RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 POLR3DP05423 398 aaPredicted RBP17.01■□□□□ 0.31
HDAC4-205ENST00000454542 ASNSP08243 561 aa17.01■□□□□ 0.31
HDAC4-205ENST00000454542 SHROOM1Q2M3G4 852 aaPredicted RBP17.01■□□□□ 0.31
HDAC4-205ENST00000454542 SBK1Q52WX2 424 aa17.01■□□□□ 0.31
HDAC4-205ENST00000454542 CENPQQ7L2Z9 268 aaPredicted RBP17.01■□□□□ 0.31
HDAC4-205ENST00000454542 CCDC84Q86UT8 332 aaPredicted RBP17.01■□□□□ 0.31
HDAC4-205ENST00000454542 FAM43AQ8N2R8 423 aa17.01■□□□□ 0.31
HDAC4-205ENST00000454542 ZHX2Q9Y6X8 837 aa17.01■□□□□ 0.31
HDAC4-205ENST00000454542 TTC22Q5TAA0 569 aa17■□□□□ 0.31
HDAC4-205ENST00000454542 CTR9Q6PD62 1173 aa17■□□□□ 0.31
HDAC4-205ENST00000454542 TRIM34Q9BYJ4 488 aa17■□□□□ 0.31
HDAC4-205ENST00000454542 HELLSQ9NRZ9 838 aa17■□□□□ 0.31
HDAC4-205ENST00000454542 SWAP70Q9UH65 585 aa17■□□□□ 0.31
HDAC4-205ENST00000454542 LAMA4Q16363 1823 aa17■□□□□ 0.31
HDAC4-205ENST00000454542 USP17L5A8MUK1 530 aa16.99■□□□□ 0.31
HDAC4-205ENST00000454542 BTBD19C9JJ37 291 aa16.99■□□□□ 0.31
HDAC4-205ENST00000454542 USP17L12C9JPN9 530 aa16.99■□□□□ 0.31
HDAC4-205ENST00000454542 USP17L21D6R901 530 aa16.99■□□□□ 0.31
HDAC4-205ENST00000454542 SMIM22K7EJ46 135 aa16.99■□□□□ 0.31
HDAC4-205ENST00000454542 GDF11O95390 407 aa16.99■□□□□ 0.31
HDAC4-205ENST00000454542 CENPBP07199 599 aaPredicted RBP16.99■□□□□ 0.31
HDAC4-205ENST00000454542 C16orf86Q6ZW13 317 aa16.99■□□□□ 0.31
HDAC4-205ENST00000454542 ANKRD23Q86SG2 305 aa16.99■□□□□ 0.31
HDAC4-205ENST00000454542 DDRGK1Q96HY6 314 aa16.99■□□□□ 0.31
HDAC4-205ENST00000454542 FAM227BQ96M60 508 aa16.99■□□□□ 0.31
HDAC4-205ENST00000454542 WDR18Q9BV38 432 aa16.99■□□□□ 0.31
HDAC4-205ENST00000454542 ZMYM6O95789 1325 aa16.98■□□□□ 0.31
HDAC4-205ENST00000454542 ADGRA2Q96PE1 1338 aa16.98■□□□□ 0.31
HDAC4-205ENST00000454542 CYP2D7A0A087X1C5 515 aa16.98■□□□□ 0.31
HDAC4-205ENST00000454542 TRIM6-TRIM34B2RNG4 842 aa16.98■□□□□ 0.31
HDAC4-205ENST00000454542 NMIQ13287 307 aaPredicted RBP16.98■□□□□ 0.31
HDAC4-205ENST00000454542 SH3D19Q5HYK7 790 aa16.98■□□□□ 0.31
HDAC4-205ENST00000454542 OTUD7BQ6GQQ9 843 aa16.98■□□□□ 0.31
HDAC4-205ENST00000454542 GPAT2Q6NUI2 795 aa16.98■□□□□ 0.31
HDAC4-205ENST00000454542 SLC44A5Q8NCS7 719 aa16.98■□□□□ 0.31
HDAC4-205ENST00000454542 ZNF280CQ8ND82 737 aa16.98■□□□□ 0.31
HDAC4-205ENST00000454542 R3HDMLQ9H3Y0 253 aa16.98■□□□□ 0.31
HDAC4-205ENST00000454542 AS3MTQ9HBK9 375 aa16.98■□□□□ 0.31
HDAC4-205ENST00000454542 CASP8AP2Q9UKL3 1982 aa16.98■□□□□ 0.31
HDAC4-205ENST00000454542 PATL2C9JE40 543 aaKnown RBP16.97■□□□□ 0.31
HDAC4-205ENST00000454542 TBC1D8O95759 1140 aa16.97■□□□□ 0.31
HDAC4-205ENST00000454542 GH2P01242 217 aa16.97■□□□□ 0.31
HDAC4-205ENST00000454542 SDSP20132 328 aa16.97■□□□□ 0.31
HDAC4-205ENST00000454542 GUCY1A2P33402 732 aa16.97■□□□□ 0.31
HDAC4-205ENST00000454542 CRHR2Q13324 411 aa16.97■□□□□ 0.31
HDAC4-205ENST00000454542 CERKLQ49MI3 558 aaPredicted RBP16.97■□□□□ 0.31
HDAC4-205ENST00000454542 COL13A1Q5TAT6 717 aaPredicted RBP16.97■□□□□ 0.31
HDAC4-205ENST00000454542 CCDC129Q6ZRS4 1044 aa16.97■□□□□ 0.31
HDAC4-205ENST00000454542 ZNF589Q86UQ0 364 aaPredicted RBP16.97■□□□□ 0.31
HDAC4-205ENST00000454542 AMOTL1Q8IY63 956 aa16.97■□□□□ 0.31
HDAC4-205ENST00000454542 IFNL3Q8IZI9 196 aa16.97■□□□□ 0.31
HDAC4-205ENST00000454542 RILPL2Q969X0 211 aa16.97■□□□□ 0.31
HDAC4-205ENST00000454542 DYNLL2Q96FJ2 89 aa16.97■□□□□ 0.31
HDAC4-205ENST00000454542 SLC45A1Q9Y2W3 748 aa16.97■□□□□ 0.31
HDAC4-205ENST00000454542 TRIM75PA6NK02 468 aa16.96■□□□□ 0.31
HDAC4-205ENST00000454542 GPR25O00155 361 aa16.96■□□□□ 0.31
HDAC4-205ENST00000454542 MCMDC2Q4G0Z9 681 aa16.96■□□□□ 0.31
HDAC4-205ENST00000454542 PROCA1Q8NCQ7 364 aaPredicted RBP16.96■□□□□ 0.31
HDAC4-205ENST00000454542 CCDC171Q6TFL3 1326 aa16.96■□□□□ 0.3
HDAC4-205ENST00000454542 TDO2P48775 406 aa16.95■□□□□ 0.3
HDAC4-205ENST00000454542 CDK8P49336 464 aa16.95■□□□□ 0.3
HDAC4-205ENST00000454542 SPP2Q13103 211 aa16.95■□□□□ 0.3
HDAC4-205ENST00000454542 TAF1CQ15572 869 aaPredicted RBP16.95■□□□□ 0.3
HDAC4-205ENST00000454542 ABCB5Q2M3G0 1257 aa16.95■□□□□ 0.3
HDAC4-205ENST00000454542 VPS53Q5VIR6 699 aa16.95■□□□□ 0.3
HDAC4-205ENST00000454542 FASTKD5Q7L8L6 764 aaKnown RBP16.95■□□□□ 0.3
HDAC4-205ENST00000454542 PLIN4Q96Q06 1357 aa16.94■□□□□ 0.3
HDAC4-205ENST00000454542 HIP1O00291 1037 aa16.94■□□□□ 0.3
HDAC4-205ENST00000454542 NEFLP07196 543 aa16.94■□□□□ 0.3
HDAC4-205ENST00000454542 BACE1P56817 501 aa16.94■□□□□ 0.3
HDAC4-205ENST00000454542 ALX1Q15699 326 aa16.94■□□□□ 0.3
HDAC4-205ENST00000454542 ZNF296Q8WUU4 475 aaPredicted RBP16.94■□□□□ 0.3
HDAC4-205ENST00000454542 C12orf42Q96LP6 360 aa16.94■□□□□ 0.3
HDAC4-205ENST00000454542 NACAP1Q9BZK3 213 aa16.94■□□□□ 0.3
HDAC4-205ENST00000454542 AGTPBP1Q9UPW5 1226 aa16.94■□□□□ 0.3
HDAC4-205ENST00000454542 PDHXO00330 501 aa16.93■□□□□ 0.3
HDAC4-205ENST00000454542 AKR1B1P15121 316 aa16.93■□□□□ 0.3
HDAC4-205ENST00000454542 MTMR2Q13614 643 aa16.93■□□□□ 0.3
HDAC4-205ENST00000454542 ERICH6BQ5W0A0 696 aa16.93■□□□□ 0.3
HDAC4-205ENST00000454542 TMEM179Q6ZVK1 233 aa16.93■□□□□ 0.3
HDAC4-205ENST00000454542 CCDC17Q96LX7 622 aa16.93■□□□□ 0.3
HDAC4-205ENST00000454542 NAPBQ9H115 298 aa16.93■□□□□ 0.3
HDAC4-205ENST00000454542 ZFYVE28Q9HCC9 887 aa16.93■□□□□ 0.3
HDAC4-205ENST00000454542 RAD50Q92878 1312 aa16.93■□□□□ 0.3
HDAC4-205ENST00000454542 ZSWIM8A7E2V4 1837 aa16.92■□□□□ 0.3
HDAC4-205ENST00000454542 C19orf81C9J6K1 198 aa16.92■□□□□ 0.3
HDAC4-205ENST00000454542 TLR2O60603 784 aa16.92■□□□□ 0.3
HDAC4-205ENST00000454542 RASA1P20936 1047 aa16.92■□□□□ 0.3
HDAC4-205ENST00000454542 HMGCS2P54868 508 aa16.92■□□□□ 0.3
HDAC4-205ENST00000454542 DGKZQ13574 1117 aa16.92■□□□□ 0.3
HDAC4-205ENST00000454542 TREML2Q5T2D2 321 aa16.92■□□□□ 0.3
HDAC4-205ENST00000454542 PARK7Q99497 189 aaKnown RBP16.92■□□□□ 0.3
HDAC4-205ENST00000454542 CABP5Q9NP86 173 aa16.92■□□□□ 0.3
HDAC4-205ENST00000454542 DIAPH3Q9NSV4 1193 aa16.92■□□□□ 0.3
HDAC4-205ENST00000454542 ANAPC4Q9UJX5 808 aa16.92■□□□□ 0.3
HDAC4-205ENST00000454542 A0A0G2JMZ2 1700 aa16.92■□□□□ 0.3
HDAC4-205ENST00000454542 USP17L10C9JJH3 530 aa16.91■□□□□ 0.3
HDAC4-205ENST00000454542 FKTNO75072 461 aa16.91■□□□□ 0.3
HDAC4-205ENST00000454542 APPP05067 770 aa16.91■□□□□ 0.3
HDAC4-205ENST00000454542 HSPD1P10809 573 aaKnown RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms