RNA–Protein interactions for RNA: ENST00000447199.1

SPTLC1P1-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 1, humanhuman

BASIC

Gene SPTLC1P1, Length 261 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P1-201ENST00000447199 USP5P45974 858 aa19.26■□□□□ 0.67
SPTLC1P1-201ENST00000447199 MTMR2Q13614 643 aa19.26■□□□□ 0.67
SPTLC1P1-201ENST00000447199 MTFR1Q15390 333 aa19.26■□□□□ 0.67
SPTLC1P1-201ENST00000447199 FAM110CQ1W6H9 321 aa19.26■□□□□ 0.67
SPTLC1P1-201ENST00000447199 SLC4A8Q2Y0W8 1093 aa19.26■□□□□ 0.67
SPTLC1P1-201ENST00000447199 SLC9C2Q5TAH2 1124 aa19.26■□□□□ 0.67
SPTLC1P1-201ENST00000447199 ANKRD13CQ8N6S4 541 aa19.26■□□□□ 0.67
SPTLC1P1-201ENST00000447199 EDC3Q96F86 508 aaKnown RBP19.26■□□□□ 0.67
SPTLC1P1-201ENST00000447199 ASCC2Q9H1I8 757 aaPredicted RBP19.26■□□□□ 0.67
SPTLC1P1-201ENST00000447199 DDX60LQ5H9U9 1706 aaKnown RBP19.25■□□□□ 0.67
SPTLC1P1-201ENST00000447199 GOLIM4O00461 696 aa19.25■□□□□ 0.67
SPTLC1P1-201ENST00000447199 MYCP01106 439 aaPredicted RBP19.25■□□□□ 0.67
SPTLC1P1-201ENST00000447199 ATP5JP18859 108 aa19.25■□□□□ 0.67
SPTLC1P1-201ENST00000447199 PABPC4Q13310 644 aaKnown RBP eCLIP19.25■□□□□ 0.67
SPTLC1P1-201ENST00000447199 DNAJC2Q99543 621 aaKnown RBP19.25■□□□□ 0.67
SPTLC1P1-201ENST00000447199 TRIM34Q9BYJ4 488 aa19.25■□□□□ 0.67
SPTLC1P1-201ENST00000447199 SERPINB13Q9UIV8 391 aa19.25■□□□□ 0.67
SPTLC1P1-201ENST00000447199 ZNF532Q9HCE3 1301 aa19.25■□□□□ 0.67
SPTLC1P1-201ENST00000447199 MAGEB6P1A0A0J9YX57 407 aa19.24■□□□□ 0.67
SPTLC1P1-201ENST00000447199 HOXA7P31268 230 aaPredicted RBP19.24■□□□□ 0.67
SPTLC1P1-201ENST00000447199 GCLCP48506 637 aaPredicted RBP19.24■□□□□ 0.67
SPTLC1P1-201ENST00000447199 PLCD1P51178 756 aa19.24■□□□□ 0.67
SPTLC1P1-201ENST00000447199 MGAMO43451 1857 aa19.23■□□□□ 0.67
SPTLC1P1-201ENST00000447199 C19orf81C9J6K1 198 aa19.23■□□□□ 0.67
SPTLC1P1-201ENST00000447199 USP17L10C9JJH3 530 aa19.23■□□□□ 0.67
SPTLC1P1-201ENST00000447199 TNPO2O14787 897 aaKnown RBP19.23■□□□□ 0.67
SPTLC1P1-201ENST00000447199 GH2P01242 217 aa19.23■□□□□ 0.67
SPTLC1P1-201ENST00000447199 FLT3LGP49771 235 aa19.23■□□□□ 0.67
SPTLC1P1-201ENST00000447199 IRF5Q13568 498 aa19.23■□□□□ 0.67
SPTLC1P1-201ENST00000447199 SLAIN1Q8ND83 568 aa19.23■□□□□ 0.67
SPTLC1P1-201ENST00000447199 SHISA4Q96DD7 197 aa19.23■□□□□ 0.67
SPTLC1P1-201ENST00000447199 HAUS7Q99871 368 aa19.23■□□□□ 0.67
SPTLC1P1-201ENST00000447199 SLC34A2O95436 690 aa19.22■□□□□ 0.67
SPTLC1P1-201ENST00000447199 SHMT1P34896 483 aa19.22■□□□□ 0.67
SPTLC1P1-201ENST00000447199 GABPAQ06546 454 aa19.22■□□□□ 0.67
SPTLC1P1-201ENST00000447199 TTC6Q86TZ1 520 aa19.22■□□□□ 0.67
SPTLC1P1-201ENST00000447199 CRNKL1Q9BZJ0 848 aaKnown RBP19.22■□□□□ 0.67
SPTLC1P1-201ENST00000447199 BOLA2Q9H3K6 86 aa19.22■□□□□ 0.67
SPTLC1P1-201ENST00000447199 EMILIN3Q9NT22 766 aa19.22■□□□□ 0.67
SPTLC1P1-201ENST00000447199 PAG1Q9NWQ8 432 aa19.22■□□□□ 0.67
SPTLC1P1-201ENST00000447199 MORF4L1Q9UBU8 362 aa19.22■□□□□ 0.67
SPTLC1P1-201ENST00000447199 MYH1P12882 1939 aa19.21■□□□□ 0.67
SPTLC1P1-201ENST00000447199 EVX2Q03828 476 aa19.21■□□□□ 0.67
SPTLC1P1-201ENST00000447199 LCORLQ8N3X6 602 aa19.21■□□□□ 0.67
SPTLC1P1-201ENST00000447199 P2RX7Q99572 595 aaKnown RBP19.21■□□□□ 0.67
SPTLC1P1-201ENST00000447199 LRRCC1Q9C099 1032 aa19.21■□□□□ 0.67
SPTLC1P1-201ENST00000447199 TMOD4Q9NZQ9 345 aa19.21■□□□□ 0.67
SPTLC1P1-201ENST00000447199 SMARCA5O60264 1052 aaPredicted RBP19.2■□□□□ 0.66
SPTLC1P1-201ENST00000447199 ADCY3O60266 1144 aa19.2■□□□□ 0.66
SPTLC1P1-201ENST00000447199 CCL5P13501 91 aa19.2■□□□□ 0.66
SPTLC1P1-201ENST00000447199 ADD2P35612 726 aa19.2■□□□□ 0.66
SPTLC1P1-201ENST00000447199 SLFNL1Q499Z3 407 aa19.2■□□□□ 0.66
SPTLC1P1-201ENST00000447199 POTEEQ6S8J3 1075 aa19.2■□□□□ 0.66
SPTLC1P1-201ENST00000447199 PXYLP1Q8TE99 480 aa19.2■□□□□ 0.66
SPTLC1P1-201ENST00000447199 BCL11AQ9H165 835 aa19.2■□□□□ 0.66
SPTLC1P1-201ENST00000447199 DCP1AQ9NPI6 582 aaPredicted RBP19.2■□□□□ 0.66
SPTLC1P1-201ENST00000447199 GJB1P08034 283 aa19.19■□□□□ 0.66
SPTLC1P1-201ENST00000447199 ELNP15502 786 aa19.19■□□□□ 0.66
SPTLC1P1-201ENST00000447199 GUCY1A2P33402 732 aa19.19■□□□□ 0.66
SPTLC1P1-201ENST00000447199 GJA8P48165 433 aa19.19■□□□□ 0.66
SPTLC1P1-201ENST00000447199 HERVK_113P62684 666 aa19.19■□□□□ 0.66
SPTLC1P1-201ENST00000447199 CERKLQ49MI3 558 aaPredicted RBP19.19■□□□□ 0.66
SPTLC1P1-201ENST00000447199 SDR42E1Q8WUS8 393 aa19.19■□□□□ 0.66
SPTLC1P1-201ENST00000447199 C12orf42Q96LP6 360 aa19.19■□□□□ 0.66
SPTLC1P1-201ENST00000447199 TXNRD2Q9NNW7 524 aa19.19■□□□□ 0.66
SPTLC1P1-201ENST00000447199 GJD2Q9UKL4 321 aa19.19■□□□□ 0.66
SPTLC1P1-201ENST00000447199 CHGBP05060 677 aa19.18■□□□□ 0.66
SPTLC1P1-201ENST00000447199 UBXN2AP68543 259 aa19.18■□□□□ 0.66
SPTLC1P1-201ENST00000447199 IRX3P78415 501 aaPredicted RBP19.18■□□□□ 0.66
SPTLC1P1-201ENST00000447199 ABCB5Q2M3G0 1257 aa19.18■□□□□ 0.66
SPTLC1P1-201ENST00000447199 USP17L2Q6R6M4 530 aa19.18■□□□□ 0.66
SPTLC1P1-201ENST00000447199 UBE2Q1Q7Z7E8 422 aa19.18■□□□□ 0.66
SPTLC1P1-201ENST00000447199 COA7Q96BR5 231 aa19.18■□□□□ 0.66
SPTLC1P1-201ENST00000447199 DCTPP1Q9H773 170 aa19.18■□□□□ 0.66
SPTLC1P1-201ENST00000447199 ARMT1Q9H993 441 aa19.18■□□□□ 0.66
SPTLC1P1-201ENST00000447199 MCM9Q9NXL9 1143 aa19.18■□□□□ 0.66
SPTLC1P1-201ENST00000447199 RANBP2P49792 3224 aaKnown RBP19.18■□□□□ 0.66
SPTLC1P1-201ENST00000447199 PEX10O60683 326 aa19.17■□□□□ 0.66
SPTLC1P1-201ENST00000447199 INHAP05111 366 aa19.17■□□□□ 0.66
SPTLC1P1-201ENST00000447199 POLR3DP05423 398 aaPredicted RBP19.17■□□□□ 0.66
SPTLC1P1-201ENST00000447199 NKX2-3Q8TAU0 364 aa19.17■□□□□ 0.66
SPTLC1P1-201ENST00000447199 ACER1Q8TDN7 264 aa19.17■□□□□ 0.66
SPTLC1P1-201ENST00000447199 KIAA1683Q9H0B3 1180 aa19.17■□□□□ 0.66
SPTLC1P1-201ENST00000447199 RNF208Q9H0X6 261 aa19.17■□□□□ 0.66
SPTLC1P1-201ENST00000447199 UNC93B1Q9H1C4 597 aa19.17■□□□□ 0.66
SPTLC1P1-201ENST00000447199 RBPJLQ9UBG7 517 aa19.17■□□□□ 0.66
SPTLC1P1-201ENST00000447199 BIN2Q9UBW5 565 aaPredicted RBP19.17■□□□□ 0.66
SPTLC1P1-201ENST00000447199 NAV1Q8NEY1 1877 aa19.17■□□□□ 0.66
SPTLC1P1-201ENST00000447199 PRKAB2O43741 272 aa19.16■□□□□ 0.66
SPTLC1P1-201ENST00000447199 MBD4O95243 580 aa19.16■□□□□ 0.66
SPTLC1P1-201ENST00000447199 CYP2D6P10635 497 aa19.16■□□□□ 0.66
SPTLC1P1-201ENST00000447199 RAB3GAP1Q15042 981 aa19.16■□□□□ 0.66
SPTLC1P1-201ENST00000447199 UBE3CQ15386 1083 aa19.16■□□□□ 0.66
SPTLC1P1-201ENST00000447199 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.16■□□□□ 0.66
SPTLC1P1-201ENST00000447199 GPRC5AQ8NFJ5 357 aa19.15■□□□□ 0.66
SPTLC1P1-201ENST00000447199 ATP8A2Q9NTI2 1148 aa19.15■□□□□ 0.66
SPTLC1P1-201ENST00000447199 ECHDC1Q9NTX5 307 aa19.15■□□□□ 0.66
SPTLC1P1-201ENST00000447199 TAOK2Q9UL54 1235 aa19.15■□□□□ 0.66
SPTLC1P1-201ENST00000447199 DOCK3Q8IZD9 2030 aa19.15■□□□□ 0.66
SPTLC1P1-201ENST00000447199 CEP290O15078 2479 aa19.14■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms