RNA–Protein interactions for RNA: ENST00000456210.5

SEMA3B-208, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 2,065 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-208ENST00000456210 CCDC51Q96ER9 411 aa21.5■■□□□ 1.03
SEMA3B-208ENST00000456210 MED4Q9NPJ6 270 aa21.5■■□□□ 1.03
SEMA3B-208ENST00000456210 TTF2Q9UNY4 1162 aaKnown RBP21.5■■□□□ 1.03
SEMA3B-208ENST00000456210 AFF2P51816 1311 aa21.5■■□□□ 1.03
SEMA3B-208ENST00000456210 BCL9LQ86UU0 1499 aa21.5■■□□□ 1.03
SEMA3B-208ENST00000456210 SLIT2O94813 1529 aa21.49■■□□□ 1.03
SEMA3B-208ENST00000456210 RANBP6O60518 1105 aaKnown RBP21.49■■□□□ 1.03
SEMA3B-208ENST00000456210 N4BP1O75113 896 aaKnown RBP21.49■■□□□ 1.03
SEMA3B-208ENST00000456210 MFAP3LO75121 409 aa21.49■■□□□ 1.03
SEMA3B-208ENST00000456210 RBL2Q08999 1139 aa21.49■■□□□ 1.03
SEMA3B-208ENST00000456210 ZNF569Q5MCW4 686 aa21.49■■□□□ 1.03
SEMA3B-208ENST00000456210 PPFIBP1Q86W92 1011 aa21.49■■□□□ 1.03
SEMA3B-208ENST00000456210 IGSF22Q8N9C0 903 aa21.49■■□□□ 1.03
SEMA3B-208ENST00000456210 SERTAD1Q9UHV2 236 aa21.49■■□□□ 1.03
SEMA3B-208ENST00000456210 VSNL1P62760 191 aa21.49■■□□□ 1.03
SEMA3B-208ENST00000456210 KIF4BQ2VIQ3 1234 aa21.49■■□□□ 1.03
SEMA3B-208ENST00000456210 SLC9C2Q5TAH2 1124 aa21.49■■□□□ 1.03
SEMA3B-208ENST00000456210 ZNF594Q96JF6 807 aaPredicted RBP21.49■■□□□ 1.03
SEMA3B-208ENST00000456210 TMEM87BQ96K49 555 aa21.49■■□□□ 1.03
SEMA3B-208ENST00000456210 ACBD3Q9H3P7 528 aa21.49■■□□□ 1.03
SEMA3B-208ENST00000456210 MYO1AQ9UBC5 1043 aa21.49■■□□□ 1.03
SEMA3B-208ENST00000456210 POLR2DO15514 142 aaKnown RBP21.48■■□□□ 1.03
SEMA3B-208ENST00000456210 TEX33O43247 280 aa21.48■■□□□ 1.03
SEMA3B-208ENST00000456210 ACTN4O43707 911 aaKnown RBP21.48■■□□□ 1.03
SEMA3B-208ENST00000456210 ZNF827Q17R98 1081 aa21.48■■□□□ 1.03
SEMA3B-208ENST00000456210 SGMS1Q86VZ5 419 aa21.48■■□□□ 1.03
SEMA3B-208ENST00000456210 TBC1D10CQ8IV04 446 aa21.48■■□□□ 1.03
SEMA3B-208ENST00000456210 PLCD3Q8N3E9 789 aa21.48■■□□□ 1.03
SEMA3B-208ENST00000456210 CEP126Q9P2H0 1117 aa21.48■■□□□ 1.03
SEMA3B-208ENST00000456210 ADD3Q9UEY8 706 aaKnown RBP21.48■■□□□ 1.03
SEMA3B-208ENST00000456210 USP21Q9UK80 565 aa21.48■■□□□ 1.03
SEMA3B-208ENST00000456210 AKAP2Q9Y2D5 859 aa21.48■■□□□ 1.03
SEMA3B-208ENST00000456210 NRAPQ86VF7 1730 aa21.48■■□□□ 1.03
SEMA3B-208ENST00000456210 MYH8P13535 1937 aa21.48■■□□□ 1.03
SEMA3B-208ENST00000456210 AKAP11Q9UKA4 1901 aa21.48■■□□□ 1.03
SEMA3B-208ENST00000456210 A0A0U1RQJ8 604 aa21.48■■□□□ 1.03
SEMA3B-208ENST00000456210 SEMA3EO15041 775 aa21.48■■□□□ 1.03
SEMA3B-208ENST00000456210 ZBTB43O43298 467 aa21.48■■□□□ 1.03
SEMA3B-208ENST00000456210 TOB1P50616 345 aaPredicted RBP21.48■■□□□ 1.03
SEMA3B-208ENST00000456210 HSP90B2PQ58FF3 399 aa21.48■■□□□ 1.03
SEMA3B-208ENST00000456210 SPATA1Q5VX52 437 aa21.48■■□□□ 1.03
SEMA3B-208ENST00000456210 WDR93Q6P2C0 686 aa21.48■■□□□ 1.03
SEMA3B-208ENST00000456210 ATRIPQ8WXE1 791 aa21.48■■□□□ 1.03
SEMA3B-208ENST00000456210 NAPGQ99747 312 aaPredicted RBP21.48■■□□□ 1.03
SEMA3B-208ENST00000456210 FAM217BQ9NTX9 383 aaPredicted RBP21.48■■□□□ 1.03
SEMA3B-208ENST00000456210 FBXO3Q9UK99 471 aa21.48■■□□□ 1.03
SEMA3B-208ENST00000456210 ITIH6Q6UXX5 1313 aa21.48■■□□□ 1.03
SEMA3B-208ENST00000456210 PCDH11XQ9BZA7 1347 aa21.48■■□□□ 1.03
SEMA3B-208ENST00000456210 PCDH11YQ9BZA8 1340 aa21.48■■□□□ 1.03
SEMA3B-208ENST00000456210 NID2Q14112 1375 aa21.47■■□□□ 1.03
SEMA3B-208ENST00000456210 CHD4Q14839 1912 aa21.47■■□□□ 1.03
SEMA3B-208ENST00000456210 CTAGE15A4D2H0 777 aa21.47■■□□□ 1.03
SEMA3B-208ENST00000456210 CTAGE8P0CG41 777 aa21.47■■□□□ 1.03
SEMA3B-208ENST00000456210 SPECC1Q5M775 1068 aa21.47■■□□□ 1.03
SEMA3B-208ENST00000456210 CDKAL1Q5VV42 579 aa21.47■■□□□ 1.03
SEMA3B-208ENST00000456210 CTAGE6Q86UF2 777 aa21.47■■□□□ 1.03
SEMA3B-208ENST00000456210 CNGA4Q8IV77 575 aa21.47■■□□□ 1.03
SEMA3B-208ENST00000456210 CTAGE4Q8IX94 777 aa21.47■■□□□ 1.03
SEMA3B-208ENST00000456210 SLC35F6Q8N357 371 aa21.47■■□□□ 1.03
SEMA3B-208ENST00000456210 FNBP4Q8N3X1 1017 aaPredicted RBP21.47■■□□□ 1.03
SEMA3B-208ENST00000456210 XAGE2Q96GT9 111 aa21.47■■□□□ 1.03
SEMA3B-208ENST00000456210 CTAGE1Q96RT6 745 aa21.47■■□□□ 1.03
SEMA3B-208ENST00000456210 VIPAS39Q9H9C1 493 aa21.47■■□□□ 1.03
SEMA3B-208ENST00000456210 SUGCTQ9HAC7 445 aa21.47■■□□□ 1.03
SEMA3B-208ENST00000456210 RXRAP19793 462 aa21.46■■□□□ 1.03
SEMA3B-208ENST00000456210 CABP4P57796 275 aa21.46■■□□□ 1.03
SEMA3B-208ENST00000456210 GRIN1Q05586 938 aa21.46■■□□□ 1.03
SEMA3B-208ENST00000456210 MICU3Q86XE3 530 aa21.46■■□□□ 1.03
SEMA3B-208ENST00000456210 WASF1Q92558 559 aa21.46■■□□□ 1.03
SEMA3B-208ENST00000456210 PUS3Q9BZE2 481 aaKnown RBP21.46■■□□□ 1.03
SEMA3B-208ENST00000456210 DENND2AQ9ULE3 1009 aa21.46■■□□□ 1.03
SEMA3B-208ENST00000456210 EP400Q96L91 3159 aa21.46■■□□□ 1.03
SEMA3B-208ENST00000456210 FMNL1O95466 1100 aaPredicted RBP21.46■■□□□ 1.03
SEMA3B-208ENST00000456210 ADORA1P30542 326 aa21.46■■□□□ 1.03
SEMA3B-208ENST00000456210 SCARF1Q14162 830 aa21.46■■□□□ 1.03
SEMA3B-208ENST00000456210 RILPL1Q5EBL4 403 aa21.46■■□□□ 1.03
SEMA3B-208ENST00000456210 NKX2-3Q8TAU0 364 aa21.46■■□□□ 1.03
SEMA3B-208ENST00000456210 ZCRB1Q8TBF4 217 aaKnown RBP21.46■■□□□ 1.03
SEMA3B-208ENST00000456210 IGDCC4Q8TDY8 1250 aa21.46■■□□□ 1.03
SEMA3B-208ENST00000456210 YY1AP1Q9H869 796 aa21.46■■□□□ 1.03
SEMA3B-208ENST00000456210 GOLGA8AA7E2F4 631 aa21.45■■□□□ 1.02
SEMA3B-208ENST00000456210 MMP1P03956 469 aa21.45■■□□□ 1.02
SEMA3B-208ENST00000456210 ZAP70P43403 619 aa21.45■■□□□ 1.02
SEMA3B-208ENST00000456210 AARSP49588 968 aaKnown RBP eCLIP21.45■■□□□ 1.02
SEMA3B-208ENST00000456210 HSP90AB3PQ58FF7 597 aa21.45■■□□□ 1.02
SEMA3B-208ENST00000456210 CARD10Q9BWT7 1032 aa21.45■■□□□ 1.02
SEMA3B-208ENST00000456210 LY9Q9HBG7 655 aa21.45■■□□□ 1.02
SEMA3B-208ENST00000456210 SYNRGQ9UMZ2 1314 aa21.45■■□□□ 1.02
SEMA3B-208ENST00000456210 RHOXF2BP0C7M4 288 aa21.44■■□□□ 1.02
SEMA3B-208ENST00000456210 CORO7P57737 925 aa21.44■■□□□ 1.02
SEMA3B-208ENST00000456210 AMPD2Q01433 879 aa21.44■■□□□ 1.02
SEMA3B-208ENST00000456210 SSRP1Q08945 709 aaKnown RBP21.44■■□□□ 1.02
SEMA3B-208ENST00000456210 CUL4BQ13620 913 aa21.44■■□□□ 1.02
SEMA3B-208ENST00000456210 FOXR1Q6PIV2 292 aa21.44■■□□□ 1.02
SEMA3B-208ENST00000456210 LRRC31Q6UY01 552 aa21.44■■□□□ 1.02
SEMA3B-208ENST00000456210 RHOXF2Q9BQY4 288 aa21.44■■□□□ 1.02
SEMA3B-208ENST00000456210 FOXP1Q9H334 677 aaPredicted RBP21.44■■□□□ 1.02
SEMA3B-208ENST00000456210 SENP2Q9HC62 589 aa21.44■■□□□ 1.02
SEMA3B-208ENST00000456210 WWC3Q9ULE0 1092 aa21.44■■□□□ 1.02
SEMA3B-208ENST00000456210 SRPRBQ9Y5M8 271 aaKnown RBP21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms