RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 CCDC88AQ3V6T2 1871 aa14.38□□□□□ -0.11
ECHDC1-209ENST00000454591 USP27XA6NNY8 438 aa14.37□□□□□ -0.11
ECHDC1-209ENST00000454591 BIN1O00499 593 aa14.37□□□□□ -0.11
ECHDC1-209ENST00000454591 DDAH1O94760 285 aa14.37□□□□□ -0.11
ECHDC1-209ENST00000454591 SMC2O95347 1197 aa14.37□□□□□ -0.11
ECHDC1-209ENST00000454591 PRKCSHP14314 528 aaPredicted RBP14.37□□□□□ -0.11
ECHDC1-209ENST00000454591 XBP1P17861 261 aa14.37□□□□□ -0.11
ECHDC1-209ENST00000454591 SFPQP23246 707 aaKnown RBP eCLIP14.37□□□□□ -0.11
ECHDC1-209ENST00000454591 PNOCQ13519 176 aa14.37□□□□□ -0.11
ECHDC1-209ENST00000454591 E4F1Q66K89 784 aaPredicted RBP14.37□□□□□ -0.11
ECHDC1-209ENST00000454591 OLFM4Q6UX06 510 aa14.37□□□□□ -0.11
ECHDC1-209ENST00000454591 TMC6Q7Z403 805 aa14.37□□□□□ -0.11
ECHDC1-209ENST00000454591 VSTM4Q8IW00 320 aa14.37□□□□□ -0.11
ECHDC1-209ENST00000454591 SMAP1Q8IYB5 467 aaPredicted RBP14.37□□□□□ -0.11
ECHDC1-209ENST00000454591 ENOX1Q8TC92 643 aaKnown RBP14.37□□□□□ -0.11
ECHDC1-209ENST00000454591 PHF20Q9BVI0 1012 aa14.37□□□□□ -0.11
ECHDC1-209ENST00000454591 AATFQ9NY61 560 aaKnown RBP eCLIP14.37□□□□□ -0.11
ECHDC1-209ENST00000454591 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.37□□□□□ -0.11
ECHDC1-209ENST00000454591 PCDHA5Q9Y5H7 936 aa14.37□□□□□ -0.11
ECHDC1-209ENST00000454591 BAZ2AQ9UIF9 1905 aaKnown RBP14.37□□□□□ -0.11
ECHDC1-209ENST00000454591 TNKSO95271 1327 aa14.37□□□□□ -0.11
ECHDC1-209ENST00000454591 LTBP4Q8N2S1 1624 aa14.37□□□□□ -0.11
ECHDC1-209ENST00000454591 MORC3Q14149 939 aa14.36□□□□□ -0.11
ECHDC1-209ENST00000454591 ADGRA1Q86SQ6 560 aa14.36□□□□□ -0.11
ECHDC1-209ENST00000454591 PDCL2Q8N4E4 241 aa14.36□□□□□ -0.11
ECHDC1-209ENST00000454591 KIF18AQ8NI77 898 aa14.36□□□□□ -0.11
ECHDC1-209ENST00000454591 TSC1Q92574 1164 aa14.36□□□□□ -0.11
ECHDC1-209ENST00000454591 ZSCAN10Q96SZ4 725 aaPredicted RBP14.36□□□□□ -0.11
ECHDC1-209ENST00000454591 FEZ1Q99689 392 aa14.36□□□□□ -0.11
ECHDC1-209ENST00000454591 L2HGDHQ9H9P8 463 aa14.36□□□□□ -0.11
ECHDC1-209ENST00000454591 ACTN4O43707 911 aaKnown RBP14.36□□□□□ -0.11
ECHDC1-209ENST00000454591 ZNF18P17022 549 aa14.36□□□□□ -0.11
ECHDC1-209ENST00000454591 TBX2Q13207 712 aaPredicted RBP14.36□□□□□ -0.11
ECHDC1-209ENST00000454591 POSTNQ15063 836 aa14.36□□□□□ -0.11
ECHDC1-209ENST00000454591 PKN1Q16512 942 aa14.36□□□□□ -0.11
ECHDC1-209ENST00000454591 SBK1Q52WX2 424 aa14.36□□□□□ -0.11
ECHDC1-209ENST00000454591 CAVIN4Q5BKX8 364 aa14.36□□□□□ -0.11
ECHDC1-209ENST00000454591 RC3H1Q5TC82 1133 aaKnown RBP14.36□□□□□ -0.11
ECHDC1-209ENST00000454591 ENAHQ8N8S7 591 aaPredicted RBP14.36□□□□□ -0.11
ECHDC1-209ENST00000454591 TNFRSF25Q93038 417 aa14.36□□□□□ -0.11
ECHDC1-209ENST00000454591 CGNQ9P2M7 1197 aaKnown RBP14.36□□□□□ -0.11
ECHDC1-209ENST00000454591 MAN1B1Q9UKM7 699 aa14.36□□□□□ -0.11
ECHDC1-209ENST00000454591 MINPP1Q9UNW1 487 aa14.36□□□□□ -0.11
ECHDC1-209ENST00000454591 UBE2Q2LH0YL09 131 aa14.35□□□□□ -0.11
ECHDC1-209ENST00000454591 BMP6P22004 513 aa14.35□□□□□ -0.11
ECHDC1-209ENST00000454591 ERCC5P28715 1186 aaPredicted RBP14.35□□□□□ -0.11
ECHDC1-209ENST00000454591 LMOD1P29536 600 aaPredicted RBP14.35□□□□□ -0.11
ECHDC1-209ENST00000454591 UBASH3AP57075 661 aa14.35□□□□□ -0.11
ECHDC1-209ENST00000454591 RRP12Q5JTH9 1297 aaKnown RBP14.35□□□□□ -0.11
ECHDC1-209ENST00000454591 SH3RF1Q7Z6J0 888 aa14.35□□□□□ -0.11
ECHDC1-209ENST00000454591 MIGA1Q8NAN2 632 aa14.35□□□□□ -0.11
ECHDC1-209ENST00000454591 FERMT2Q96AC1 680 aa14.35□□□□□ -0.11
ECHDC1-209ENST00000454591 ERO1AQ96HE7 468 aa14.35□□□□□ -0.11
ECHDC1-209ENST00000454591 CCDC34Q96HJ3 373 aa14.35□□□□□ -0.11
ECHDC1-209ENST00000454591 FAM84BQ96KN1 310 aaPredicted RBP14.35□□□□□ -0.11
ECHDC1-209ENST00000454591 KCNJ14Q9UNX9 436 aa14.35□□□□□ -0.11
ECHDC1-209ENST00000454591 TAF1P21675 1872 aa14.34□□□□□ -0.11
ECHDC1-209ENST00000454591 TRIM75PA6NK02 468 aa14.34□□□□□ -0.11
ECHDC1-209ENST00000454591 ATP1A3P13637 1013 aa14.34□□□□□ -0.11
ECHDC1-209ENST00000454591 TROAPQ12815 778 aa14.34□□□□□ -0.11
ECHDC1-209ENST00000454591 ERFEQ4G0M1 354 aa14.34□□□□□ -0.11
ECHDC1-209ENST00000454591 ZNF384Q8TF68 577 aa14.34□□□□□ -0.11
ECHDC1-209ENST00000454591 SHISA4Q96DD7 197 aa14.34□□□□□ -0.11
ECHDC1-209ENST00000454591 PPP1R13BQ96KQ4 1090 aa14.34□□□□□ -0.11
ECHDC1-209ENST00000454591 NYXQ9GZU5 481 aa14.34□□□□□ -0.11
ECHDC1-209ENST00000454591 RAI14Q9P0K7 980 aa14.34□□□□□ -0.11
ECHDC1-209ENST00000454591 PCDHB6Q9Y5E3 794 aa14.34□□□□□ -0.11
ECHDC1-209ENST00000454591 KRT2P35908 639 aa14.33□□□□□ -0.12
ECHDC1-209ENST00000454591 TRAPPC10P48553 1259 aa14.33□□□□□ -0.12
ECHDC1-209ENST00000454591 CCDC93Q567U6 631 aa14.33□□□□□ -0.12
ECHDC1-209ENST00000454591 TMTC3Q6ZXV5 915 aa14.33□□□□□ -0.12
ECHDC1-209ENST00000454591 CATIPQ7Z7H3 387 aa14.33□□□□□ -0.12
ECHDC1-209ENST00000454591 IQCA1Q86XH1 822 aa14.33□□□□□ -0.12
ECHDC1-209ENST00000454591 FAM177A1Q8N128 213 aaPredicted RBP14.33□□□□□ -0.12
ECHDC1-209ENST00000454591 ZKSCAN3Q9BRR0 538 aa14.33□□□□□ -0.12
ECHDC1-209ENST00000454591 ANKRD2Q9GZV1 360 aa14.33□□□□□ -0.12
ECHDC1-209ENST00000454591 TOMM22Q9NS69 142 aa14.33□□□□□ -0.12
ECHDC1-209ENST00000454591 ATP8A2Q9NTI2 1148 aa14.33□□□□□ -0.12
ECHDC1-209ENST00000454591 PHLPP2Q6ZVD8 1323 aa14.33□□□□□ -0.12
ECHDC1-209ENST00000454591 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.32□□□□□ -0.12
ECHDC1-209ENST00000454591 GYG1P46976 350 aa14.32□□□□□ -0.12
ECHDC1-209ENST00000454591 AKAP17AQ02040 695 aaKnown RBP14.32□□□□□ -0.12
ECHDC1-209ENST00000454591 PDE4BQ07343 736 aa14.32□□□□□ -0.12
ECHDC1-209ENST00000454591 NR5A1Q13285 461 aa14.32□□□□□ -0.12
ECHDC1-209ENST00000454591 NPY5RQ15761 445 aa14.32□□□□□ -0.12
ECHDC1-209ENST00000454591 CTR9Q6PD62 1173 aa14.32□□□□□ -0.12
ECHDC1-209ENST00000454591 TMEM139Q8IV31 216 aa14.32□□□□□ -0.12
ECHDC1-209ENST00000454591 LINC00116Q8NCU8 138 aa14.32□□□□□ -0.12
ECHDC1-209ENST00000454591 OXER1Q8TDS5 423 aa14.32□□□□□ -0.12
ECHDC1-209ENST00000454591 SDR42E1Q8WUS8 393 aa14.32□□□□□ -0.12
ECHDC1-209ENST00000454591 DPF2Q92785 391 aa14.32□□□□□ -0.12
ECHDC1-209ENST00000454591 SMARCE1Q969G3 411 aa14.32□□□□□ -0.12
ECHDC1-209ENST00000454591 FBXW7Q969H0 707 aa14.32□□□□□ -0.12
ECHDC1-209ENST00000454591 NSUN4Q96CB9 384 aaKnown RBP14.32□□□□□ -0.12
ECHDC1-209ENST00000454591 ACSBG1Q96GR2 724 aa14.32□□□□□ -0.12
ECHDC1-209ENST00000454591 SERTAD1Q9UHV2 236 aa14.32□□□□□ -0.12
ECHDC1-209ENST00000454591 CNTNAP5Q8WYK1 1306 aa14.32□□□□□ -0.12
ECHDC1-209ENST00000454591 IRS2Q9Y4H2 1338 aa14.32□□□□□ -0.12
ECHDC1-209ENST00000454591 NHSQ6T4R5 1651 aa14.32□□□□□ -0.12
ECHDC1-209ENST00000454591 FAM177BA6PVY3 158 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms