RNA–Protein interactions for RNA: ENST00000455069.1

HDAC9-217, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-217ENST00000455069 STRBPQ96SI9 672 aaKnown RBP13.62□□□□□ -0.23
HDAC9-217ENST00000455069 FSD1Q9BTV5 496 aa13.62□□□□□ -0.23
HDAC9-217ENST00000455069 MCM9Q9NXL9 1143 aa13.62□□□□□ -0.23
HDAC9-217ENST00000455069 SERPINB13Q9UIV8 391 aa13.62□□□□□ -0.23
HDAC9-217ENST00000455069 GREB1LQ9C091 1923 aaPredicted RBP13.62□□□□□ -0.23
HDAC9-217ENST00000455069 CYP2D7A0A087X1C5 515 aa13.61□□□□□ -0.23
HDAC9-217ENST00000455069 GPR25O00155 361 aa13.61□□□□□ -0.23
HDAC9-217ENST00000455069 GPAA1O43292 621 aa13.61□□□□□ -0.23
HDAC9-217ENST00000455069 MYCNP04198 464 aaPredicted RBP13.61□□□□□ -0.23
HDAC9-217ENST00000455069 ZFYP08048 801 aaPredicted RBP13.61□□□□□ -0.23
HDAC9-217ENST00000455069 SHMT1P34896 483 aa13.61□□□□□ -0.23
HDAC9-217ENST00000455069 TATDN1Q6P1N9 297 aa13.61□□□□□ -0.23
HDAC9-217ENST00000455069 TTC6Q86TZ1 520 aa13.61□□□□□ -0.23
HDAC9-217ENST00000455069 SLC44A5Q8NCS7 719 aa13.61□□□□□ -0.23
HDAC9-217ENST00000455069 ZNF296Q8WUU4 475 aaPredicted RBP13.61□□□□□ -0.23
HDAC9-217ENST00000455069 OSBPL3Q9H4L5 887 aa13.61□□□□□ -0.23
HDAC9-217ENST00000455069 EPB41L4AQ9HCS5 686 aaPredicted RBP13.61□□□□□ -0.23
HDAC9-217ENST00000455069 ATP8A2Q9NTI2 1148 aa13.61□□□□□ -0.23
HDAC9-217ENST00000455069 SLC4A4Q9Y6R1 1079 aa13.61□□□□□ -0.23
HDAC9-217ENST00000455069 A0A0G2JLL6 359 aaPredicted RBP13.6□□□□□ -0.23
HDAC9-217ENST00000455069 TRIM75PA6NK02 468 aa13.6□□□□□ -0.23
HDAC9-217ENST00000455069 GSG1L2A8MUP6 293 aa13.6□□□□□ -0.23
HDAC9-217ENST00000455069 CXCL11O14625 94 aa13.6□□□□□ -0.23
HDAC9-217ENST00000455069 POLR3DP05423 398 aaPredicted RBP13.6□□□□□ -0.23
HDAC9-217ENST00000455069 NOM1Q5C9Z4 860 aaKnown RBP13.6□□□□□ -0.23
HDAC9-217ENST00000455069 ZMYM1Q5SVZ6 1142 aa13.6□□□□□ -0.23
HDAC9-217ENST00000455069 GPAT2Q6NUI2 795 aa13.6□□□□□ -0.23
HDAC9-217ENST00000455069 PRRT2Q7Z6L0 340 aaPredicted RBP13.6□□□□□ -0.23
HDAC9-217ENST00000455069 EVI5LQ96CN4 794 aa13.6□□□□□ -0.23
HDAC9-217ENST00000455069 ZBTB21Q9ULJ3 1066 aa13.6□□□□□ -0.23
HDAC9-217ENST00000455069 MGAMO43451 1857 aa13.59□□□□□ -0.23
HDAC9-217ENST00000455069 HTTP42858 3142 aa13.59□□□□□ -0.23
HDAC9-217ENST00000455069 USP17L12C9JPN9 530 aa13.59□□□□□ -0.23
HDAC9-217ENST00000455069 USP17L21D6R901 530 aa13.59□□□□□ -0.23
HDAC9-217ENST00000455069 FOXP2O15409 715 aa13.59□□□□□ -0.23
HDAC9-217ENST00000455069 TNRC18O15417 2968 aaPredicted RBP13.59□□□□□ -0.23
HDAC9-217ENST00000455069 ASNSP08243 561 aa13.59□□□□□ -0.23
HDAC9-217ENST00000455069 CAP1Q01518 475 aa13.59□□□□□ -0.23
HDAC9-217ENST00000455069 TAF1CQ15572 869 aaPredicted RBP13.59□□□□□ -0.23
HDAC9-217ENST00000455069 C12orf60Q5U649 245 aa13.59□□□□□ -0.23
HDAC9-217ENST00000455069 OTUD7BQ6GQQ9 843 aa13.59□□□□□ -0.23
HDAC9-217ENST00000455069 CTR9Q6PD62 1173 aa13.59□□□□□ -0.23
HDAC9-217ENST00000455069 DYNLL2Q96FJ2 89 aa13.59□□□□□ -0.23
HDAC9-217ENST00000455069 TRIM34Q9BYJ4 488 aa13.59□□□□□ -0.23
HDAC9-217ENST00000455069 ADGRA2Q96PE1 1338 aa13.59□□□□□ -0.23
HDAC9-217ENST00000455069 USP17L5A8MUK1 530 aa13.58□□□□□ -0.24
HDAC9-217ENST00000455069 GH2P01242 217 aa13.58□□□□□ -0.24
HDAC9-217ENST00000455069 GUCY1A2P33402 732 aa13.58□□□□□ -0.24
HDAC9-217ENST00000455069 SPP2Q13103 211 aa13.58□□□□□ -0.24
HDAC9-217ENST00000455069 CCDC129Q6ZRS4 1044 aa13.58□□□□□ -0.24
HDAC9-217ENST00000455069 ANKRD23Q86SG2 305 aa13.58□□□□□ -0.24
HDAC9-217ENST00000455069 ZNF280CQ8ND82 737 aa13.58□□□□□ -0.24
HDAC9-217ENST00000455069 ZCCHC17Q9NP64 241 aaKnown RBP13.58□□□□□ -0.24
HDAC9-217ENST00000455069 FOXD4L1Q9NU39 408 aa13.58□□□□□ -0.24
HDAC9-217ENST00000455069 A0A0D9SFI3 127 aa13.57□□□□□ -0.24
HDAC9-217ENST00000455069 PDHXO00330 501 aa13.57□□□□□ -0.24
HDAC9-217ENST00000455069 PKN2Q16513 984 aaKnown RBP13.57□□□□□ -0.24
HDAC9-217ENST00000455069 LRRFIP1Q32MZ4 808 aaKnown RBP13.57□□□□□ -0.24
HDAC9-217ENST00000455069 TREML2Q5T2D2 321 aa13.57□□□□□ -0.24
HDAC9-217ENST00000455069 FAM227BQ96M60 508 aa13.57□□□□□ -0.24
HDAC9-217ENST00000455069 WDR18Q9BV38 432 aa13.57□□□□□ -0.24
HDAC9-217ENST00000455069 LAMA4Q16363 1823 aa13.57□□□□□ -0.24
HDAC9-217ENST00000455069 ROBO3Q96MS0 1386 aa13.57□□□□□ -0.24
HDAC9-217ENST00000455069 PARP14Q460N5 1801 aa13.56□□□□□ -0.24
HDAC9-217ENST00000455069 TRIM6-TRIM34B2RNG4 842 aa13.56□□□□□ -0.24
HDAC9-217ENST00000455069 FKTNO75072 461 aa13.56□□□□□ -0.24
HDAC9-217ENST00000455069 GSPT1P15170 499 aaKnown RBP13.56□□□□□ -0.24
HDAC9-217ENST00000455069 HMGCS2P54868 508 aa13.56□□□□□ -0.24
HDAC9-217ENST00000455069 MTMR2Q13614 643 aa13.56□□□□□ -0.24
HDAC9-217ENST00000455069 ABCB5Q2M3G0 1257 aa13.56□□□□□ -0.24
HDAC9-217ENST00000455069 CERKLQ49MI3 558 aaPredicted RBP13.56□□□□□ -0.24
HDAC9-217ENST00000455069 SBK1Q52WX2 424 aa13.56□□□□□ -0.24
HDAC9-217ENST00000455069 SH3D19Q5HYK7 790 aa13.56□□□□□ -0.24
HDAC9-217ENST00000455069 GIMAP6Q6P9H5 292 aa13.56□□□□□ -0.24
HDAC9-217ENST00000455069 GADL1Q6ZQY3 521 aa13.56□□□□□ -0.24
HDAC9-217ENST00000455069 C16orf86Q6ZW13 317 aa13.56□□□□□ -0.24
HDAC9-217ENST00000455069 TBC1D2Q9BYX2 928 aa13.56□□□□□ -0.24
HDAC9-217ENST00000455069 ZFYVE28Q9HCC9 887 aa13.56□□□□□ -0.24
HDAC9-217ENST00000455069 GINM1Q9NU53 330 aa13.56□□□□□ -0.24
HDAC9-217ENST00000455069 ARPP21Q9UBL0 812 aaPredicted RBP13.56□□□□□ -0.24
HDAC9-217ENST00000455069 HPS5Q9UPZ3 1129 aa13.56□□□□□ -0.24
HDAC9-217ENST00000455069 RLFQ13129 1914 aa13.55□□□□□ -0.24
HDAC9-217ENST00000455069 MYH4Q9Y623 1939 aa13.55□□□□□ -0.24
HDAC9-217ENST00000455069 TLR2O60603 784 aa13.55□□□□□ -0.24
HDAC9-217ENST00000455069 CYP2C8P10632 490 aa13.55□□□□□ -0.24
HDAC9-217ENST00000455069 CDK8P49336 464 aa13.55□□□□□ -0.24
HDAC9-217ENST00000455069 SOX10P56693 466 aa13.55□□□□□ -0.24
HDAC9-217ENST00000455069 VPS53Q5VIR6 699 aa13.55□□□□□ -0.24
HDAC9-217ENST00000455069 FASTKD5Q7L8L6 764 aaKnown RBP13.55□□□□□ -0.24
HDAC9-217ENST00000455069 ZNF589Q86UQ0 364 aaPredicted RBP13.55□□□□□ -0.24
HDAC9-217ENST00000455069 PROCA1Q8NCQ7 364 aaPredicted RBP13.55□□□□□ -0.24
HDAC9-217ENST00000455069 RILPL2Q969X0 211 aa13.55□□□□□ -0.24
HDAC9-217ENST00000455069 AS3MTQ9HBK9 375 aa13.55□□□□□ -0.24
HDAC9-217ENST00000455069 SWAP70Q9UH65 585 aa13.55□□□□□ -0.24
HDAC9-217ENST00000455069 AGTPBP1Q9UPW5 1226 aa13.55□□□□□ -0.24
HDAC9-217ENST00000455069 DOCK3Q8IZD9 2030 aa13.54□□□□□ -0.24
HDAC9-217ENST00000455069 KIAA0100Q14667 2235 aaKnown RBP13.54□□□□□ -0.24
HDAC9-217ENST00000455069 PATL2C9JE40 543 aaKnown RBP13.54□□□□□ -0.24
HDAC9-217ENST00000455069 AKR1B1P15121 316 aa13.54□□□□□ -0.24
HDAC9-217ENST00000455069 GNAT2P19087 354 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms