RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 LEO1Q8WVC0 666 aaPredicted RBP17.48■□□□□ 0.39
CPSF7-205ENST00000439958 WDR19Q8NEZ3 1342 aa17.48■□□□□ 0.39
CPSF7-205ENST00000439958 CACNA1SQ13698 1873 aa17.48■□□□□ 0.39
CPSF7-205ENST00000439958 L1TD1Q5T7N2 865 aaKnown RBP17.48■□□□□ 0.39
CPSF7-205ENST00000439958 CPVLQ9H3G5 476 aa17.48■□□□□ 0.39
CPSF7-205ENST00000439958 ANAPC4Q9UJX5 808 aa17.48■□□□□ 0.39
CPSF7-205ENST00000439958 VPS54Q9P1Q0 977 aa17.47■□□□□ 0.39
CPSF7-205ENST00000439958 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.47■□□□□ 0.39
CPSF7-205ENST00000439958 RBM26Q5T8P6 1007 aaKnown RBP17.47■□□□□ 0.39
CPSF7-205ENST00000439958 RASGRP2Q7LDG7 609 aa17.47■□□□□ 0.39
CPSF7-205ENST00000439958 CLRN2A0PK11 232 aa17.47■□□□□ 0.39
CPSF7-205ENST00000439958 MARCKSP29966 332 aaPredicted RBP17.47■□□□□ 0.39
CPSF7-205ENST00000439958 CDK8P49336 464 aa17.47■□□□□ 0.39
CPSF7-205ENST00000439958 EVCP57679 992 aa17.47■□□□□ 0.39
CPSF7-205ENST00000439958 CCDC93Q567U6 631 aa17.47■□□□□ 0.39
CPSF7-205ENST00000439958 SAMD1Q6SPF0 538 aaPredicted RBP17.47■□□□□ 0.39
CPSF7-205ENST00000439958 HOMER1Q86YM7 354 aa17.47■□□□□ 0.39
CPSF7-205ENST00000439958 ZNF396Q96N95 335 aaPredicted RBP17.47■□□□□ 0.39
CPSF7-205ENST00000439958 GRPEL1Q9HAV7 217 aa17.47■□□□□ 0.39
CPSF7-205ENST00000439958 FAM217BQ9NTX9 383 aaPredicted RBP17.47■□□□□ 0.39
CPSF7-205ENST00000439958 RHBDL3P58872 404 aa17.46■□□□□ 0.39
CPSF7-205ENST00000439958 CKAP2LQ8IYA6 745 aa17.46■□□□□ 0.39
CPSF7-205ENST00000439958 DDX4Q9NQI0 724 aaKnown RBP17.46■□□□□ 0.39
CPSF7-205ENST00000439958 PNMA1Q8ND90 353 aa17.46■□□□□ 0.39
CPSF7-205ENST00000439958 TDRD3Q9H7E2 651 aaKnown RBP17.46■□□□□ 0.39
CPSF7-205ENST00000439958 VEZTQ9HBM0 779 aa17.46■□□□□ 0.39
CPSF7-205ENST00000439958 ZNF287Q9HBT7 754 aa17.46■□□□□ 0.39
CPSF7-205ENST00000439958 MYH2Q9UKX2 1941 aa17.46■□□□□ 0.39
CPSF7-205ENST00000439958 PPP4CP60510 307 aa17.46■□□□□ 0.38
CPSF7-205ENST00000439958 FAM205AQ6ZU69 1335 aa17.45■□□□□ 0.38
CPSF7-205ENST00000439958 KIF28PB7ZC32 967 aa17.45■□□□□ 0.38
CPSF7-205ENST00000439958 LIG1P18858 919 aa17.45■□□□□ 0.38
CPSF7-205ENST00000439958 CDC42EP5Q6NZY7 148 aa17.45■□□□□ 0.38
CPSF7-205ENST00000439958 PDIA4P13667 645 aaKnown RBP17.45■□□□□ 0.38
CPSF7-205ENST00000439958 SEC23AQ15436 765 aa17.45■□□□□ 0.38
CPSF7-205ENST00000439958 ANP32BQ92688 251 aaKnown RBP17.45■□□□□ 0.38
CPSF7-205ENST00000439958 DACT1Q9NYF0 836 aa17.45■□□□□ 0.38
CPSF7-205ENST00000439958 BTBD18B2RXH4 712 aa17.44■□□□□ 0.38
CPSF7-205ENST00000439958 XRCC6P12956 609 aaKnown RBP eCLIP17.44■□□□□ 0.38
CPSF7-205ENST00000439958 LRRC47Q8N1G4 583 aaKnown RBP17.44■□□□□ 0.38
CPSF7-205ENST00000439958 FBXL16Q8N461 479 aa17.44■□□□□ 0.38
CPSF7-205ENST00000439958 SBK1Q52WX2 424 aa17.44■□□□□ 0.38
CPSF7-205ENST00000439958 ZFPM1Q8IX07 1006 aa17.44■□□□□ 0.38
CPSF7-205ENST00000439958 OGFOD1Q8N543 542 aa17.44■□□□□ 0.38
CPSF7-205ENST00000439958 PIM2Q9P1W9 311 aa17.44■□□□□ 0.38
CPSF7-205ENST00000439958 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.44■□□□□ 0.38
CPSF7-205ENST00000439958 CLIC4Q9Y696 253 aa17.44■□□□□ 0.38
CPSF7-205ENST00000439958 DOCK2Q92608 1830 aa17.44■□□□□ 0.38
CPSF7-205ENST00000439958 ANKRD31Q8N7Z5 1873 aa17.44■□□□□ 0.38
CPSF7-205ENST00000439958 TCP10L2B9ZVM9 353 aa17.43■□□□□ 0.38
CPSF7-205ENST00000439958 HLA-DOAP06340 250 aa17.43■□□□□ 0.38
CPSF7-205ENST00000439958 NR5A1Q13285 461 aa17.43■□□□□ 0.38
CPSF7-205ENST00000439958 DIS3L2Q8IYB7 885 aaKnown RBP17.43■□□□□ 0.38
CPSF7-205ENST00000439958 ORC4O43929 436 aa17.43■□□□□ 0.38
CPSF7-205ENST00000439958 IFNAR1P17181 557 aa17.43■□□□□ 0.38
CPSF7-205ENST00000439958 NTRK3Q16288 839 aa17.43■□□□□ 0.38
CPSF7-205ENST00000439958 WASF1Q92558 559 aa17.43■□□□□ 0.38
CPSF7-205ENST00000439958 KIAA2012Q0VF49 1180 aa17.43■□□□□ 0.38
CPSF7-205ENST00000439958 STRIP1Q5VSL9 837 aa17.43■□□□□ 0.38
CPSF7-205ENST00000439958 SLX4Q8IY92 1834 aa17.42■□□□□ 0.38
CPSF7-205ENST00000439958 RASA1P20936 1047 aa17.42■□□□□ 0.38
CPSF7-205ENST00000439958 SUPT20HQ8NEM7 779 aa17.42■□□□□ 0.38
CPSF7-205ENST00000439958 IL17RBQ9NRM6 502 aa17.42■□□□□ 0.38
CPSF7-205ENST00000439958 A0A1B0GUL6 1792 aa17.42■□□□□ 0.38
CPSF7-205ENST00000439958 FMNL1O95466 1100 aaPredicted RBP17.42■□□□□ 0.38
CPSF7-205ENST00000439958 XBP1P17861 261 aa17.42■□□□□ 0.38
CPSF7-205ENST00000439958 KIF23Q02241 960 aaPredicted RBP17.42■□□□□ 0.38
CPSF7-205ENST00000439958 NIM1KQ8IY84 436 aa17.42■□□□□ 0.38
CPSF7-205ENST00000439958 STAG2Q8N3U4 1231 aa17.42■□□□□ 0.38
CPSF7-205ENST00000439958 GPKOWQ92917 476 aaPredicted RBP eCLIP17.42■□□□□ 0.383e-7■■■■□ 21.6
CPSF7-205ENST00000439958 SERPINB13Q9UIV8 391 aa17.42■□□□□ 0.38
CPSF7-205ENST00000439958 WDHD1O75717 1129 aaPredicted RBP17.42■□□□□ 0.38
CPSF7-205ENST00000439958 DEXIO95424 95 aa17.42■□□□□ 0.38
CPSF7-205ENST00000439958 CFAP100Q494V2 611 aa17.42■□□□□ 0.38
CPSF7-205ENST00000439958 DALRD3Q5D0E6 543 aaKnown RBP17.42■□□□□ 0.38
CPSF7-205ENST00000439958 DACT2Q5SW24 774 aa17.42■□□□□ 0.38
CPSF7-205ENST00000439958 MYSM1Q5VVJ2 828 aa17.42■□□□□ 0.38
CPSF7-205ENST00000439958 CCDC73Q6ZRK6 1079 aa17.42■□□□□ 0.38
CPSF7-205ENST00000439958 CEP95Q96GE4 821 aa17.42■□□□□ 0.38
CPSF7-205ENST00000439958 PCP11498 1178 aaKnown RBP17.41■□□□□ 0.38
CPSF7-205ENST00000439958 NASPP49321 788 aaPredicted RBP17.41■□□□□ 0.38
CPSF7-205ENST00000439958 MRE11P49959 708 aa17.41■□□□□ 0.38
CPSF7-205ENST00000439958 TROAPQ12815 778 aa17.41■□□□□ 0.38
CPSF7-205ENST00000439958 CCDC183Q5T5S1 534 aa17.41■□□□□ 0.38
CPSF7-205ENST00000439958 APOBEC3HQ6NTF7 200 aaKnown RBP17.41■□□□□ 0.38
CPSF7-205ENST00000439958 JDP2Q8WYK2 163 aa17.41■□□□□ 0.38
CPSF7-205ENST00000439958 TNS1Q9HBL0 1735 aaKnown RBP17.41■□□□□ 0.38
CPSF7-205ENST00000439958 FRMPD2Q68DX3 1309 aaPredicted RBP17.41■□□□□ 0.38
CPSF7-205ENST00000439958 YDJCA8MPS7 323 aa17.41■□□□□ 0.38
CPSF7-205ENST00000439958 USP17L2Q6R6M4 530 aa17.41■□□□□ 0.38
CPSF7-205ENST00000439958 CCAR1Q8IX12 1150 aaKnown RBP17.41■□□□□ 0.38
CPSF7-205ENST00000439958 ERCC4Q92889 916 aaPredicted RBP17.41■□□□□ 0.38
CPSF7-205ENST00000439958 RTN4Q9NQC3 1192 aaKnown RBP17.41■□□□□ 0.38
CPSF7-205ENST00000439958 MKRN1Q9UHC7 482 aaKnown RBP17.41■□□□□ 0.38
CPSF7-205ENST00000439958 GJA3Q9Y6H8 435 aa17.41■□□□□ 0.38
CPSF7-205ENST00000439958 KIF5BP33176 963 aa17.41■□□□□ 0.38
CPSF7-205ENST00000439958 RTKN2Q8IZC4 609 aa17.41■□□□□ 0.38
CPSF7-205ENST00000439958 SLC16A10Q8TF71 515 aa17.41■□□□□ 0.38
CPSF7-205ENST00000439958 TNMDQ9H2S6 317 aa17.41■□□□□ 0.38
CPSF7-205ENST00000439958 CHD4Q14839 1912 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms