RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 ZFYVE28Q9HCC9 887 aa19.42■□□□□ 0.7
SCAMP4-205ENST00000452128 HTTP42858 3142 aa19.42■□□□□ 0.7
SCAMP4-205ENST00000452128 PDHXO00330 501 aa19.41■□□□□ 0.7
SCAMP4-205ENST00000452128 ASNSP08243 561 aa19.41■□□□□ 0.7
SCAMP4-205ENST00000452128 DGKZQ13574 1117 aa19.41■□□□□ 0.7
SCAMP4-205ENST00000452128 ZMYM1Q5SVZ6 1142 aa19.41■□□□□ 0.7
SCAMP4-205ENST00000452128 FASTKD5Q7L8L6 764 aaKnown RBP19.41■□□□□ 0.7
SCAMP4-205ENST00000452128 CRACR2BQ8N4Y2 399 aaPredicted RBP19.41■□□□□ 0.7
SCAMP4-205ENST00000452128 ABHD8Q96I13 439 aa19.41■□□□□ 0.7
SCAMP4-205ENST00000452128 ZBTB21Q9ULJ3 1066 aa19.41■□□□□ 0.7
SCAMP4-205ENST00000452128 SLC45A1Q9Y2W3 748 aa19.41■□□□□ 0.7
SCAMP4-205ENST00000452128 DOCK1Q14185 1865 aa19.41■□□□□ 0.7
SCAMP4-205ENST00000452128 TRIM75PA6NK02 468 aa19.4■□□□□ 0.7
SCAMP4-205ENST00000452128 USP17L12C9JPN9 530 aa19.4■□□□□ 0.7
SCAMP4-205ENST00000452128 USP17L21D6R901 530 aa19.4■□□□□ 0.7
SCAMP4-205ENST00000452128 M0R2C6 588 aa19.4■□□□□ 0.7
SCAMP4-205ENST00000452128 B4GALNT3Q6L9W6 998 aa19.4■□□□□ 0.7
SCAMP4-205ENST00000452128 GIMAP6Q6P9H5 292 aa19.4■□□□□ 0.7
SCAMP4-205ENST00000452128 CTR9Q6PD62 1173 aa19.4■□□□□ 0.7
SCAMP4-205ENST00000452128 TICAM2Q86XR7 235 aa19.4■□□□□ 0.7
SCAMP4-205ENST00000452128 MYH1P12882 1939 aa19.39■□□□□ 0.7
SCAMP4-205ENST00000452128 FOXP2O15409 715 aa19.39■□□□□ 0.69
SCAMP4-205ENST00000452128 GDF11O95390 407 aa19.39■□□□□ 0.69
SCAMP4-205ENST00000452128 GH2P01242 217 aa19.39■□□□□ 0.69
SCAMP4-205ENST00000452128 POLR3DP05423 398 aaPredicted RBP19.39■□□□□ 0.69
SCAMP4-205ENST00000452128 SP3Q02447 781 aa19.39■□□□□ 0.69
SCAMP4-205ENST00000452128 SBK1Q52WX2 424 aa19.39■□□□□ 0.69
SCAMP4-205ENST00000452128 PROCA1Q8NCQ7 364 aaPredicted RBP19.39■□□□□ 0.69
SCAMP4-205ENST00000452128 SEC62Q99442 399 aaKnown RBP19.39■□□□□ 0.69
SCAMP4-205ENST00000452128 SLC4A4Q9Y6R1 1079 aa19.39■□□□□ 0.69
SCAMP4-205ENST00000452128 CYP2D7A0A087X1C5 515 aa19.38■□□□□ 0.69
SCAMP4-205ENST00000452128 GPAA1O43292 621 aa19.38■□□□□ 0.69
SCAMP4-205ENST00000452128 BCRP11274 1271 aa19.38■□□□□ 0.69
SCAMP4-205ENST00000452128 BACE1P56817 501 aa19.38■□□□□ 0.69
SCAMP4-205ENST00000452128 TREML2Q5T2D2 321 aa19.38■□□□□ 0.69
SCAMP4-205ENST00000452128 SLC44A5Q8NCS7 719 aa19.38■□□□□ 0.69
SCAMP4-205ENST00000452128 EVI5LQ96CN4 794 aa19.38■□□□□ 0.69
SCAMP4-205ENST00000452128 DYNLL2Q96FJ2 89 aa19.38■□□□□ 0.69
SCAMP4-205ENST00000452128 EPB41L4AQ9HCS5 686 aaPredicted RBP19.38■□□□□ 0.69
SCAMP4-205ENST00000452128 AGTPBP1Q9UPW5 1226 aa19.38■□□□□ 0.69
SCAMP4-205ENST00000452128 MYH7P12883 1935 aa19.37■□□□□ 0.69
SCAMP4-205ENST00000452128 PDE4AP27815 886 aa19.37■□□□□ 0.69
SCAMP4-205ENST00000452128 PKN2Q16513 984 aaKnown RBP19.37■□□□□ 0.69
SCAMP4-205ENST00000452128 CERKLQ49MI3 558 aaPredicted RBP19.37■□□□□ 0.69
SCAMP4-205ENST00000452128 SIAH1Q8IUQ4 282 aa19.37■□□□□ 0.69
SCAMP4-205ENST00000452128 PTPRFP10586 1907 aa19.37■□□□□ 0.69
SCAMP4-205ENST00000452128 CYP2C8P10632 490 aa19.36■□□□□ 0.69
SCAMP4-205ENST00000452128 CTGFP29279 349 aa19.36■□□□□ 0.69
SCAMP4-205ENST00000452128 HMGCS2P54868 508 aa19.36■□□□□ 0.69
SCAMP4-205ENST00000452128 C16orf86Q6ZW13 317 aa19.36■□□□□ 0.69
SCAMP4-205ENST00000452128 OTOP1Q7RTM1 612 aa19.36■□□□□ 0.69
SCAMP4-205ENST00000452128 CD99L2Q8TCZ2 262 aa19.36■□□□□ 0.69
SCAMP4-205ENST00000452128 EMILIN3Q9NT22 766 aa19.36■□□□□ 0.69
SCAMP4-205ENST00000452128 ZBTB47Q9UFB7 747 aaPredicted RBP19.36■□□□□ 0.69
SCAMP4-205ENST00000452128 C19orf81C9J6K1 198 aa19.35■□□□□ 0.69
SCAMP4-205ENST00000452128 PATL2C9JE40 543 aaKnown RBP19.35■□□□□ 0.69
SCAMP4-205ENST00000452128 HOXA7P31268 230 aaPredicted RBP19.35■□□□□ 0.69
SCAMP4-205ENST00000452128 CDK8P49336 464 aa19.35■□□□□ 0.69
SCAMP4-205ENST00000452128 ABCB5Q2M3G0 1257 aa19.35■□□□□ 0.69
SCAMP4-205ENST00000452128 LRRFIP1Q32MZ4 808 aaKnown RBP19.35■□□□□ 0.69
SCAMP4-205ENST00000452128 GADL1Q6ZQY3 521 aa19.35■□□□□ 0.69
SCAMP4-205ENST00000452128 ERO1AQ96HE7 468 aa19.35■□□□□ 0.69
SCAMP4-205ENST00000452128 FSD1Q9BTV5 496 aa19.35■□□□□ 0.69
SCAMP4-205ENST00000452128 TRIM34Q9BYJ4 488 aa19.35■□□□□ 0.69
SCAMP4-205ENST00000452128 AS3MTQ9HBK9 375 aa19.35■□□□□ 0.69
SCAMP4-205ENST00000452128 SWAP70Q9UH65 585 aa19.35■□□□□ 0.69
SCAMP4-205ENST00000452128 USP17L10C9JJH3 530 aa19.34■□□□□ 0.69
SCAMP4-205ENST00000452128 GNAT2P19087 354 aa19.34■□□□□ 0.69
SCAMP4-205ENST00000452128 LACTBP83111 547 aaPredicted RBP19.34■□□□□ 0.69
SCAMP4-205ENST00000452128 MTMR2Q13614 643 aa19.34■□□□□ 0.69
SCAMP4-205ENST00000452128 POTEEQ6S8J3 1075 aa19.34■□□□□ 0.69
SCAMP4-205ENST00000452128 ACER1Q8TDN7 264 aa19.34■□□□□ 0.69
SCAMP4-205ENST00000452128 C12orf42Q96LP6 360 aa19.34■□□□□ 0.69
SCAMP4-205ENST00000452128 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.34■□□□□ 0.69
SCAMP4-205ENST00000452128 CPA4Q9UI42 421 aa19.34■□□□□ 0.69
SCAMP4-205ENST00000452128 SEPT2Q15019 361 aa19.33■□□□□ 0.68
SCAMP4-205ENST00000452128 FBXO46Q6PJ61 603 aaPredicted RBP19.33■□□□□ 0.68
SCAMP4-205ENST00000452128 IFNL3Q8IZI9 196 aa19.33■□□□□ 0.68
SCAMP4-205ENST00000452128 PARK7Q99497 189 aaKnown RBP19.33■□□□□ 0.68
SCAMP4-205ENST00000452128 ARHGAP39Q9C0H5 1083 aa19.33■□□□□ 0.68
SCAMP4-205ENST00000452128 KIAA1683Q9H0B3 1180 aa19.33■□□□□ 0.68
SCAMP4-205ENST00000452128 A0A1W2PRG0 241 aa19.32■□□□□ 0.68
SCAMP4-205ENST00000452128 CAPN15O75808 1086 aa19.32■□□□□ 0.68
SCAMP4-205ENST00000452128 ARPP21Q9UBL0 812 aaPredicted RBP19.32■□□□□ 0.68
SCAMP4-205ENST00000452128 HPS5Q9UPZ3 1129 aa19.32■□□□□ 0.68
SCAMP4-205ENST00000452128 NAV1Q8NEY1 1877 aa19.32■□□□□ 0.68
SCAMP4-205ENST00000452128 ATAD5Q96QE3 1844 aa19.32■□□□□ 0.68
SCAMP4-205ENST00000452128 ROBO3Q96MS0 1386 aa19.32■□□□□ 0.68
SCAMP4-205ENST00000452128 AKR1B1P15121 316 aa19.31■□□□□ 0.68
SCAMP4-205ENST00000452128 CCDC129Q6ZRS4 1044 aa19.31■□□□□ 0.68
SCAMP4-205ENST00000452128 CCDC17Q96LX7 622 aa19.31■□□□□ 0.68
SCAMP4-205ENST00000452128 FAM227BQ96M60 508 aa19.31■□□□□ 0.68
SCAMP4-205ENST00000452128 ASCC2Q9H1I8 757 aaPredicted RBP19.31■□□□□ 0.68
SCAMP4-205ENST00000452128 EFCC1Q9HA90 598 aa19.31■□□□□ 0.68
SCAMP4-205ENST00000452128 HELLSQ9NRZ9 838 aa19.31■□□□□ 0.68
SCAMP4-205ENST00000452128 PTPN22Q9Y2R2 807 aa19.31■□□□□ 0.68
SCAMP4-205ENST00000452128 TRIM17Q9Y577 477 aa19.31■□□□□ 0.68
SCAMP4-205ENST00000452128 BAZ2AQ9UIF9 1905 aaKnown RBP19.31■□□□□ 0.68
SCAMP4-205ENST00000452128 LOC285556D6RIA3 1793 aa19.3■□□□□ 0.68
SCAMP4-205ENST00000452128 A0A0D9SFI3 127 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms