RNA–Protein interactions for RNA: ENST00000431918.1

CLDN4-202, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,108 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-202ENST00000431918 CALM2P0DP24 149 aa13.03□□□□□ -0.32
CLDN4-202ENST00000431918 CALM3P0DP25 149 aa13.03□□□□□ -0.32
CLDN4-202ENST00000431918 UTP14CQ5TAP6 766 aaKnown RBP13.03□□□□□ -0.32
CLDN4-202ENST00000431918 FMR1NBQ8N0W7 255 aaPredicted RBP13.03□□□□□ -0.32
CLDN4-202ENST00000431918 OXER1Q8TDS5 423 aa13.03□□□□□ -0.32
CLDN4-202ENST00000431918 CACTINQ8WUQ7 758 aaKnown RBP13.03□□□□□ -0.32
CLDN4-202ENST00000431918 STAG1Q8WVM7 1258 aa13.03□□□□□ -0.32
CLDN4-202ENST00000431918 ZNF512BQ96KM6 892 aaPredicted RBP13.03□□□□□ -0.32
CLDN4-202ENST00000431918 ADGRA1Q86SQ6 560 aa13.03□□□□□ -0.32
CLDN4-202ENST00000431918 CRACR2BQ8N4Y2 399 aaPredicted RBP13.03□□□□□ -0.32
CLDN4-202ENST00000431918 GTPBP4Q9BZE4 634 aaKnown RBP13.03□□□□□ -0.32
CLDN4-202ENST00000431918 SEC63Q9UGP8 760 aaKnown RBP13.03□□□□□ -0.32
CLDN4-202ENST00000431918 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.03□□□□□ -0.32
CLDN4-202ENST00000431918 V9GYY5 206 aaPredicted RBP13.03□□□□□ -0.32
CLDN4-202ENST00000431918 PHRF1Q9P1Y6 1649 aaKnown RBP13.02□□□□□ -0.32
CLDN4-202ENST00000431918 FOXP2O15409 715 aa13.02□□□□□ -0.32
CLDN4-202ENST00000431918 GSTO1P78417 241 aa13.02□□□□□ -0.32
CLDN4-202ENST00000431918 MYL5Q02045 173 aa13.02□□□□□ -0.32
CLDN4-202ENST00000431918 FILIP1LQ4L180 1135 aa13.02□□□□□ -0.32
CLDN4-202ENST00000431918 GPKOWQ92917 476 aaPredicted RBP eCLIP13.02□□□□□ -0.32
CLDN4-202ENST00000431918 ZNF287Q9HBT7 754 aa13.02□□□□□ -0.32
CLDN4-202ENST00000431918 PCDHA5Q9Y5H7 936 aa13.02□□□□□ -0.32
CLDN4-202ENST00000431918 GOLGA8HP0CJ92 632 aa13.02□□□□□ -0.33
CLDN4-202ENST00000431918 GSDMDP57764 484 aa13.02□□□□□ -0.33
CLDN4-202ENST00000431918 FANCCQ00597 558 aa13.02□□□□□ -0.33
CLDN4-202ENST00000431918 ALX1Q15699 326 aa13.02□□□□□ -0.33
CLDN4-202ENST00000431918 TAF3Q5VWG9 929 aa13.02□□□□□ -0.33
CLDN4-202ENST00000431918 WDR66Q8TBY9 1149 aa13.02□□□□□ -0.33
CLDN4-202ENST00000431918 MMP1P03956 469 aa13.02□□□□□ -0.33
CLDN4-202ENST00000431918 PPFIBP1Q86W92 1011 aa13.02□□□□□ -0.33
CLDN4-202ENST00000431918 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.02□□□□□ -0.33
CLDN4-202ENST00000431918 TNS2Q63HR2 1409 aa13.01□□□□□ -0.33
CLDN4-202ENST00000431918 TNNT3P45378 269 aaPredicted RBP13.01□□□□□ -0.33
CLDN4-202ENST00000431918 CEP135Q66GS9 1140 aa13.01□□□□□ -0.33
CLDN4-202ENST00000431918 ENAHQ8N8S7 591 aaPredicted RBP13.01□□□□□ -0.33
CLDN4-202ENST00000431918 NBPF3Q9H094 633 aa13.01□□□□□ -0.33
CLDN4-202ENST00000431918 RBM28Q9NW13 759 aaKnown RBP13.01□□□□□ -0.33
CLDN4-202ENST00000431918 GGA1Q9UJY5 639 aa13.01□□□□□ -0.33
CLDN4-202ENST00000431918 MAPK8IP1Q9UQF2 711 aa13.01□□□□□ -0.33
CLDN4-202ENST00000431918 KCPQ6ZWJ8 1503 aa13.01□□□□□ -0.33
CLDN4-202ENST00000431918 TCRBV5S4A2TA0A5A2 114 aa13.01□□□□□ -0.33
CLDN4-202ENST00000431918 CCDC96Q2M329 555 aa13.01□□□□□ -0.33
CLDN4-202ENST00000431918 LONRF3Q496Y0 759 aa13.01□□□□□ -0.33
CLDN4-202ENST00000431918 CCDC47Q96A33 483 aaKnown RBP13.01□□□□□ -0.33
CLDN4-202ENST00000431918 UBA7P41226 1012 aa13.01□□□□□ -0.33
CLDN4-202ENST00000431918 TTC38Q5R3I4 469 aa13.01□□□□□ -0.33
CLDN4-202ENST00000431918 MFSD14BQ5SR56 506 aa13.01□□□□□ -0.33
CLDN4-202ENST00000431918 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.01□□□□□ -0.33
CLDN4-202ENST00000431918 ILDR1Q86SU0 546 aaPredicted RBP13.01□□□□□ -0.33
CLDN4-202ENST00000431918 PRIMPOLQ96LW4 560 aa13.01□□□□□ -0.33
CLDN4-202ENST00000431918 TRIM37O94972 964 aa13□□□□□ -0.33
CLDN4-202ENST00000431918 SSBP05455 408 aaKnown RBP eCLIP13□□□□□ -0.33
CLDN4-202ENST00000431918 SNW1Q13573 536 aaKnown RBP13□□□□□ -0.33
CLDN4-202ENST00000431918 SGMS1Q86VZ5 419 aa13□□□□□ -0.33
CLDN4-202ENST00000431918 MNS1Q8NEH6 495 aa13□□□□□ -0.33
CLDN4-202ENST00000431918 RASGRP4Q8TDF6 673 aa13□□□□□ -0.33
CLDN4-202ENST00000431918 ZC3H12CQ9C0D7 883 aaKnown RBP13□□□□□ -0.33
CLDN4-202ENST00000431918 NEMFO60524 1076 aa13□□□□□ -0.33
CLDN4-202ENST00000431918 NAPAP54920 295 aa13□□□□□ -0.33
CLDN4-202ENST00000431918 GTF2IP78347 998 aa13□□□□□ -0.33
CLDN4-202ENST00000431918 POSTNQ15063 836 aa13□□□□□ -0.33
CLDN4-202ENST00000431918 TSR1Q2NL82 804 aaKnown RBP13□□□□□ -0.33
CLDN4-202ENST00000431918 SLC44A5Q8NCS7 719 aa13□□□□□ -0.33
CLDN4-202ENST00000431918 NKX2-3Q8TAU0 364 aa13□□□□□ -0.33
CLDN4-202ENST00000431918 KIAA1524Q8TCG1 905 aa13□□□□□ -0.33
CLDN4-202ENST00000431918 CDK5RAP3Q96JB5 506 aa13□□□□□ -0.33
CLDN4-202ENST00000431918 FAM205CA6NFA0 338 aa13□□□□□ -0.33
CLDN4-202ENST00000431918 TERF1P54274 439 aa13□□□□□ -0.33
CLDN4-202ENST00000431918 KRBA2Q6ZNG9 492 aa13□□□□□ -0.33
CLDN4-202ENST00000431918 SPDYE4A6NLX3 237 aa12.99□□□□□ -0.33
CLDN4-202ENST00000431918 RIOK3O14730 519 aaKnown RBP12.99□□□□□ -0.33
CLDN4-202ENST00000431918 COBLO75128 1261 aa12.99□□□□□ -0.33
CLDN4-202ENST00000431918 ATP1A3P13637 1013 aa12.99□□□□□ -0.33
CLDN4-202ENST00000431918 SF3B3Q15393 1217 aaKnown RBP12.99□□□□□ -0.33
CLDN4-202ENST00000431918 CCDC144BQ3MJ40 725 aa12.99□□□□□ -0.33
CLDN4-202ENST00000431918 TXNRD3Q86VQ6 643 aa12.99□□□□□ -0.33
CLDN4-202ENST00000431918 PNMA1Q8ND90 353 aa12.99□□□□□ -0.33
CLDN4-202ENST00000431918 CSRNP2Q9H175 543 aa12.99□□□□□ -0.33
CLDN4-202ENST00000431918 NFE2L3Q9Y4A8 694 aa12.99□□□□□ -0.33
CLDN4-202ENST00000431918 PLEKHG2Q9H7P9 1386 aa12.99□□□□□ -0.33
CLDN4-202ENST00000431918 RRAGBQ5VZM2 374 aa12.99□□□□□ -0.33
CLDN4-202ENST00000431918 CTR9Q6PD62 1173 aa12.99□□□□□ -0.33
CLDN4-202ENST00000431918 KIF18AQ8NI77 898 aa12.99□□□□□ -0.33
CLDN4-202ENST00000431918 FANCLQ9NW38 375 aa12.99□□□□□ -0.33
CLDN4-202ENST00000431918 ARPP21Q9UBL0 812 aaPredicted RBP12.99□□□□□ -0.33
CLDN4-202ENST00000431918 JCADQ9P266 1359 aa12.99□□□□□ -0.33
CLDN4-202ENST00000431918 WDR19Q8NEZ3 1342 aa12.99□□□□□ -0.33
CLDN4-202ENST00000431918 USP17L3A6NCW0 530 aa12.99□□□□□ -0.33
CLDN4-202ENST00000431918 USP17L4A6NCW7 530 aa12.99□□□□□ -0.33
CLDN4-202ENST00000431918 FOXN1O15353 648 aa12.99□□□□□ -0.33
CLDN4-202ENST00000431918 CDC25AP30304 524 aa12.99□□□□□ -0.33
CLDN4-202ENST00000431918 KANK3Q6NY19 840 aa12.99□□□□□ -0.33
CLDN4-202ENST00000431918 USP17L1Q7RTZ2 530 aa12.99□□□□□ -0.33
CLDN4-202ENST00000431918 SEPT12Q8IYM1 358 aa12.99□□□□□ -0.33
CLDN4-202ENST00000431918 BLZF1Q9H2G9 400 aa12.99□□□□□ -0.33
CLDN4-202ENST00000431918 DCP1AQ9NPI6 582 aaPredicted RBP12.99□□□□□ -0.33
CLDN4-202ENST00000431918 ARFGEF2Q9Y6D5 1785 aa12.99□□□□□ -0.33
CLDN4-202ENST00000431918 PNPLA7Q6ZV29 1317 aa12.99□□□□□ -0.33
CLDN4-202ENST00000431918 GOLGA8FQ08AF8 430 aa12.98□□□□□ -0.33
CLDN4-202ENST00000431918 GOLGA8DPQ0D2H9 430 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms