaKnown RBP12.97□□□□□ -0.33
CCDC115-204ENST00000465315 TAB2Q9NYJ8 693 aa12.97□□□□□ -0.33
CCDC115-204ENST00000465315 TUBE1Q9UJT0 475 aa12.97□□□□□ -0.33
CCDC115-204ENST00000465315 CCDC175P0C221 793 aa12.97□□□□□ -0.33
CCDC115-204ENST00000465315 CLCN6P51797 869 aa12.97□□□□□ -0.33
CCDC115-204ENST00000465315 FAM182BQ5T319 152 aa12.97□□□□□ -0.33
CCDC115-204ENST00000465315 GPKOWQ92917 476 aaPredicted RBP eCLIP12.97□□□□□ -0.33
CCDC115-204ENST00000465315 LOC102724428A0A0B4J2F2 783 aa12.97□□□□□ -0.33
CCDC115-204ENST00000465315 SIK1P57059 783 aa12.97□□□□□ -0.33
CCDC115-204ENST00000465315 MCM6Q14566 821 aa12.97□□□□□ -0.33
CCDC115-204ENST00000465315 FOXP1Q9H334 677 aaPredicted RBP12.97□□□□□ -0.33
CCDC115-204ENST00000465315 ANKIB1Q9P2G1 1089 aa12.97□□□□□ -0.33
CCDC115-204ENST00000465315 FBXO2Q9UK22 296 aaPredicted RBP12.97□□□□□ -0.33
CCDC115-204ENST00000465315 CCDC194A0A1B0GVG4 234 aa12.96□□□□□ -0.33
CCDC115-204ENST00000465315 TCRBV5S4A2TA0A5A2 114 aa12.96□□□□□ -0.33
CCDC115-204ENST00000465315 WDR24Q96S15 920 aa12.96□□□□□ -0.33
CCDC115-204ENST00000465315 KAT14Q9H8E8 782 aa12.96□□□□□ -0.33
CCDC115-204ENST00000465315 HPSEQ9Y251 543 aa12.96□□□□□ -0.33
CCDC115-204ENST00000465315 CAMTA1Q9Y6Y1 1673 aa12.96□□□□□ -0.33
CCDC115-204ENST00000465315 ZBTB22O15209 634 aa12.96□□□□□ -0.33
CCDC115-204ENST00000465315 RHOXF2BP0C7M4 288 aa12.96□□□□□ -0.33
CCDC115-204ENST00000465315 CYP2D6P10635 497 aa12.96□□□□□ -0.33
CCDC115-204ENST00000465315 ERCC3P19447 782 aa12.96□□□□□ -0.33
CCDC115-204ENST00000465315 BMP6P22004 513 aa12.96□□□□□ -0.33
CCDC115-204ENST00000465315 ERFEQ4G0M1 354 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms