RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 ANO1Q5XXA6 986 aa14.86□□□□□ -0.03
DDX56-204ENST00000431640 KRT40Q6A162 431 aa14.86□□□□□ -0.03
DDX56-204ENST00000431640 CC2D2BQ6DHV5 1058 aa14.86□□□□□ -0.03
DDX56-204ENST00000431640 OTUD7BQ6GQQ9 843 aa14.86□□□□□ -0.03
DDX56-204ENST00000431640 CKAP2LQ8IYA6 745 aa14.86□□□□□ -0.03
DDX56-204ENST00000431640 JMYQ8N9B5 988 aa14.86□□□□□ -0.03
DDX56-204ENST00000431640 ENGASEQ8NFI3 743 aa14.86□□□□□ -0.03
DDX56-204ENST00000431640 NKX2-3Q8TAU0 364 aa14.86□□□□□ -0.03
DDX56-204ENST00000431640 MRPS27Q92552 414 aaKnown RBP14.86□□□□□ -0.03
DDX56-204ENST00000431640 DBNDD1Q9H9R9 158 aa14.86□□□□□ -0.03
DDX56-204ENST00000431640 KCNQ5Q9NR82 932 aa14.86□□□□□ -0.03
DDX56-204ENST00000431640 USP25Q9UHP3 1055 aa14.86□□□□□ -0.03
DDX56-204ENST00000431640 ZKSCAN5Q9Y2L8 839 aa14.86□□□□□ -0.03
DDX56-204ENST00000431640 TACC3Q9Y6A5 838 aa14.86□□□□□ -0.03
DDX56-204ENST00000431640 CCDC88AQ3V6T2 1871 aa14.86□□□□□ -0.03
DDX56-204ENST00000431640 YDJCA8MPS7 323 aa14.85□□□□□ -0.03
DDX56-204ENST00000431640 U2AF2P26368 475 aaKnown RBP eCLIP14.85□□□□□ -0.031e-6■■■□□ 17.4
DDX56-204ENST00000431640 MECOMQ03112 1051 aa14.85□□□□□ -0.03
DDX56-204ENST00000431640 KIAA2012Q0VF49 1180 aa14.85□□□□□ -0.03
DDX56-204ENST00000431640 SNW1Q13573 536 aaKnown RBP14.85□□□□□ -0.03
DDX56-204ENST00000431640 SAFBQ15424 915 aaKnown RBP eCLIP14.85□□□□□ -0.03
DDX56-204ENST00000431640 ZNF804AQ7Z570 1209 aa14.85□□□□□ -0.03
DDX56-204ENST00000431640 FSIP1Q8NA03 581 aa14.85□□□□□ -0.03
DDX56-204ENST00000431640 WDR66Q8TBY9 1149 aa14.85□□□□□ -0.03
DDX56-204ENST00000431640 ZNF384Q8TF68 577 aa14.85□□□□□ -0.03
DDX56-204ENST00000431640 SDR42E1Q8WUS8 393 aa14.85□□□□□ -0.03
DDX56-204ENST00000431640 SENP2Q9HC62 589 aa14.85□□□□□ -0.03
DDX56-204ENST00000431640 ZNF500O60304 480 aaPredicted RBP14.85□□□□□ -0.03
DDX56-204ENST00000431640 DEXIO95424 95 aa14.85□□□□□ -0.03
DDX56-204ENST00000431640 CALM1P0DP23 149 aa14.85□□□□□ -0.03
DDX56-204ENST00000431640 CALM2P0DP24 149 aa14.85□□□□□ -0.03
DDX56-204ENST00000431640 CALM3P0DP25 149 aa14.85□□□□□ -0.03
DDX56-204ENST00000431640 DYNLL1P63167 89 aaKnown RBP14.85□□□□□ -0.03
DDX56-204ENST00000431640 SLC39A14Q15043 492 aa14.85□□□□□ -0.03
DDX56-204ENST00000431640 IQCA1Q86XH1 822 aa14.85□□□□□ -0.03
DDX56-204ENST00000431640 RTKN2Q8IZC4 609 aa14.85□□□□□ -0.03
DDX56-204ENST00000431640 FANCBQ8NB91 859 aa14.85□□□□□ -0.03
DDX56-204ENST00000431640 PHKBQ93100 1093 aa14.85□□□□□ -0.03
DDX56-204ENST00000431640 SLC26A6Q9BXS9 759 aa14.85□□□□□ -0.03
DDX56-204ENST00000431640 CLIC4Q9Y696 253 aa14.85□□□□□ -0.03
DDX56-204ENST00000431640 SBF1O95248 1867 aa14.85□□□□□ -0.03
DDX56-204ENST00000431640 PPP6R2O75170 966 aa14.84□□□□□ -0.03
DDX56-204ENST00000431640 RXRAP19793 462 aa14.84□□□□□ -0.03
DDX56-204ENST00000431640 GSTO1P78417 241 aa14.84□□□□□ -0.03
DDX56-204ENST00000431640 CHAF1AQ13111 956 aaPredicted RBP14.84□□□□□ -0.03
DDX56-204ENST00000431640 ANO6Q4KMQ2 910 aa14.84□□□□□ -0.03
DDX56-204ENST00000431640 SBK1Q52WX2 424 aa14.84□□□□□ -0.03
DDX56-204ENST00000431640 CCDC144CPQ8IYA2 1237 aa14.84□□□□□ -0.03
DDX56-204ENST00000431640 ZNF654Q8IZM8 581 aa14.84□□□□□ -0.03
DDX56-204ENST00000431640 ZSCAN10Q96SZ4 725 aaPredicted RBP14.84□□□□□ -0.03
DDX56-204ENST00000431640 FTOQ9C0B1 505 aaKnown RBP eCLIP14.84□□□□□ -0.03
DDX56-204ENST00000431640 LTBP3Q9NS15 1303 aa14.83□□□□□ -0.04
DDX56-204ENST00000431640 GOLGA6L6A8MZA4 724 aa14.83□□□□□ -0.04
DDX56-204ENST00000431640 KIF28PB7ZC32 967 aa14.83□□□□□ -0.04
DDX56-204ENST00000431640 PPIP5K2O43314 1243 aa14.83□□□□□ -0.04
DDX56-204ENST00000431640 ORC4O43929 436 aa14.83□□□□□ -0.04
DDX56-204ENST00000431640 ECE2O60344 883 aa14.83□□□□□ -0.04
DDX56-204ENST00000431640 CMA1P23946 247 aa14.83□□□□□ -0.04
DDX56-204ENST00000431640 SEC23AQ15436 765 aa14.83□□□□□ -0.04
DDX56-204ENST00000431640 CTR9Q6PD62 1173 aa14.83□□□□□ -0.04
DDX56-204ENST00000431640 CERS3Q8IU89 383 aa14.83□□□□□ -0.04
DDX56-204ENST00000431640 CRACR2BQ8N4Y2 399 aaPredicted RBP14.83□□□□□ -0.04
DDX56-204ENST00000431640 EYA3Q99504 573 aa14.83□□□□□ -0.04
DDX56-204ENST00000431640 MXD3Q9BW11 206 aa14.83□□□□□ -0.04
DDX56-204ENST00000431640 ZC3H12CQ9C0D7 883 aaKnown RBP14.83□□□□□ -0.04
DDX56-204ENST00000431640 COA1Q9GZY4 146 aa14.83□□□□□ -0.04
DDX56-204ENST00000431640 TMX4Q9H1E5 349 aaPredicted RBP14.83□□□□□ -0.04
DDX56-204ENST00000431640 GOLPH3LQ9H4A5 285 aa14.83□□□□□ -0.04
DDX56-204ENST00000431640 RBM28Q9NW13 759 aaKnown RBP14.83□□□□□ -0.04
DDX56-204ENST00000431640 ARPP21Q9UBL0 812 aaPredicted RBP14.83□□□□□ -0.04
DDX56-204ENST00000431640 RANBP6O60518 1105 aaKnown RBP14.82□□□□□ -0.04
DDX56-204ENST00000431640 LDHCP07864 332 aa14.82□□□□□ -0.04
DDX56-204ENST00000431640 XBP1P17861 261 aa14.82□□□□□ -0.04
DDX56-204ENST00000431640 PRDX5P30044 214 aa14.82□□□□□ -0.04
DDX56-204ENST00000431640 ZNF165P49910 485 aa14.82□□□□□ -0.04
DDX56-204ENST00000431640 AKAP17AQ02040 695 aaKnown RBP14.82□□□□□ -0.04
DDX56-204ENST00000431640 STX1AQ16623 288 aa14.82□□□□□ -0.04
DDX56-204ENST00000431640 SOGA3Q5TF21 947 aa14.82□□□□□ -0.04
DDX56-204ENST00000431640 CATIPQ7Z7H3 387 aa14.82□□□□□ -0.04
DDX56-204ENST00000431640 FMR1NBQ8N0W7 255 aaPredicted RBP14.82□□□□□ -0.04
DDX56-204ENST00000431640 CERS5Q8N5B7 392 aa14.82□□□□□ -0.04
DDX56-204ENST00000431640 ZKSCAN3Q9BRR0 538 aa14.82□□□□□ -0.04
DDX56-204ENST00000431640 MYL10Q9BUA6 226 aa14.82□□□□□ -0.04
DDX56-204ENST00000431640 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.82□□□□□ -0.04
DDX56-204ENST00000431640 TAOK3Q9H2K8 898 aa14.82□□□□□ -0.04
DDX56-204ENST00000431640 CBX8Q9HC52 389 aa14.82□□□□□ -0.04
DDX56-204ENST00000431640 ANO10Q9NW15 660 aa14.82□□□□□ -0.04
DDX56-204ENST00000431640 TNKSO95271 1327 aa14.82□□□□□ -0.04
DDX56-204ENST00000431640 DICER1Q9UPY3 1922 aaKnown RBP14.81□□□□□ -0.04
DDX56-204ENST00000431640 USP17L12C9JPN9 530 aa14.81□□□□□ -0.04
DDX56-204ENST00000431640 USP17L21D6R901 530 aa14.81□□□□□ -0.04
DDX56-204ENST00000431640 PDE4BQ07343 736 aa14.81□□□□□ -0.04
DDX56-204ENST00000431640 DZIP1Q86YF9 867 aaKnown RBP14.81□□□□□ -0.04
DDX56-204ENST00000431640 SUPT20HQ8NEM7 779 aa14.81□□□□□ -0.04
DDX56-204ENST00000431640 TIGD1Q96MW7 591 aa14.81□□□□□ -0.04
DDX56-204ENST00000431640 SDF4Q9BRK5 362 aa14.81□□□□□ -0.04
DDX56-204ENST00000431640 RNF26Q9BY78 433 aaPredicted RBP14.81□□□□□ -0.04
DDX56-204ENST00000431640 NAT10Q9H0A0 1025 aaKnown RBP14.81□□□□□ -0.04
DDX56-204ENST00000431640 FOXP1Q9H334 677 aaPredicted RBP14.81□□□□□ -0.04
DDX56-204ENST00000431640 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms