RNA–Protein interactions for RNA: ENST00000446317.1

SF3A3P1-201, Transcript of splicing factor 3a, subunit 3 pseudogene 1, humanhuman

BASIC

Gene SF3A3P1, Length 1,477 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3P1-201ENST00000446317 ANTXR2P58335 489 aa8.94□□□□□ -0.98
SF3A3P1-201ENST00000446317 HTRA3P83110 453 aa8.94□□□□□ -0.98
SF3A3P1-201ENST00000446317 RNF20Q5VTR2 975 aa8.94□□□□□ -0.98
SF3A3P1-201ENST00000446317 GIMAP6Q6P9H5 292 aa8.94□□□□□ -0.98
SF3A3P1-201ENST00000446317 SAMD1Q6SPF0 538 aaPredicted RBP8.94□□□□□ -0.98
SF3A3P1-201ENST00000446317 C16orf86Q6ZW13 317 aa8.94□□□□□ -0.98
SF3A3P1-201ENST00000446317 CDC37L1Q7L3B6 337 aa8.94□□□□□ -0.98
SF3A3P1-201ENST00000446317 RALYLQ86SE5 291 aaKnown RBP8.94□□□□□ -0.98
SF3A3P1-201ENST00000446317 FAM83AQ86UY5 434 aa8.94□□□□□ -0.98
SF3A3P1-201ENST00000446317 CCDC144CPQ8IYA2 1237 aa8.94□□□□□ -0.98
SF3A3P1-201ENST00000446317 ZNF444Q8N0Y2 327 aaPredicted RBP8.94□□□□□ -0.98
SF3A3P1-201ENST00000446317 SPRYD3Q8NCJ5 442 aa8.94□□□□□ -0.98
SF3A3P1-201ENST00000446317 NEK1Q96PY6 1258 aa8.94□□□□□ -0.98
SF3A3P1-201ENST00000446317 MYL10Q9BUA6 226 aa8.94□□□□□ -0.98
SF3A3P1-201ENST00000446317 ELP3Q9H9T3 547 aa8.94□□□□□ -0.98
SF3A3P1-201ENST00000446317 ISY1Q9ULR0 285 aaKnown RBP8.94□□□□□ -0.98
SF3A3P1-201ENST00000446317 FOCADQ5VW36 1801 aa8.94□□□□□ -0.98
SF3A3P1-201ENST00000446317 SCN4AP35499 1836 aa8.93□□□□□ -0.98
SF3A3P1-201ENST00000446317 CD2BP2O95400 341 aaKnown RBP8.93□□□□□ -0.98
SF3A3P1-201ENST00000446317 SLC3A2P08195 630 aaKnown RBP8.93□□□□□ -0.98
SF3A3P1-201ENST00000446317 TSPY3P0CV98 308 aa8.93□□□□□ -0.98
SF3A3P1-201ENST00000446317 TSPY8P0CW00 308 aa8.93□□□□□ -0.98
SF3A3P1-201ENST00000446317 SLC4A3P48751 1232 aa8.93□□□□□ -0.98
SF3A3P1-201ENST00000446317 NEK4P51957 841 aa8.93□□□□□ -0.98
SF3A3P1-201ENST00000446317 FGD1P98174 961 aa8.93□□□□□ -0.98
SF3A3P1-201ENST00000446317 PDE4BQ07343 736 aa8.93□□□□□ -0.98
SF3A3P1-201ENST00000446317 STK3Q13188 491 aa8.93□□□□□ -0.98
SF3A3P1-201ENST00000446317 SEPT2Q15019 361 aa8.93□□□□□ -0.98
SF3A3P1-201ENST00000446317 CERKLQ49MI3 558 aaPredicted RBP8.93□□□□□ -0.98
SF3A3P1-201ENST00000446317 CERS3Q8IU89 383 aa8.93□□□□□ -0.98
SF3A3P1-201ENST00000446317 LRRC47Q8N1G4 583 aaKnown RBP8.93□□□□□ -0.98
SF3A3P1-201ENST00000446317 STAG1Q8WVM7 1258 aa8.93□□□□□ -0.98
SF3A3P1-201ENST00000446317 ZSWIM5Q9P217 1185 aa8.93□□□□□ -0.98
SF3A3P1-201ENST00000446317 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.93□□□□□ -0.98
SF3A3P1-201ENST00000446317 ATRNL1Q5VV63 1379 aa8.93□□□□□ -0.98
SF3A3P1-201ENST00000446317 PITPNM2Q9BZ72 1349 aa8.93□□□□□ -0.98
SF3A3P1-201ENST00000446317 IFIT3O14879 490 aaKnown RBP8.92□□□□□ -0.98
SF3A3P1-201ENST00000446317 USP2O75604 605 aaPredicted RBP8.92□□□□□ -0.98
SF3A3P1-201ENST00000446317 GABPAQ06546 454 aa8.92□□□□□ -0.98
SF3A3P1-201ENST00000446317 APOBRQ0VD83 1088 aa8.92□□□□□ -0.98
SF3A3P1-201ENST00000446317 TRDNQ13061 729 aa8.92□□□□□ -0.98
SF3A3P1-201ENST00000446317 ABCB5Q2M3G0 1257 aa8.92□□□□□ -0.98
SF3A3P1-201ENST00000446317 TPRNQ4KMQ1 711 aa8.92□□□□□ -0.98
SF3A3P1-201ENST00000446317 FKBP1CQ5VVH2 108 aa8.92□□□□□ -0.98
SF3A3P1-201ENST00000446317 TMED8Q6PL24 325 aaPredicted RBP8.92□□□□□ -0.98
SF3A3P1-201ENST00000446317 BLOC1S2Q6QNY1 142 aa8.92□□□□□ -0.98
SF3A3P1-201ENST00000446317 Q6ZUG5 572 aa8.92□□□□□ -0.98
SF3A3P1-201ENST00000446317 TICAM2Q86XR7 235 aa8.92□□□□□ -0.98
SF3A3P1-201ENST00000446317 MB21D2Q8IYB1 491 aaPredicted RBP8.92□□□□□ -0.98
SF3A3P1-201ENST00000446317 NCOA7Q8NI08 942 aa8.92□□□□□ -0.98
SF3A3P1-201ENST00000446317 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.92□□□□□ -0.98
SF3A3P1-201ENST00000446317 ZNF341Q9BYN7 854 aa8.92□□□□□ -0.98
SF3A3P1-201ENST00000446317 DHX36Q9H2U1 1008 aaKnown RBP8.92□□□□□ -0.98
SF3A3P1-201ENST00000446317 PDRG1Q9NUG6 133 aa8.92□□□□□ -0.98
SF3A3P1-201ENST00000446317 ANAPC4Q9UJX5 808 aa8.92□□□□□ -0.98
SF3A3P1-201ENST00000446317 LAMA4Q16363 1823 aa8.91□□□□□ -0.98
SF3A3P1-201ENST00000446317 ROBO3Q96MS0 1386 aa8.91□□□□□ -0.98
SF3A3P1-201ENST00000446317 PHF20L1A8MW92 1017 aa8.91□□□□□ -0.98
SF3A3P1-201ENST00000446317 RPS6KB1P23443 525 aa8.91□□□□□ -0.98
SF3A3P1-201ENST00000446317 GUCY1A2P33402 732 aa8.91□□□□□ -0.98
SF3A3P1-201ENST00000446317 ECE1P42892 770 aa8.91□□□□□ -0.98
SF3A3P1-201ENST00000446317 RBM25P49756 843 aaKnown RBP8.91□□□□□ -0.98
SF3A3P1-201ENST00000446317 VGLL4Q14135 290 aa8.91□□□□□ -0.98
SF3A3P1-201ENST00000446317 SUPT20HL1Q3ZLR7 823 aa8.91□□□□□ -0.98
SF3A3P1-201ENST00000446317 TMEM67Q5HYA8 995 aa8.91□□□□□ -0.98
SF3A3P1-201ENST00000446317 CST9Q5W186 159 aa8.91□□□□□ -0.98
SF3A3P1-201ENST00000446317 NFXL1Q6ZNB6 911 aa8.91□□□□□ -0.98
SF3A3P1-201ENST00000446317 PAXIP1Q6ZW49 1069 aaPredicted RBP8.91□□□□□ -0.98
SF3A3P1-201ENST00000446317 ACER1Q8TDN7 264 aa8.91□□□□□ -0.98
SF3A3P1-201ENST00000446317 ZC3H15Q8WU90 426 aaKnown RBP8.91□□□□□ -0.98
SF3A3P1-201ENST00000446317 PIBF1Q8WXW3 757 aa8.91□□□□□ -0.98
SF3A3P1-201ENST00000446317 CEP95Q96GE4 821 aa8.91□□□□□ -0.98
SF3A3P1-201ENST00000446317 IL17RBQ9NRM6 502 aa8.91□□□□□ -0.98
SF3A3P1-201ENST00000446317 CLIP2Q9UDT6 1046 aa8.91□□□□□ -0.98
SF3A3P1-201ENST00000446317 STX8Q9UNK0 236 aa8.91□□□□□ -0.98
SF3A3P1-201ENST00000446317 CYP46A1Q9Y6A2 500 aa8.91□□□□□ -0.98
SF3A3P1-201ENST00000446317 POLR2AP24928 1970 aaKnown RBP8.91□□□□□ -0.98
SF3A3P1-201ENST00000446317 TNKSO95271 1327 aa8.91□□□□□ -0.98
SF3A3P1-201ENST00000446317 ZMYM6O95789 1325 aa8.91□□□□□ -0.98
SF3A3P1-201ENST00000446317 TRIM75PA6NK02 468 aa8.9□□□□□ -0.98
SF3A3P1-201ENST00000446317 IGSF3O75054 1194 aa8.9□□□□□ -0.98
SF3A3P1-201ENST00000446317 LARGE1O95461 756 aa8.9□□□□□ -0.98
SF3A3P1-201ENST00000446317 ITGBL1O95965 494 aaPredicted RBP8.9□□□□□ -0.98
SF3A3P1-201ENST00000446317 NF2P35240 595 aa8.9□□□□□ -0.98
SF3A3P1-201ENST00000446317 MMP14P50281 582 aa8.9□□□□□ -0.98
SF3A3P1-201ENST00000446317 AK2P54819 239 aa8.9□□□□□ -0.98
SF3A3P1-201ENST00000446317 DCAF15Q66K64 600 aa8.9□□□□□ -0.98
SF3A3P1-201ENST00000446317 RUFY3Q7L099 469 aa8.9□□□□□ -0.98
SF3A3P1-201ENST00000446317 FOXP4Q8IVH2 680 aaPredicted RBP8.9□□□□□ -0.98
SF3A3P1-201ENST00000446317 SPICE1Q8N0Z3 855 aa8.9□□□□□ -0.98
SF3A3P1-201ENST00000446317 NECAB1Q8N987 351 aa8.9□□□□□ -0.98
SF3A3P1-201ENST00000446317 ESR2Q92731 530 aa8.9□□□□□ -0.98
SF3A3P1-201ENST00000446317 KCNB2Q92953 911 aa8.9□□□□□ -0.98
SF3A3P1-201ENST00000446317 BRF1Q92994 677 aa8.9□□□□□ -0.98
SF3A3P1-201ENST00000446317 OTUD5Q96G74 571 aa8.9□□□□□ -0.98
SF3A3P1-201ENST00000446317 NUP88Q99567 741 aaPredicted RBP8.9□□□□□ -0.98
SF3A3P1-201ENST00000446317 UBAC1Q9BSL1 405 aa8.9□□□□□ -0.98
SF3A3P1-201ENST00000446317 ANP32EQ9BTT0 268 aa8.9□□□□□ -0.98
SF3A3P1-201ENST00000446317 KRT23Q9C075 422 aa8.9□□□□□ -0.98
SF3A3P1-201ENST00000446317 EHD4Q9H223 541 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms