RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 KLHL3Q9UH77 587 aa5.86□□□□□ -1.47
HMGN3P1-201ENST00000453847 ADAM30Q9UKF2 790 aa5.86□□□□□ -1.47
HMGN3P1-201ENST00000453847 FAN1Q9Y2M0 1017 aa5.86□□□□□ -1.47
HMGN3P1-201ENST00000453847 HIF3AQ9Y2N7 669 aa5.86□□□□□ -1.47
HMGN3P1-201ENST00000453847 ATP8A1Q9Y2Q0 1164 aa5.86□□□□□ -1.47
HMGN3P1-201ENST00000453847 LOC100289279A0A1B0GTE1 492 aa5.85□□□□□ -1.47
HMGN3P1-201ENST00000453847 IRS4O14654 1257 aaPredicted RBP5.85□□□□□ -1.47
HMGN3P1-201ENST00000453847 RAPGEF3O95398 923 aa5.85□□□□□ -1.47
HMGN3P1-201ENST00000453847 PGRP06401 933 aa5.85□□□□□ -1.47
HMGN3P1-201ENST00000453847 MYCLP1P12525 358 aaPredicted RBP5.85□□□□□ -1.47
HMGN3P1-201ENST00000453847 STAT3P40763 770 aa5.85□□□□□ -1.47
HMGN3P1-201ENST00000453847 COL9A3Q14050 684 aaPredicted RBP5.85□□□□□ -1.47
HMGN3P1-201ENST00000453847 SETDB1Q15047 1291 aa5.85□□□□□ -1.47
HMGN3P1-201ENST00000453847 GNPTABQ3T906 1256 aa5.85□□□□□ -1.47
HMGN3P1-201ENST00000453847 PPM1JQ5JR12 505 aa5.85□□□□□ -1.47
HMGN3P1-201ENST00000453847 RNF180Q86T96 592 aa5.85□□□□□ -1.47
HMGN3P1-201ENST00000453847 DDX42Q86XP3 938 aaKnown RBP eCLIP5.85□□□□□ -1.47
HMGN3P1-201ENST00000453847 MCATQ8IVS2 390 aaKnown RBP5.85□□□□□ -1.47
HMGN3P1-201ENST00000453847 MFSD3Q96ES6 412 aa5.85□□□□□ -1.47
HMGN3P1-201ENST00000453847 SLC26A8Q96RN1 970 aa5.85□□□□□ -1.47
HMGN3P1-201ENST00000453847 EPN3Q9H201 632 aa5.85□□□□□ -1.47
HMGN3P1-201ENST00000453847 KCNK4Q9NYG8 393 aa5.85□□□□□ -1.47
HMGN3P1-201ENST00000453847 PRAMEF27A3QJZ7 478 aa5.84□□□□□ -1.47
HMGN3P1-201ENST00000453847 GSG1L2A8MUP6 293 aa5.84□□□□□ -1.47
HMGN3P1-201ENST00000453847 AOC2O75106 756 aa5.84□□□□□ -1.47
HMGN3P1-201ENST00000453847 UBOX5O94941 541 aa5.84□□□□□ -1.47
HMGN3P1-201ENST00000453847 S100BP04271 92 aaPredicted RBP5.84□□□□□ -1.47
HMGN3P1-201ENST00000453847 SDSP20132 328 aa5.84□□□□□ -1.47
HMGN3P1-201ENST00000453847 BRDTQ58F21 947 aaPredicted RBP5.84□□□□□ -1.47
HMGN3P1-201ENST00000453847 CCDC181Q5TID7 509 aa5.84□□□□□ -1.47
HMGN3P1-201ENST00000453847 UBE3DQ7Z6J8 389 aa5.84□□□□□ -1.47
HMGN3P1-201ENST00000453847 LRRC47Q8N1G4 583 aaKnown RBP5.84□□□□□ -1.47
HMGN3P1-201ENST00000453847 UBR7Q8N806 425 aa5.84□□□□□ -1.47
HMGN3P1-201ENST00000453847 ELMO3Q96BJ8 720 aa5.84□□□□□ -1.47
HMGN3P1-201ENST00000453847 SGSM3Q96HU1 749 aa5.84□□□□□ -1.47
HMGN3P1-201ENST00000453847 DHRS4Q9BTZ2 278 aa5.84□□□□□ -1.47
HMGN3P1-201ENST00000453847 LGR4Q9BXB1 951 aa5.84□□□□□ -1.47
HMGN3P1-201ENST00000453847 FBRSQ9HAH7 460 aa5.84□□□□□ -1.47
HMGN3P1-201ENST00000453847 NCOA5Q9HCD5 579 aaKnown RBP5.84□□□□□ -1.47
HMGN3P1-201ENST00000453847 JPH1Q9HDC5 661 aaPredicted RBP5.84□□□□□ -1.47
HMGN3P1-201ENST00000453847 PPP1R9AQ9ULJ8 1098 aa5.84□□□□□ -1.47
HMGN3P1-201ENST00000453847 FAM177BA6PVY3 158 aa5.83□□□□□ -1.48
HMGN3P1-201ENST00000453847 C9IYK1 514 aa5.83□□□□□ -1.48
HMGN3P1-201ENST00000453847 RBAK-RBAKDNI3L0D1 243 aa5.83□□□□□ -1.48
HMGN3P1-201ENST00000453847 ARL4DP49703 201 aa5.83□□□□□ -1.48
HMGN3P1-201ENST00000453847 PDE4BQ07343 736 aa5.83□□□□□ -1.48
HMGN3P1-201ENST00000453847 MLECQ14165 292 aa5.83□□□□□ -1.48
HMGN3P1-201ENST00000453847 PDE3AQ14432 1141 aa5.83□□□□□ -1.48
HMGN3P1-201ENST00000453847 SUZ12Q15022 739 aaKnown RBP5.83□□□□□ -1.48
HMGN3P1-201ENST00000453847 NKG7Q16617 165 aa5.83□□□□□ -1.48
HMGN3P1-201ENST00000453847 ZC3H12BQ5HYM0 836 aaKnown RBP5.83□□□□□ -1.48
HMGN3P1-201ENST00000453847 RNFT1Q5M7Z0 435 aa5.83□□□□□ -1.48
HMGN3P1-201ENST00000453847 FERMT3Q86UX7 667 aa5.83□□□□□ -1.48
HMGN3P1-201ENST00000453847 FMNL3Q8IVF7 1028 aa5.83□□□□□ -1.48
HMGN3P1-201ENST00000453847 SLFN12Q8IYM2 578 aa5.83□□□□□ -1.48
HMGN3P1-201ENST00000453847 JDP2Q8WYK2 163 aa5.83□□□□□ -1.48
HMGN3P1-201ENST00000453847 KIF2CQ99661 725 aa5.83□□□□□ -1.48
HMGN3P1-201ENST00000453847 HOMER2Q9NSB8 354 aa5.83□□□□□ -1.48
HMGN3P1-201ENST00000453847 CCDC163A0A0D9SF12 145 aa5.82□□□□□ -1.48
HMGN3P1-201ENST00000453847 LCE2BO14633 110 aa5.82□□□□□ -1.48
HMGN3P1-201ENST00000453847 RGS13O14921 159 aa5.82□□□□□ -1.48
HMGN3P1-201ENST00000453847 PLD2O14939 933 aa5.82□□□□□ -1.48
HMGN3P1-201ENST00000453847 CBFA2T2O43439 604 aa5.82□□□□□ -1.48
HMGN3P1-201ENST00000453847 PDE8AO60658 829 aa5.82□□□□□ -1.48
HMGN3P1-201ENST00000453847 MAP4K4O95819 1239 aaPredicted RBP5.82□□□□□ -1.48
HMGN3P1-201ENST00000453847 EPXP11678 715 aa5.82□□□□□ -1.48
HMGN3P1-201ENST00000453847 CCNFP41002 786 aa5.82□□□□□ -1.48
HMGN3P1-201ENST00000453847 GRIA2P42262 883 aa5.82□□□□□ -1.48
HMGN3P1-201ENST00000453847 MAP2K3P46734 347 aa5.82□□□□□ -1.48
HMGN3P1-201ENST00000453847 PMS1P54277 932 aaKnown RBP5.82□□□□□ -1.48
HMGN3P1-201ENST00000453847 NLRP12P59046 1061 aa5.82□□□□□ -1.48
HMGN3P1-201ENST00000453847 ERVK-24P63145 666 aa5.82□□□□□ -1.48
HMGN3P1-201ENST00000453847 FOXD4L6Q3SYB3 417 aaPredicted RBP5.82□□□□□ -1.48
HMGN3P1-201ENST00000453847 AKAP4Q5JQC9 854 aa5.82□□□□□ -1.48
HMGN3P1-201ENST00000453847 AXDND1Q5T1B0 1012 aaPredicted RBP5.82□□□□□ -1.48
HMGN3P1-201ENST00000453847 ZBTB37Q5TC79 503 aa5.82□□□□□ -1.48
HMGN3P1-201ENST00000453847 MSL1Q68DK7 614 aa5.82□□□□□ -1.48
HMGN3P1-201ENST00000453847 FOXD4L3Q6VB84 417 aaPredicted RBP5.82□□□□□ -1.48
HMGN3P1-201ENST00000453847 STRA8Q7Z7C7 330 aa5.82□□□□□ -1.48
HMGN3P1-201ENST00000453847 CHAC2Q8WUX2 184 aa5.82□□□□□ -1.48
HMGN3P1-201ENST00000453847 TMEM87BQ96K49 555 aa5.82□□□□□ -1.48
HMGN3P1-201ENST00000453847 SLC6A18Q96N87 628 aa5.82□□□□□ -1.48
HMGN3P1-201ENST00000453847 CAAP1Q9H8G2 361 aa5.82□□□□□ -1.48
HMGN3P1-201ENST00000453847 DISC1Q9NRI5 854 aa5.82□□□□□ -1.48
HMGN3P1-201ENST00000453847 MBIPQ9NS73 344 aa5.82□□□□□ -1.48
HMGN3P1-201ENST00000453847 FAM86C1Q9NVL1 165 aa5.82□□□□□ -1.48
HMGN3P1-201ENST00000453847 SUCOQ9UBS9 1254 aaKnown RBP5.82□□□□□ -1.48
HMGN3P1-201ENST00000453847 APEX2Q9UBZ4 518 aa5.82□□□□□ -1.48
HMGN3P1-201ENST00000453847 MRPS23Q9Y3D9 190 aaKnown RBP5.82□□□□□ -1.48
HMGN3P1-201ENST00000453847 IGF1RP08069 1367 aa5.81□□□□□ -1.48
HMGN3P1-201ENST00000453847 WASHC2CQ9Y4E1 1318 aa5.81□□□□□ -1.48
HMGN3P1-201ENST00000453847 IQCA1LA6NCM1 817 aa5.81□□□□□ -1.48
HMGN3P1-201ENST00000453847 TMPRSS2O15393 492 aa5.81□□□□□ -1.48
HMGN3P1-201ENST00000453847 TBX1O43435 398 aa5.81□□□□□ -1.48
HMGN3P1-201ENST00000453847 DEAF1O75398 565 aaPredicted RBP5.81□□□□□ -1.48
HMGN3P1-201ENST00000453847 EYA4O95677 639 aa5.81□□□□□ -1.48
HMGN3P1-201ENST00000453847 TP53P04637 393 aaPredicted RBP5.81□□□□□ -1.48
HMGN3P1-201ENST00000453847 ITGAVP06756 1048 aa5.81□□□□□ -1.48
HMGN3P1-201ENST00000453847 EPHX1P07099 455 aa5.81□□□□□ -1.48
HMGN3P1-201ENST00000453847 RAG1P15918 1043 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms