RNA–Protein interactions for RNA: ENST00000465180.5

HDGF-204, Transcript of heparin binding growth factor, humanhuman

TSL 1 (best)

Gene HDGF, Length 2,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGF-204ENST00000465180 PSME4Q14997 1843 aa18.31■□□□□ 0.52
HDGF-204ENST00000465180 WDHD1O75717 1129 aaPredicted RBP18.3■□□□□ 0.52
HDGF-204ENST00000465180 POLR3DP05423 398 aaPredicted RBP18.3■□□□□ 0.52
HDGF-204ENST00000465180 MMP14P50281 582 aa18.3■□□□□ 0.52
HDGF-204ENST00000465180 EXOSC10Q01780 885 aaKnown RBP18.3■□□□□ 0.52
HDGF-204ENST00000465180 GPR162Q16538 588 aa18.3■□□□□ 0.52
HDGF-204ENST00000465180 RRP12Q5JTH9 1297 aaKnown RBP18.3■□□□□ 0.52
HDGF-204ENST00000465180 AMOTL1Q8IY63 956 aa18.3■□□□□ 0.52
HDGF-204ENST00000465180 ADAMTSL1Q8N6G6 1762 aa18.3■□□□□ 0.52
HDGF-204ENST00000465180 BAZ2AQ9UIF9 1905 aaKnown RBP18.3■□□□□ 0.52
HDGF-204ENST00000465180 B4E1Z4 1266 aa18.3■□□□□ 0.52
HDGF-204ENST00000465180 RIOK3O14730 519 aaKnown RBP18.3■□□□□ 0.52
HDGF-204ENST00000465180 CACNB3P54284 484 aa18.3■□□□□ 0.52
HDGF-204ENST00000465180 DLGAP5Q15398 846 aa18.3■□□□□ 0.52
HDGF-204ENST00000465180 C12orf60Q5U649 245 aa18.3■□□□□ 0.52
HDGF-204ENST00000465180 Q6ZUG5 572 aa18.3■□□□□ 0.52
HDGF-204ENST00000465180 MB21D2Q8IYB1 491 aaPredicted RBP18.3■□□□□ 0.52
HDGF-204ENST00000465180 NKX2-3Q8TAU0 364 aa18.3■□□□□ 0.52
HDGF-204ENST00000465180 RNF41Q9H4P4 317 aaPredicted RBP18.3■□□□□ 0.52
HDGF-204ENST00000465180 TDRD3Q9H7E2 651 aaKnown RBP18.3■□□□□ 0.52
HDGF-204ENST00000465180 DDX4Q9NQI0 724 aaKnown RBP18.3■□□□□ 0.52
HDGF-204ENST00000465180 ZNF541Q9H0D2 1346 aa18.29■□□□□ 0.52
HDGF-204ENST00000465180 BRD2P25440 801 aaKnown RBP18.29■□□□□ 0.52
HDGF-204ENST00000465180 CNNM2Q9H8M5 875 aa18.29■□□□□ 0.52
HDGF-204ENST00000465180 SHTN1A0MZ66 631 aa18.29■□□□□ 0.52
HDGF-204ENST00000465180 PRC1O43663 620 aa18.29■□□□□ 0.52
HDGF-204ENST00000465180 PLCD1P51178 756 aa18.29■□□□□ 0.52
HDGF-204ENST00000465180 NFIAQ12857 509 aa18.29■□□□□ 0.52
HDGF-204ENST00000465180 TOB2Q14106 344 aaPredicted RBP18.29■□□□□ 0.52
HDGF-204ENST00000465180 TMX3Q96JJ7 454 aa18.29■□□□□ 0.52
HDGF-204ENST00000465180 KRT23Q9C075 422 aa18.29■□□□□ 0.52
HDGF-204ENST00000465180 ALDH8A1Q9H2A2 487 aaPredicted RBP18.29■□□□□ 0.52
HDGF-204ENST00000465180 FOXD4L1Q9NU39 408 aa18.29■□□□□ 0.52
HDGF-204ENST00000465180 RBM27Q9P2N5 1060 aaKnown RBP18.29■□□□□ 0.52
HDGF-204ENST00000465180 LIMCH1Q9UPQ0 1083 aa18.29■□□□□ 0.52
HDGF-204ENST00000465180 KDM4AO75164 1064 aa18.28■□□□□ 0.52
HDGF-204ENST00000465180 SLC3A2P08195 630 aaKnown RBP18.28■□□□□ 0.52
HDGF-204ENST00000465180 RPS12P25398 132 aaKnown RBP18.28■□□□□ 0.52
HDGF-204ENST00000465180 GMPSP49915 693 aaPredicted RBP18.28■□□□□ 0.52
HDGF-204ENST00000465180 ANKRD1Q15327 319 aa18.28■□□□□ 0.52
HDGF-204ENST00000465180 CYB5R4Q7L1T6 521 aa18.28■□□□□ 0.52
HDGF-204ENST00000465180 KIAA1524Q8TCG1 905 aa18.28■□□□□ 0.52
HDGF-204ENST00000465180 RNF181Q9P0P0 153 aa18.28■□□□□ 0.52
HDGF-204ENST00000465180 SPDYE2BA6NHP3 402 aa18.27■□□□□ 0.52
HDGF-204ENST00000465180 PRDM1O75626 825 aa18.27■□□□□ 0.52
HDGF-204ENST00000465180 SPDYE6P0CI01 402 aa18.27■□□□□ 0.52
HDGF-204ENST00000465180 ANTXR2P58335 489 aa18.27■□□□□ 0.52
HDGF-204ENST00000465180 KRT222Q8N1A0 295 aa18.27■□□□□ 0.52
HDGF-204ENST00000465180 GEMIN8Q9NWZ8 242 aaKnown RBP18.27■□□□□ 0.52
HDGF-204ENST00000465180 ZSWIM5Q9P217 1185 aa18.27■□□□□ 0.52
HDGF-204ENST00000465180 BRF1Q92994 677 aa18.27■□□□□ 0.51
HDGF-204ENST00000465180 DYNLL2Q96FJ2 89 aa18.27■□□□□ 0.51
HDGF-204ENST00000465180 FAM53CQ9NYF3 392 aa18.27■□□□□ 0.51
HDGF-204ENST00000465180 LAMA4Q16363 1823 aa18.27■□□□□ 0.51
HDGF-204ENST00000465180 NCBP1Q09161 790 aaKnown RBP18.26■□□□□ 0.51
HDGF-204ENST00000465180 TCP10Q12799 353 aa18.26■□□□□ 0.51
HDGF-204ENST00000465180 IDI2Q9BXS1 227 aa18.26■□□□□ 0.51
HDGF-204ENST00000465180 MYOZ2Q9NPC6 264 aa18.26■□□□□ 0.51
HDGF-204ENST00000465180 CAPN2P17655 700 aa18.26■□□□□ 0.51
HDGF-204ENST00000465180 PDE4BQ07343 736 aa18.26■□□□□ 0.51
HDGF-204ENST00000465180 RBM26Q5T8P6 1007 aaKnown RBP18.26■□□□□ 0.51
HDGF-204ENST00000465180 DPF2Q92785 391 aa18.26■□□□□ 0.51
HDGF-204ENST00000465180 OSBPL5Q9H0X9 879 aaPredicted RBP18.26■□□□□ 0.51
HDGF-204ENST00000465180 GPHNQ9NQX3 736 aaPredicted RBP18.26■□□□□ 0.51
HDGF-204ENST00000465180 CNOT7Q9UIV1 285 aaKnown RBP18.26■□□□□ 0.51
HDGF-204ENST00000465180 TPCN1Q9ULQ1 816 aa18.26■□□□□ 0.51
HDGF-204ENST00000465180 CLRN2A0PK11 232 aa18.25■□□□□ 0.51
HDGF-204ENST00000465180 RANBP6O60518 1105 aaKnown RBP18.25■□□□□ 0.51
HDGF-204ENST00000465180 FGRP09769 529 aa18.25■□□□□ 0.51
HDGF-204ENST00000465180 C9orf131Q5VYM1 1079 aa18.25■□□□□ 0.51
HDGF-204ENST00000465180 ZFPM1Q8IX07 1006 aa18.25■□□□□ 0.51
HDGF-204ENST00000465180 MICALL2Q8IY33 904 aa18.25■□□□□ 0.51
HDGF-204ENST00000465180 ESR2Q92731 530 aa18.25■□□□□ 0.51
HDGF-204ENST00000465180 FAM198AQ9UFP1 575 aa18.25■□□□□ 0.51
HDGF-204ENST00000465180 TIAM2Q8IVF5 1701 aa18.24■□□□□ 0.51
HDGF-204ENST00000465180 LARGE1O95461 756 aa18.24■□□□□ 0.51
HDGF-204ENST00000465180 PCP11498 1178 aaKnown RBP18.24■□□□□ 0.51
HDGF-204ENST00000465180 MTMR14Q8NCE2 650 aa18.24■□□□□ 0.51
HDGF-204ENST00000465180 ZNF70Q9UC06 446 aaPredicted RBP18.24■□□□□ 0.51
HDGF-204ENST00000465180 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.24■□□□□ 0.512e-6■■■■■ 37.3
HDGF-204ENST00000465180 CDK5RAP2Q96SN8 1893 aa18.24■□□□□ 0.51
HDGF-204ENST00000465180 ZNF280AP59817 542 aaPredicted RBP18.24■□□□□ 0.51
HDGF-204ENST00000465180 APOBRQ0VD83 1088 aa18.24■□□□□ 0.51
HDGF-204ENST00000465180 ME3Q16798 604 aa18.24■□□□□ 0.51
HDGF-204ENST00000465180 TTC6Q86TZ1 520 aa18.24■□□□□ 0.51
HDGF-204ENST00000465180 ZSCAN31Q96LW9 406 aaPredicted RBP18.24■□□□□ 0.51
HDGF-204ENST00000465180 ZKSCAN3Q9BRR0 538 aa18.24■□□□□ 0.51
HDGF-204ENST00000465180 MKNK2Q9HBH9 465 aa18.24■□□□□ 0.51
HDGF-204ENST00000465180 TMOD2Q9NZR1 351 aa18.24■□□□□ 0.51
HDGF-204ENST00000465180 WDR19Q8NEZ3 1342 aa18.23■□□□□ 0.51
HDGF-204ENST00000465180 WNT10BO00744 389 aa18.23■□□□□ 0.51
HDGF-204ENST00000465180 NBPF9Q3BBW0 867 aa18.23■□□□□ 0.51
HDGF-204ENST00000465180 GPC2Q8N158 579 aa18.23■□□□□ 0.51
HDGF-204ENST00000465180 SLC44A5Q8NCS7 719 aa18.23■□□□□ 0.51
HDGF-204ENST00000465180 SECISBP2LQ93073 1101 aaKnown RBP18.23■□□□□ 0.51
HDGF-204ENST00000465180 AGXT2Q9BYV1 514 aa18.23■□□□□ 0.51
HDGF-204ENST00000465180 NAV1Q8NEY1 1877 aa18.23■□□□□ 0.51
HDGF-204ENST00000465180 SMTNL1A8MU46 457 aa18.22■□□□□ 0.51
HDGF-204ENST00000465180 TCP10L2B9ZVM9 353 aa18.22■□□□□ 0.51
HDGF-204ENST00000465180 IFIT3O14879 490 aaKnown RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms