RNA–Protein interactions for RNA: ENST00000432645.6

HDAC9-212, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-212ENST00000432645 FMNL1O95466 1100 aaPredicted RBP9.63□□□□□ -0.87
HDAC9-212ENST00000432645 IFNAR1P17181 557 aa9.63□□□□□ -0.87
HDAC9-212ENST00000432645 MSNP26038 577 aaKnown RBP9.63□□□□□ -0.87
HDAC9-212ENST00000432645 SEC23AQ15436 765 aa9.63□□□□□ -0.87
HDAC9-212ENST00000432645 CCDC73Q6ZRK6 1079 aa9.63□□□□□ -0.87
HDAC9-212ENST00000432645 BRAPQ7Z569 592 aa9.63□□□□□ -0.87
HDAC9-212ENST00000432645 TMTC2Q8N394 836 aa9.63□□□□□ -0.87
HDAC9-212ENST00000432645 PDS5AQ29RF7 1337 aaKnown RBP9.63□□□□□ -0.87
HDAC9-212ENST00000432645 BRWD3Q6RI45 1802 aa9.63□□□□□ -0.87
HDAC9-212ENST00000432645 RBM6P78332 1123 aaKnown RBP9.62□□□□□ -0.87
HDAC9-212ENST00000432645 ATL3Q6DD88 541 aa9.62□□□□□ -0.87
HDAC9-212ENST00000432645 TRIM22Q8IYM9 498 aa9.62□□□□□ -0.87
HDAC9-212ENST00000432645 TGFBRAP1Q8WUH2 860 aa9.62□□□□□ -0.87
HDAC9-212ENST00000432645 FBXW7Q969H0 707 aa9.62□□□□□ -0.87
HDAC9-212ENST00000432645 DYNLL2Q96FJ2 89 aa9.62□□□□□ -0.87
HDAC9-212ENST00000432645 ATP8A2Q9NTI2 1148 aa9.62□□□□□ -0.87
HDAC9-212ENST00000432645 UBR3Q6ZT12 1888 aa9.62□□□□□ -0.87
HDAC9-212ENST00000432645 MYH13Q9UKX3 1938 aa9.62□□□□□ -0.87
HDAC9-212ENST00000432645 BTBD18B2RXH4 712 aa9.62□□□□□ -0.87
HDAC9-212ENST00000432645 SPTLC2O15270 562 aa9.62□□□□□ -0.87
HDAC9-212ENST00000432645 BBOX1O75936 387 aa9.62□□□□□ -0.87
HDAC9-212ENST00000432645 SNW1Q13573 536 aaKnown RBP9.62□□□□□ -0.87
HDAC9-212ENST00000432645 ANO6Q4KMQ2 910 aa9.62□□□□□ -0.87
HDAC9-212ENST00000432645 ANO1Q5XXA6 986 aa9.62□□□□□ -0.87
HDAC9-212ENST00000432645 LUZP1Q86V48 1076 aa9.62□□□□□ -0.87
HDAC9-212ENST00000432645 CRACR2BQ8N4Y2 399 aaPredicted RBP9.62□□□□□ -0.87
HDAC9-212ENST00000432645 TBC1D16Q8TBP0 767 aa9.62□□□□□ -0.87
HDAC9-212ENST00000432645 PIBF1Q8WXW3 757 aa9.62□□□□□ -0.87
HDAC9-212ENST00000432645 SAP30BPQ9UHR5 308 aaKnown RBP9.62□□□□□ -0.87
HDAC9-212ENST00000432645 MRVI1Q9Y6F6 885 aa9.62□□□□□ -0.87
HDAC9-212ENST00000432645 TSPY2A6NKD2 308 aa9.62□□□□□ -0.87
HDAC9-212ENST00000432645 ATP2B4P23634 1241 aa9.62□□□□□ -0.87
HDAC9-212ENST00000432645 SASS6Q6UVJ0 657 aa9.62□□□□□ -0.87
HDAC9-212ENST00000432645 POLR3EQ9NVU0 708 aa9.62□□□□□ -0.87
HDAC9-212ENST00000432645 FAM13BQ9NYF5 915 aa9.62□□□□□ -0.87
HDAC9-212ENST00000432645 TIAM2Q8IVF5 1701 aa9.61□□□□□ -0.87
HDAC9-212ENST00000432645 KINO60870 393 aaKnown RBP9.61□□□□□ -0.87
HDAC9-212ENST00000432645 PLEKHA8P1O95397 391 aa9.61□□□□□ -0.87
HDAC9-212ENST00000432645 NDUFA8P51970 172 aa9.61□□□□□ -0.87
HDAC9-212ENST00000432645 IRX5P78411 483 aaPredicted RBP9.61□□□□□ -0.87
HDAC9-212ENST00000432645 MFSD14BQ5SR56 506 aa9.61□□□□□ -0.87
HDAC9-212ENST00000432645 ADALQ6DHV7 355 aa9.61□□□□□ -0.87
HDAC9-212ENST00000432645 CATIPQ7Z7H3 387 aa9.61□□□□□ -0.87
HDAC9-212ENST00000432645 NBPF11Q86T75 865 aa9.61□□□□□ -0.87
HDAC9-212ENST00000432645 MAPKAPK5Q8IW41 473 aa9.61□□□□□ -0.87
HDAC9-212ENST00000432645 ARPP21Q9UBL0 812 aaPredicted RBP9.61□□□□□ -0.87
HDAC9-212ENST00000432645 MTMR7Q9Y216 660 aa9.61□□□□□ -0.87
HDAC9-212ENST00000432645 CCDC196A0A1B0GTZ2 297 aa9.61□□□□□ -0.87
HDAC9-212ENST00000432645 F8W031 263 aaPredicted RBP9.61□□□□□ -0.87
HDAC9-212ENST00000432645 ADCY5O95622 1261 aa9.61□□□□□ -0.87
HDAC9-212ENST00000432645 MMP10P09238 476 aa9.61□□□□□ -0.87
HDAC9-212ENST00000432645 ATP2B1P20020 1258 aa9.61□□□□□ -0.87
HDAC9-212ENST00000432645 FAM160A1Q05DH4 1040 aa9.61□□□□□ -0.87
HDAC9-212ENST00000432645 SLC44A5Q8NCS7 719 aa9.61□□□□□ -0.87
HDAC9-212ENST00000432645 KCNG4Q8TDN1 519 aa9.61□□□□□ -0.87
HDAC9-212ENST00000432645 DNAJC25Q9H1X3 360 aa9.61□□□□□ -0.87
HDAC9-212ENST00000432645 CHD4Q14839 1912 aa9.61□□□□□ -0.87
HDAC9-212ENST00000432645 PPEF1O14829 653 aaPredicted RBP9.6□□□□□ -0.87
HDAC9-212ENST00000432645 IRF6O14896 467 aa9.6□□□□□ -0.87
HDAC9-212ENST00000432645 AP5Z1O43299 807 aa9.6□□□□□ -0.87
HDAC9-212ENST00000432645 WDHD1O75717 1129 aaPredicted RBP9.6□□□□□ -0.87
HDAC9-212ENST00000432645 BAG3O95817 575 aa9.6□□□□□ -0.87
HDAC9-212ENST00000432645 SLC3A2P08195 630 aaKnown RBP9.6□□□□□ -0.87
HDAC9-212ENST00000432645 HOXA10P31260 410 aaPredicted RBP9.6□□□□□ -0.87
HDAC9-212ENST00000432645 PDE4BQ07343 736 aa9.6□□□□□ -0.87
HDAC9-212ENST00000432645 NR5A1Q13285 461 aa9.6□□□□□ -0.87
HDAC9-212ENST00000432645 DIS3L2Q8IYB7 885 aaKnown RBP9.6□□□□□ -0.87
HDAC9-212ENST00000432645 ENGASEQ8NFI3 743 aa9.6□□□□□ -0.87
HDAC9-212ENST00000432645 MRPS27Q92552 414 aaKnown RBP9.6□□□□□ -0.87
HDAC9-212ENST00000432645 NOL10Q9BSC4 688 aaKnown RBP9.6□□□□□ -0.87
HDAC9-212ENST00000432645 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.6□□□□□ -0.87
HDAC9-212ENST00000432645 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.6□□□□□ -0.87
HDAC9-212ENST00000432645 V9GY48 417 aaPredicted RBP9.6□□□□□ -0.87
HDAC9-212ENST00000432645 OFD1O75665 1012 aa9.6□□□□□ -0.87
HDAC9-212ENST00000432645 YEATS4O95619 227 aa9.6□□□□□ -0.87
HDAC9-212ENST00000432645 FGRP09769 529 aa9.6□□□□□ -0.87
HDAC9-212ENST00000432645 BTDP43251 543 aa9.6□□□□□ -0.87
HDAC9-212ENST00000432645 PLCD1P51178 756 aa9.6□□□□□ -0.87
HDAC9-212ENST00000432645 GTF2IP78347 998 aa9.6□□□□□ -0.87
HDAC9-212ENST00000432645 AKAP17AQ02040 695 aaKnown RBP9.6□□□□□ -0.87
HDAC9-212ENST00000432645 TROAPQ12815 778 aa9.6□□□□□ -0.87
HDAC9-212ENST00000432645 UVSSAQ2YD98 709 aa9.6□□□□□ -0.87
HDAC9-212ENST00000432645 ZNF772Q68DY9 489 aaPredicted RBP9.6□□□□□ -0.87
HDAC9-212ENST00000432645 NLGN1Q8N2Q7 840 aa9.6□□□□□ -0.87
HDAC9-212ENST00000432645 OXER1Q8TDS5 423 aa9.6□□□□□ -0.87
HDAC9-212ENST00000432645 ZNF526Q8TF50 670 aaPredicted RBP9.6□□□□□ -0.87
HDAC9-212ENST00000432645 WASF1Q92558 559 aa9.6□□□□□ -0.87
HDAC9-212ENST00000432645 SDF4Q9BRK5 362 aa9.6□□□□□ -0.87
HDAC9-212ENST00000432645 VPS54Q9P1Q0 977 aa9.6□□□□□ -0.87
HDAC9-212ENST00000432645 DEXIO95424 95 aa9.59□□□□□ -0.87
HDAC9-212ENST00000432645 MMP1P03956 469 aa9.59□□□□□ -0.87
HDAC9-212ENST00000432645 U2AF2P26368 475 aaKnown RBP eCLIP9.59□□□□□ -0.87
HDAC9-212ENST00000432645 GSTO1P78417 241 aa9.59□□□□□ -0.87
HDAC9-212ENST00000432645 TFAP4Q01664 338 aa9.59□□□□□ -0.87
HDAC9-212ENST00000432645 AKT1S1Q96B36 256 aa9.59□□□□□ -0.87
HDAC9-212ENST00000432645 CRAMP1Q96RY5 1269 aa9.59□□□□□ -0.87
HDAC9-212ENST00000432645 MTA3Q9BTC8 594 aa9.59□□□□□ -0.87
HDAC9-212ENST00000432645 MKNK2Q9HBH9 465 aa9.59□□□□□ -0.87
HDAC9-212ENST00000432645 DUOX1Q9NRD9 1551 aa9.59□□□□□ -0.87
HDAC9-212ENST00000432645 STK36Q9NRP7 1315 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms