RNA–Protein interactions for RNA: ENST00000447025.6

MCF2L2-203, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best) BASIC

Gene MCF2L2, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-203ENST00000447025 DDX20Q9UHI6 824 aaKnown RBP9.73□□□□□ -0.85
MCF2L2-203ENST00000447025 GTF3C4Q9UKN8 822 aa9.73□□□□□ -0.85
MCF2L2-203ENST00000447025 CEP131Q9UPN4 1083 aa9.73□□□□□ -0.85
MCF2L2-203ENST00000447025 CDK13Q14004 1512 aaKnown RBP9.73□□□□□ -0.85
MCF2L2-203ENST00000447025 B4DLN1 442 aa9.72□□□□□ -0.85
MCF2L2-203ENST00000447025 NEMFO60524 1076 aa9.72□□□□□ -0.85
MCF2L2-203ENST00000447025 SHROOM1Q2M3G4 852 aaPredicted RBP9.72□□□□□ -0.85
MCF2L2-203ENST00000447025 C10orf62Q5T681 223 aaPredicted RBP9.72□□□□□ -0.85
MCF2L2-203ENST00000447025 ADALQ6DHV7 355 aa9.72□□□□□ -0.85
MCF2L2-203ENST00000447025 POTEEQ6S8J3 1075 aa9.72□□□□□ -0.85
MCF2L2-203ENST00000447025 LURAP1LQ8IV03 231 aa9.72□□□□□ -0.85
MCF2L2-203ENST00000447025 CCDC50Q8IVM0 306 aa9.72□□□□□ -0.85
MCF2L2-203ENST00000447025 TBC1D31Q96DN5 1066 aa9.72□□□□□ -0.85
MCF2L2-203ENST00000447025 SNX27Q96L92 541 aa9.72□□□□□ -0.85
MCF2L2-203ENST00000447025 TCF7L2Q9NQB0 619 aa9.72□□□□□ -0.85
MCF2L2-203ENST00000447025 KMT5AQ9NQR1 393 aa9.72□□□□□ -0.85
MCF2L2-203ENST00000447025 MKL2Q9ULH7 1088 aa9.72□□□□□ -0.85
MCF2L2-203ENST00000447025 MTUS2Q5JR59 1369 aa9.72□□□□□ -0.85
MCF2L2-203ENST00000447025 RTEL1-TNFRSF6BF6WH68 1400 aa9.72□□□□□ -0.85
MCF2L2-203ENST00000447025 IQSEC2Q5JU85 1478 aa9.72□□□□□ -0.85
MCF2L2-203ENST00000447025 TEX14Q8IWB6 1497 aa9.72□□□□□ -0.85
MCF2L2-203ENST00000447025 ATXN2Q99700 1313 aaKnown RBP9.72□□□□□ -0.85
MCF2L2-203ENST00000447025 AKR1B10O60218 316 aa9.72□□□□□ -0.85
MCF2L2-203ENST00000447025 SKIP12755 728 aa9.72□□□□□ -0.85
MCF2L2-203ENST00000447025 GBP2P32456 591 aaPredicted RBP9.72□□□□□ -0.85
MCF2L2-203ENST00000447025 PEX5P50542 639 aa9.72□□□□□ -0.85
MCF2L2-203ENST00000447025 CDK17Q00537 523 aa9.72□□□□□ -0.85
MCF2L2-203ENST00000447025 LRP8Q14114 963 aa9.72□□□□□ -0.85
MCF2L2-203ENST00000447025 IRGCQ6NXR0 463 aa9.72□□□□□ -0.85
MCF2L2-203ENST00000447025 CEP57Q86XR8 500 aa9.72□□□□□ -0.85
MCF2L2-203ENST00000447025 SLC16A10Q8TF71 515 aa9.72□□□□□ -0.85
MCF2L2-203ENST00000447025 RABGGTAQ92696 567 aa9.72□□□□□ -0.85
MCF2L2-203ENST00000447025 CTAGE1Q96RT6 745 aa9.72□□□□□ -0.85
MCF2L2-203ENST00000447025 TSC22D3Q99576 134 aa9.72□□□□□ -0.85
MCF2L2-203ENST00000447025 HAUS7Q99871 368 aa9.72□□□□□ -0.85
MCF2L2-203ENST00000447025 UPF3BQ9BZI7 483 aaKnown RBP9.72□□□□□ -0.85
MCF2L2-203ENST00000447025 FAM117AQ9C073 453 aa9.72□□□□□ -0.85
MCF2L2-203ENST00000447025 EPB41L4AQ9HCS5 686 aaPredicted RBP9.72□□□□□ -0.85
MCF2L2-203ENST00000447025 LMBRD1Q9NUN5 540 aa9.72□□□□□ -0.85
MCF2L2-203ENST00000447025 HESX1Q9UBX0 185 aa9.72□□□□□ -0.85
MCF2L2-203ENST00000447025 FMN1Q68DA7 1419 aa9.71□□□□□ -0.85
MCF2L2-203ENST00000447025 TMEM247A6NEH6 219 aa9.71□□□□□ -0.85
MCF2L2-203ENST00000447025 TTC34A8MYJ7 566 aa9.71□□□□□ -0.85
MCF2L2-203ENST00000447025 C19orf81C9J6K1 198 aa9.71□□□□□ -0.85
MCF2L2-203ENST00000447025 MAP7Q14244 749 aa9.71□□□□□ -0.85
MCF2L2-203ENST00000447025 USH1GQ495M9 461 aa9.71□□□□□ -0.85
MCF2L2-203ENST00000447025 TMX3Q96JJ7 454 aa9.71□□□□□ -0.85
MCF2L2-203ENST00000447025 ABCG4Q9H172 646 aa9.71□□□□□ -0.85
MCF2L2-203ENST00000447025 AATFQ9NY61 560 aaKnown RBP eCLIP9.71□□□□□ -0.85
MCF2L2-203ENST00000447025 STK39Q9UEW8 545 aa9.71□□□□□ -0.85
MCF2L2-203ENST00000447025 CNPY2Q9Y2B0 182 aa9.71□□□□□ -0.85
MCF2L2-203ENST00000447025 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.71□□□□□ -0.85
MCF2L2-203ENST00000447025 CASKIN1Q8WXD9 1431 aa9.71□□□□□ -0.86
MCF2L2-203ENST00000447025 ANKRD36BQ8N2N9 1353 aa9.71□□□□□ -0.86
MCF2L2-203ENST00000447025 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.71□□□□□ -0.86
MCF2L2-203ENST00000447025 GNAT1P11488 350 aa9.71□□□□□ -0.86
MCF2L2-203ENST00000447025 FNTAP49354 379 aa9.71□□□□□ -0.86
MCF2L2-203ENST00000447025 LBRQ14739 615 aaKnown RBP9.71□□□□□ -0.86
MCF2L2-203ENST00000447025 CCDC38Q502W7 563 aa9.71□□□□□ -0.86
MCF2L2-203ENST00000447025 MEX3CQ5U5Q3 659 aaKnown RBP9.71□□□□□ -0.86
MCF2L2-203ENST00000447025 PDXDC1Q6P996 788 aa9.71□□□□□ -0.86
MCF2L2-203ENST00000447025 PPFIBP1Q86W92 1011 aa9.71□□□□□ -0.86
MCF2L2-203ENST00000447025 APLFQ8IW19 511 aaPredicted RBP9.71□□□□□ -0.86
MCF2L2-203ENST00000447025 VPS52Q8N1B4 723 aa9.71□□□□□ -0.86
MCF2L2-203ENST00000447025 TNIP2Q8NFZ5 429 aa9.71□□□□□ -0.86
MCF2L2-203ENST00000447025 SPACA7Q96KW9 195 aa9.71□□□□□ -0.86
MCF2L2-203ENST00000447025 NEK1Q96PY6 1258 aa9.71□□□□□ -0.86
MCF2L2-203ENST00000447025 YIPF3Q9GZM5 350 aa9.71□□□□□ -0.86
MCF2L2-203ENST00000447025 OSBPL5Q9H0X9 879 aaPredicted RBP9.71□□□□□ -0.86
MCF2L2-203ENST00000447025 GALNT8Q9NY28 637 aa9.71□□□□□ -0.86
MCF2L2-203ENST00000447025 FSBPO95073 299 aa9.7□□□□□ -0.86
MCF2L2-203ENST00000447025 ADCY5O95622 1261 aa9.7□□□□□ -0.86
MCF2L2-203ENST00000447025 AMPHP49418 695 aa9.7□□□□□ -0.86
MCF2L2-203ENST00000447025 PMS2P54278 862 aa9.7□□□□□ -0.86
MCF2L2-203ENST00000447025 TAF11Q15544 211 aa9.7□□□□□ -0.86
MCF2L2-203ENST00000447025 MAPRE1Q15691 268 aaKnown RBP9.7□□□□□ -0.86
MCF2L2-203ENST00000447025 BEND6Q5SZJ8 279 aaPredicted RBP9.7□□□□□ -0.86
MCF2L2-203ENST00000447025 CEP85LQ5SZL2 805 aa9.7□□□□□ -0.86
MCF2L2-203ENST00000447025 RAB11FIP4Q86YS3 637 aa9.7□□□□□ -0.86
MCF2L2-203ENST00000447025 CEP112Q8N8E3 955 aa9.7□□□□□ -0.86
MCF2L2-203ENST00000447025 GIPC2Q8TF65 315 aa9.7□□□□□ -0.86
MCF2L2-203ENST00000447025 ATP6V0A1Q93050 837 aa9.7□□□□□ -0.86
MCF2L2-203ENST00000447025 CEP295NLQ96MC4 621 aa9.7□□□□□ -0.86
MCF2L2-203ENST00000447025 SEMA4AQ9H3S1 761 aa9.7□□□□□ -0.86
MCF2L2-203ENST00000447025 SPC25Q9HBM1 224 aa9.7□□□□□ -0.86
MCF2L2-203ENST00000447025 DISC1Q9NRI5 854 aa9.7□□□□□ -0.86
MCF2L2-203ENST00000447025 DNAI1Q9UI46 699 aa9.7□□□□□ -0.86
MCF2L2-203ENST00000447025 IQCA1LA6NCM1 817 aa9.7□□□□□ -0.86
MCF2L2-203ENST00000447025 ABLIM1O14639 778 aa9.7□□□□□ -0.86
MCF2L2-203ENST00000447025 UBXN2AP68543 259 aa9.7□□□□□ -0.86
MCF2L2-203ENST00000447025 ATP2B2Q01814 1243 aa9.7□□□□□ -0.86
MCF2L2-203ENST00000447025 PDE3BQ13370 1112 aa9.7□□□□□ -0.86
MCF2L2-203ENST00000447025 CCDC121Q6ZUS5 278 aa9.7□□□□□ -0.86
MCF2L2-203ENST00000447025 HELQQ8TDG4 1101 aa9.7□□□□□ -0.86
MCF2L2-203ENST00000447025 C8orf76Q96K31 380 aa9.7□□□□□ -0.86
MCF2L2-203ENST00000447025 C16orf45Q96MC5 204 aaPredicted RBP9.7□□□□□ -0.86
MCF2L2-203ENST00000447025 NR1H4Q96RI1 486 aaPredicted RBP9.7□□□□□ -0.86
MCF2L2-203ENST00000447025 BICC1Q9H694 974 aaKnown RBP9.7□□□□□ -0.86
MCF2L2-203ENST00000447025 KRT82Q9NSB4 513 aa9.7□□□□□ -0.86
MCF2L2-203ENST00000447025 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms