RNA–Protein interactions for RNA: ENST00000460110.5

NUDCD3-203, Transcript of NudC domain containing 3, humanhuman

TSL 1 (best)

Gene NUDCD3, Length 3,641 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-203ENST00000460110 TJP1Q07157 1748 aa10.79□□□□□ -0.68
NUDCD3-203ENST00000460110 TULP1O00294 542 aaPredicted RBP10.79□□□□□ -0.68
NUDCD3-203ENST00000460110 TYRO3Q06418 890 aa10.79□□□□□ -0.68
NUDCD3-203ENST00000460110 LRRC47Q8N1G4 583 aaKnown RBP10.79□□□□□ -0.68
NUDCD3-203ENST00000460110 FLAD1Q8NFF5 587 aa10.79□□□□□ -0.68
NUDCD3-203ENST00000460110 RASGRP4Q8TDF6 673 aa10.79□□□□□ -0.68
NUDCD3-203ENST00000460110 ATP6V0A2Q9Y487 856 aa10.79□□□□□ -0.68
NUDCD3-203ENST00000460110 MRVI1Q9Y6F6 885 aa10.79□□□□□ -0.68
NUDCD3-203ENST00000460110 LETM1O95202 739 aaPredicted RBP10.79□□□□□ -0.68
NUDCD3-203ENST00000460110 ZNF174Q15697 407 aa10.79□□□□□ -0.68
NUDCD3-203ENST00000460110 SLC15A2Q16348 729 aa10.79□□□□□ -0.68
NUDCD3-203ENST00000460110 CCDC96Q2M329 555 aa10.79□□□□□ -0.68
NUDCD3-203ENST00000460110 FAM43AQ8N2R8 423 aa10.79□□□□□ -0.68
NUDCD3-203ENST00000460110 MRPS27Q92552 414 aaKnown RBP10.79□□□□□ -0.68
NUDCD3-203ENST00000460110 VEZTQ9HBM0 779 aa10.79□□□□□ -0.68
NUDCD3-203ENST00000460110 GPCPD1Q9NPB8 672 aa10.79□□□□□ -0.68
NUDCD3-203ENST00000460110 DDX19AQ9NUU7 478 aaKnown RBP10.79□□□□□ -0.68
NUDCD3-203ENST00000460110 PCDHAC2Q9Y5I4 1007 aa10.79□□□□□ -0.68
NUDCD3-203ENST00000460110 DEXIO95424 95 aa10.78□□□□□ -0.68
NUDCD3-203ENST00000460110 ZNF165P49910 485 aa10.78□□□□□ -0.68
NUDCD3-203ENST00000460110 CCDC173Q0VFZ6 552 aa10.78□□□□□ -0.68
NUDCD3-203ENST00000460110 TICAM2Q86XR7 235 aa10.78□□□□□ -0.68
NUDCD3-203ENST00000460110 SP8Q8IXZ3 490 aa10.78□□□□□ -0.68
NUDCD3-203ENST00000460110 TCHHQ07283 1943 aa10.78□□□□□ -0.68
NUDCD3-203ENST00000460110 NUP188Q5SRE5 1749 aa10.78□□□□□ -0.68
NUDCD3-203ENST00000460110 FAM205CA6NFA0 338 aa10.78□□□□□ -0.68
NUDCD3-203ENST00000460110 LARGE2Q8N3Y3 721 aa10.78□□□□□ -0.68
NUDCD3-203ENST00000460110 CRAMP1Q96RY5 1269 aa10.78□□□□□ -0.68
NUDCD3-203ENST00000460110 COL1A1P02452 1464 aaPredicted RBP10.78□□□□□ -0.68
NUDCD3-203ENST00000460110 CLRN2A0PK11 232 aa10.78□□□□□ -0.68
NUDCD3-203ENST00000460110 ADCY5O95622 1261 aa10.78□□□□□ -0.68
NUDCD3-203ENST00000460110 USP17L2Q6R6M4 530 aa10.78□□□□□ -0.68
NUDCD3-203ENST00000460110 JMYQ8N9B5 988 aa10.78□□□□□ -0.68
NUDCD3-203ENST00000460110 TBC1D22AQ8WUA7 517 aa10.78□□□□□ -0.68
NUDCD3-203ENST00000460110 FRMPD2Q68DX3 1309 aaPredicted RBP10.78□□□□□ -0.68
NUDCD3-203ENST00000460110 IFNAR1P17181 557 aa10.77□□□□□ -0.68
NUDCD3-203ENST00000460110 KIF5BP33176 963 aa10.77□□□□□ -0.68
NUDCD3-203ENST00000460110 NDUFA8P51970 172 aa10.77□□□□□ -0.68
NUDCD3-203ENST00000460110 PIK3AP1Q6ZUJ8 805 aa10.77□□□□□ -0.68
NUDCD3-203ENST00000460110 SGMS1Q86VZ5 419 aa10.77□□□□□ -0.68
NUDCD3-203ENST00000460110 STAG2Q8N3U4 1231 aa10.77□□□□□ -0.68
NUDCD3-203ENST00000460110 ZNF287Q9HBT7 754 aa10.77□□□□□ -0.68
NUDCD3-203ENST00000460110 FAM217BQ9NTX9 383 aaPredicted RBP10.77□□□□□ -0.68
NUDCD3-203ENST00000460110 N4BP2Q86UW6 1770 aaPredicted RBP10.77□□□□□ -0.69
NUDCD3-203ENST00000460110 PLSCR1O15162 318 aa10.77□□□□□ -0.69
NUDCD3-203ENST00000460110 MARCH6O60337 910 aa10.77□□□□□ -0.69
NUDCD3-203ENST00000460110 TEKT1Q969V4 418 aa10.77□□□□□ -0.69
NUDCD3-203ENST00000460110 CLIP2Q9UDT6 1046 aa10.77□□□□□ -0.69
NUDCD3-203ENST00000460110 DAGLAQ9Y4D2 1042 aa10.77□□□□□ -0.69
NUDCD3-203ENST00000460110 MROH7-TTC4A0A0A0MT08 1334 aa10.77□□□□□ -0.69
NUDCD3-203ENST00000460110 ESPNB1AK53 854 aa10.77□□□□□ -0.69
NUDCD3-203ENST00000460110 PLCG2P16885 1265 aa10.77□□□□□ -0.69
NUDCD3-203ENST00000460110 MCM7P33993 719 aa10.77□□□□□ -0.69
NUDCD3-203ENST00000460110 SYKP43405 635 aa10.77□□□□□ -0.69
NUDCD3-203ENST00000460110 CDK8P49336 464 aa10.77□□□□□ -0.69
NUDCD3-203ENST00000460110 C12orf60Q5U649 245 aa10.77□□□□□ -0.69
NUDCD3-203ENST00000460110 BRAPQ7Z569 592 aa10.77□□□□□ -0.69
NUDCD3-203ENST00000460110 KCNG4Q8TDN1 519 aa10.77□□□□□ -0.69
NUDCD3-203ENST00000460110 STAMQ92783 540 aa10.77□□□□□ -0.69
NUDCD3-203ENST00000460110 GOLPH3LQ9H4A5 285 aa10.77□□□□□ -0.69
NUDCD3-203ENST00000460110 PAPPAQ13219 1627 aa10.77□□□□□ -0.69
NUDCD3-203ENST00000460110 VEGFAP15692 232 aaPredicted RBP10.76□□□□□ -0.69
NUDCD3-203ENST00000460110 DHX8Q14562 1220 aaKnown RBP10.76□□□□□ -0.69
NUDCD3-203ENST00000460110 CRY2Q49AN0 593 aa10.76□□□□□ -0.69
NUDCD3-203ENST00000460110 LINC00301Q8NCQ3 95 aa10.76□□□□□ -0.69
NUDCD3-203ENST00000460110 ZNF277Q9NRM2 450 aaPredicted RBP10.76□□□□□ -0.69
NUDCD3-203ENST00000460110 RCOR1Q9UKL0 485 aa10.76□□□□□ -0.69
NUDCD3-203ENST00000460110 FMNL1O95466 1100 aaPredicted RBP10.76□□□□□ -0.69
NUDCD3-203ENST00000460110 ILDR1Q86SU0 546 aaPredicted RBP10.76□□□□□ -0.69
NUDCD3-203ENST00000460110 NOSTRINQ8IVI9 506 aa10.76□□□□□ -0.69
NUDCD3-203ENST00000460110 PLIN2Q99541 437 aa10.76□□□□□ -0.69
NUDCD3-203ENST00000460110 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.76□□□□□ -0.69
NUDCD3-203ENST00000460110 COA1Q9GZY4 146 aa10.76□□□□□ -0.69
NUDCD3-203ENST00000460110 HLA-DOAP06340 250 aa10.76□□□□□ -0.69
NUDCD3-203ENST00000460110 AFMP43652 599 aa10.76□□□□□ -0.69
NUDCD3-203ENST00000460110 NFIAQ12857 509 aa10.76□□□□□ -0.69
NUDCD3-203ENST00000460110 TMEM87AQ8NBN3 555 aa10.76□□□□□ -0.69
NUDCD3-203ENST00000460110 CNNM3Q8NE01 707 aa10.76□□□□□ -0.69
NUDCD3-203ENST00000460110 ZBTB12Q9Y330 459 aaPredicted RBP10.76□□□□□ -0.69
NUDCD3-203ENST00000460110 NRAPQ86VF7 1730 aa10.76□□□□□ -0.69
NUDCD3-203ENST00000460110 TCP10L2B9ZVM9 353 aa10.75□□□□□ -0.69
NUDCD3-203ENST00000460110 TDRD3Q9H7E2 651 aaKnown RBP10.75□□□□□ -0.69
NUDCD3-203ENST00000460110 PCDHB6Q9Y5E3 794 aa10.75□□□□□ -0.69
NUDCD3-203ENST00000460110 COL4A1P02462 1669 aa10.75□□□□□ -0.69
NUDCD3-203ENST00000460110 A0A0U1RQG5 324 aaPredicted RBP10.75□□□□□ -0.69
NUDCD3-203ENST00000460110 CCDC194A0A1B0GVG4 234 aa10.75□□□□□ -0.69
NUDCD3-203ENST00000460110 ECE2O60344 883 aa10.75□□□□□ -0.69
NUDCD3-203ENST00000460110 FAM160A1Q05DH4 1040 aa10.75□□□□□ -0.69
NUDCD3-203ENST00000460110 NTRK3Q16288 839 aa10.75□□□□□ -0.69
NUDCD3-203ENST00000460110 NOM1Q5C9Z4 860 aaKnown RBP10.75□□□□□ -0.69
NUDCD3-203ENST00000460110 CERS5Q8N5B7 392 aa10.75□□□□□ -0.69
NUDCD3-203ENST00000460110 SRBD1Q8N5C6 995 aaKnown RBP10.75□□□□□ -0.69
NUDCD3-203ENST00000460110 CNKSR1Q969H4 720 aa10.75□□□□□ -0.69
NUDCD3-203ENST00000460110 RRAGDQ9NQL2 400 aaPredicted RBP10.75□□□□□ -0.69
NUDCD3-203ENST00000460110 PSDA5PKW4 1024 aaPredicted RBP10.75□□□□□ -0.69
NUDCD3-203ENST00000460110 KLRF2D3W0D1 207 aa10.75□□□□□ -0.69
NUDCD3-203ENST00000460110 ZNF202O95125 648 aa10.75□□□□□ -0.69
NUDCD3-203ENST00000460110 CDC25AP30304 524 aa10.75□□□□□ -0.69
NUDCD3-203ENST00000460110 KRT2P35908 639 aa10.75□□□□□ -0.69
NUDCD3-203ENST00000460110 NAPAP54920 295 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms