RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 PNOCQ13519 176 aa12.08□□□□□ -0.48
CALD1-210ENST00000443197 TTC38Q5R3I4 469 aa12.08□□□□□ -0.48
CALD1-210ENST00000443197 NWD1Q149M9 1564 aa12.07□□□□□ -0.48
CALD1-210ENST00000443197 OFD1O75665 1012 aa12.07□□□□□ -0.48
CALD1-210ENST00000443197 SF3B3Q15393 1217 aaKnown RBP12.07□□□□□ -0.48
CALD1-210ENST00000443197 CPVLQ9H3G5 476 aa12.07□□□□□ -0.48
CALD1-210ENST00000443197 RPAP1Q9BWH6 1393 aaPredicted RBP12.07□□□□□ -0.48
CALD1-210ENST00000443197 SEMA3EO15041 775 aa12.07□□□□□ -0.48
CALD1-210ENST00000443197 KANK3Q6NY19 840 aa12.07□□□□□ -0.48
CALD1-210ENST00000443197 DTHD1Q6ZMT9 781 aa12.07□□□□□ -0.48
CALD1-210ENST00000443197 CCDC112Q8NEF3 446 aa12.07□□□□□ -0.48
CALD1-210ENST00000443197 TEKT1Q969V4 418 aa12.07□□□□□ -0.48
CALD1-210ENST00000443197 CALML4Q96GE6 196 aa12.07□□□□□ -0.48
CALD1-210ENST00000443197 AK9Q5TCS8 1911 aa12.07□□□□□ -0.48
CALD1-210ENST00000443197 MED1Q15648 1581 aaPredicted RBP12.07□□□□□ -0.48
CALD1-210ENST00000443197 MYO1BO43795 1136 aa12.07□□□□□ -0.48
CALD1-210ENST00000443197 PLEKHA8P1O95397 391 aa12.07□□□□□ -0.48
CALD1-210ENST00000443197 SKILP12757 684 aa12.07□□□□□ -0.48
CALD1-210ENST00000443197 NOLC1Q14978 699 aaKnown RBP eCLIP12.07□□□□□ -0.48
CALD1-210ENST00000443197 RAB34Q9BZG1 259 aa12.07□□□□□ -0.48
CALD1-210ENST00000443197 KLRF2D3W0D1 207 aa12.06□□□□□ -0.48
CALD1-210ENST00000443197 ZNF827Q17R98 1081 aa12.06□□□□□ -0.48
CALD1-210ENST00000443197 PRR5LQ6MZQ0 368 aa12.06□□□□□ -0.48
CALD1-210ENST00000443197 PGBD1Q96JS3 809 aa12.06□□□□□ -0.48
CALD1-210ENST00000443197 CD209Q9NNX6 404 aa12.06□□□□□ -0.48
CALD1-210ENST00000443197 HDAC9Q9UKV0 1011 aa12.06□□□□□ -0.48
CALD1-210ENST00000443197 GPSM2P81274 684 aa12.06□□□□□ -0.48
CALD1-210ENST00000443197 PTPN14Q15678 1187 aa12.06□□□□□ -0.48
CALD1-210ENST00000443197 TXNRD3Q86VQ6 643 aa12.06□□□□□ -0.48
CALD1-210ENST00000443197 JDP2Q8WYK2 163 aa12.06□□□□□ -0.48
CALD1-210ENST00000443197 SLIT3O75094 1523 aa12.06□□□□□ -0.48
CALD1-210ENST00000443197 BMP15O95972 392 aa12.06□□□□□ -0.48
CALD1-210ENST00000443197 TNNT1P13805 278 aa12.06□□□□□ -0.48
CALD1-210ENST00000443197 GNA11P29992 359 aa12.06□□□□□ -0.48
CALD1-210ENST00000443197 EPB41L4AQ9HCS5 686 aaPredicted RBP12.06□□□□□ -0.48
CALD1-210ENST00000443197 DCP1AQ9NPI6 582 aaPredicted RBP12.06□□□□□ -0.48
CALD1-210ENST00000443197 KIF1AQ12756 1690 aa12.06□□□□□ -0.48
CALD1-210ENST00000443197 CUTAO60888 179 aa12.05□□□□□ -0.48
CALD1-210ENST00000443197 PRKCSHP14314 528 aaPredicted RBP12.05□□□□□ -0.48
CALD1-210ENST00000443197 LIFRP42702 1097 aa12.05□□□□□ -0.48
CALD1-210ENST00000443197 ANTXR2P58335 489 aa12.05□□□□□ -0.48
CALD1-210ENST00000443197 LINC00301Q8NCQ3 95 aa12.05□□□□□ -0.48
CALD1-210ENST00000443197 LY9Q9HBG7 655 aa12.05□□□□□ -0.48
CALD1-210ENST00000443197 SERTAD1Q9UHV2 236 aa12.05□□□□□ -0.48
CALD1-210ENST00000443197 RCOR1Q9UKL0 485 aa12.05□□□□□ -0.48
CALD1-210ENST00000443197 GJA3Q9Y6H8 435 aa12.05□□□□□ -0.48
CALD1-210ENST00000443197 CCNT1O60563 726 aaKnown RBP12.05□□□□□ -0.48
CALD1-210ENST00000443197 TXKP42681 527 aa12.05□□□□□ -0.48
CALD1-210ENST00000443197 ENOX2Q16206 610 aaKnown RBP12.05□□□□□ -0.48
CALD1-210ENST00000443197 TRMT44Q8IYL2 757 aaKnown RBP12.05□□□□□ -0.48
CALD1-210ENST00000443197 CUL5Q93034 780 aa12.05□□□□□ -0.48
CALD1-210ENST00000443197 N4BP3O15049 544 aa12.05□□□□□ -0.48
CALD1-210ENST00000443197 IFNAR1P17181 557 aa12.05□□□□□ -0.48
CALD1-210ENST00000443197 CDC25AP30304 524 aa12.05□□□□□ -0.48
CALD1-210ENST00000443197 SLC1A4P43007 532 aa12.05□□□□□ -0.48
CALD1-210ENST00000443197 ZNF772Q68DY9 489 aaPredicted RBP12.05□□□□□ -0.48
CALD1-210ENST00000443197 RTEL1Q9NZ71 1219 aa12.05□□□□□ -0.48
CALD1-210ENST00000443197 ASIC1P78348 528 aa12.04□□□□□ -0.48
CALD1-210ENST00000443197 IQUBQ8NA54 791 aa12.04□□□□□ -0.48
CALD1-210ENST00000443197 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.04□□□□□ -0.48
CALD1-210ENST00000443197 KIAA1468Q9P260 1216 aa12.04□□□□□ -0.48
CALD1-210ENST00000443197 BIN2Q9UBW5 565 aaPredicted RBP12.04□□□□□ -0.48
CALD1-210ENST00000443197 SCG2P13521 617 aa12.04□□□□□ -0.48
CALD1-210ENST00000443197 INF2Q27J81 1249 aa12.04□□□□□ -0.48
CALD1-210ENST00000443197 CTR9Q6PD62 1173 aa12.04□□□□□ -0.48
CALD1-210ENST00000443197 USP17L2Q6R6M4 530 aa12.04□□□□□ -0.48
CALD1-210ENST00000443197 FCHSD1Q86WN1 690 aa12.04□□□□□ -0.48
CALD1-210ENST00000443197 ENAHQ8N8S7 591 aaPredicted RBP12.04□□□□□ -0.48
CALD1-210ENST00000443197 BLZF1Q9H2G9 400 aa12.04□□□□□ -0.48
CALD1-210ENST00000443197 RFX7Q2KHR2 1363 aa12.04□□□□□ -0.48
CALD1-210ENST00000443197 SPATA31A6Q5VVP1 1343 aa12.04□□□□□ -0.48
CALD1-210ENST00000443197 UBE2Q2LH0YL09 131 aa12.04□□□□□ -0.48
CALD1-210ENST00000443197 FMNL1O95466 1100 aaPredicted RBP12.04□□□□□ -0.48
CALD1-210ENST00000443197 PPP2R5BQ15173 497 aa12.04□□□□□ -0.48
CALD1-210ENST00000443197 CLEC17AQ6ZS10 378 aa12.04□□□□□ -0.48
CALD1-210ENST00000443197 STAG1Q8WVM7 1258 aa12.04□□□□□ -0.48
CALD1-210ENST00000443197 NSUN4Q96CB9 384 aaKnown RBP12.04□□□□□ -0.48
CALD1-210ENST00000443197 TRIM47Q96LD4 638 aa12.04□□□□□ -0.48
CALD1-210ENST00000443197 FAM196BA6NMK8 535 aa12.04□□□□□ -0.48
CALD1-210ENST00000443197 TCP10L2B9ZVM9 353 aa12.04□□□□□ -0.48
CALD1-210ENST00000443197 GUCY1A2P33402 732 aa12.04□□□□□ -0.48
CALD1-210ENST00000443197 USH1GQ495M9 461 aa12.04□□□□□ -0.48
CALD1-210ENST00000443197 RC3H1Q5TC82 1133 aaKnown RBP12.04□□□□□ -0.48
CALD1-210ENST00000443197 NUP88Q99567 741 aaPredicted RBP12.04□□□□□ -0.48
CALD1-210ENST00000443197 MRVI1Q9Y6F6 885 aa12.04□□□□□ -0.48
CALD1-210ENST00000443197 CLRN2A0PK11 232 aa12.03□□□□□ -0.48
CALD1-210ENST00000443197 SMCO2A6NFE2 343 aa12.03□□□□□ -0.48
CALD1-210ENST00000443197 ERCC3P19447 782 aa12.03□□□□□ -0.48
CALD1-210ENST00000443197 SLC39A14Q15043 492 aa12.03□□□□□ -0.48
CALD1-210ENST00000443197 ZNHIT6Q9NWK9 470 aaKnown RBP12.03□□□□□ -0.48
CALD1-210ENST00000443197 TOPAZ1Q8N9V7 1692 aa12.03□□□□□ -0.48
CALD1-210ENST00000443197 CTDNEP1O95476 244 aa12.03□□□□□ -0.48
CALD1-210ENST00000443197 PTPN21Q16825 1174 aa12.03□□□□□ -0.48
CALD1-210ENST00000443197 PCDHB6Q9Y5E3 794 aa12.03□□□□□ -0.48
CALD1-210ENST00000443197 RAD17O75943 681 aa12.03□□□□□ -0.48
CALD1-210ENST00000443197 MTIF2P46199 727 aaKnown RBP12.03□□□□□ -0.48
CALD1-210ENST00000443197 PTGDRQ13258 359 aa12.03□□□□□ -0.48
CALD1-210ENST00000443197 GRAMD1CQ8IYS0 662 aa12.03□□□□□ -0.48
CALD1-210ENST00000443197 FLAD1Q8NFF5 587 aa12.03□□□□□ -0.48
CALD1-210ENST00000443197 SMARCC2Q8TAQ2 1214 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms