RNA–Protein interactions for RNA: ENST00000429578.5

LINC00887-203, long intergenic non-protein coding RNA 887, humanhuman

TSL 2 BASIC

Gene LINC00887, Length 1,717 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-203ENST00000429578 DNAJC18Q9H819 358 aa20.14■□□□□ 0.81
LINC00887-203ENST00000429578 ZSWIM5Q9P217 1185 aa20.14■□□□□ 0.81
LINC00887-203ENST00000429578 WDR19Q8NEZ3 1342 aa20.14■□□□□ 0.81
LINC00887-203ENST00000429578 TBC1D12O60347 775 aa20.13■□□□□ 0.81
LINC00887-203ENST00000429578 RANBP6O60518 1105 aaKnown RBP20.13■□□□□ 0.81
LINC00887-203ENST00000429578 RASA1P20936 1047 aa20.13■□□□□ 0.81
LINC00887-203ENST00000429578 ZNF444Q8N0Y2 327 aaPredicted RBP20.13■□□□□ 0.81
LINC00887-203ENST00000429578 ST18O60284 1047 aa20.13■□□□□ 0.81
LINC00887-203ENST00000429578 SHMT1P34896 483 aa20.13■□□□□ 0.81
LINC00887-203ENST00000429578 MAP3K10Q02779 954 aa20.13■□□□□ 0.81
LINC00887-203ENST00000429578 IFFO2Q5TF58 517 aa20.13■□□□□ 0.81
LINC00887-203ENST00000429578 CYB5R4Q7L1T6 521 aa20.13■□□□□ 0.81
LINC00887-203ENST00000429578 TTC14Q96N46 770 aa20.13■□□□□ 0.81
LINC00887-203ENST00000429578 MYH4Q9Y623 1939 aa20.12■□□□□ 0.81
LINC00887-203ENST00000429578 FAM196BA6NMK8 535 aa20.12■□□□□ 0.81
LINC00887-203ENST00000429578 HSPA1AP0DMV8 641 aaKnown RBP20.12■□□□□ 0.81
LINC00887-203ENST00000429578 HSPA1BP0DMV9 641 aaKnown RBP20.12■□□□□ 0.81
LINC00887-203ENST00000429578 SLURP2P0DP57 97 aa20.12■□□□□ 0.81
LINC00887-203ENST00000429578 ANTXR2P58335 489 aa20.12■□□□□ 0.81
LINC00887-203ENST00000429578 TATDN1Q6P1N9 297 aa20.12■□□□□ 0.81
LINC00887-203ENST00000429578 CHST3Q7LGC8 479 aa20.12■□□□□ 0.81
LINC00887-203ENST00000429578 KRT26Q7Z3Y9 468 aa20.12■□□□□ 0.81
LINC00887-203ENST00000429578 HOOK2Q96ED9 719 aa20.12■□□□□ 0.81
LINC00887-203ENST00000429578 TCEANC2Q96MN5 208 aa20.12■□□□□ 0.81
LINC00887-203ENST00000429578 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.12■□□□□ 0.81
LINC00887-203ENST00000429578 PDRG1Q9NUG6 133 aa20.12■□□□□ 0.81
LINC00887-203ENST00000429578 TSPY2A6NKD2 308 aa20.11■□□□□ 0.81
LINC00887-203ENST00000429578 PRC1O43663 620 aa20.11■□□□□ 0.81
LINC00887-203ENST00000429578 NBPF12Q5TAG4 269 aaPredicted RBP20.11■□□□□ 0.81
LINC00887-203ENST00000429578 ALDH8A1Q9H2A2 487 aaPredicted RBP20.11■□□□□ 0.81
LINC00887-203ENST00000429578 TFAP4Q01664 338 aa20.1■□□□□ 0.81
LINC00887-203ENST00000429578 MTA3Q9BTC8 594 aa20.1■□□□□ 0.81
LINC00887-203ENST00000429578 ADM5C9JUS6 153 aa20.1■□□□□ 0.81
LINC00887-203ENST00000429578 TSPY3P0CV98 308 aa20.1■□□□□ 0.81
LINC00887-203ENST00000429578 TSPY8P0CW00 308 aa20.1■□□□□ 0.81
LINC00887-203ENST00000429578 ANP32AP39687 249 aaKnown RBP20.1■□□□□ 0.81
LINC00887-203ENST00000429578 FMR1Q06787 632 aaKnown RBP eCLIP20.1■□□□□ 0.81
LINC00887-203ENST00000429578 SUPT20HL1Q3ZLR7 823 aa20.1■□□□□ 0.81
LINC00887-203ENST00000429578 FAM47AQ5JRC9 791 aa20.1■□□□□ 0.81
LINC00887-203ENST00000429578 PRAMEF18Q5VWM3 479 aa20.1■□□□□ 0.81
LINC00887-203ENST00000429578 CDC37L1Q7L3B6 337 aa20.1■□□□□ 0.81
LINC00887-203ENST00000429578 MIGA2Q7L4E1 593 aa20.1■□□□□ 0.81
LINC00887-203ENST00000429578 IQCA1Q86XH1 822 aa20.1■□□□□ 0.81
LINC00887-203ENST00000429578 FBXL16Q8N461 479 aa20.1■□□□□ 0.81
LINC00887-203ENST00000429578 TMEM87BQ96K49 555 aa20.1■□□□□ 0.81
LINC00887-203ENST00000429578 CCDC17Q96LX7 622 aa20.1■□□□□ 0.81
LINC00887-203ENST00000429578 ABT1Q9ULW3 272 aaKnown RBP20.1■□□□□ 0.81
LINC00887-203ENST00000429578 DOCK1Q14185 1865 aa20.09■□□□□ 0.81
LINC00887-203ENST00000429578 TRAF5O00463 557 aa20.09■□□□□ 0.81
LINC00887-203ENST00000429578 AK2P54819 239 aa20.09■□□□□ 0.81
LINC00887-203ENST00000429578 CERKLQ49MI3 558 aaPredicted RBP20.09■□□□□ 0.81
LINC00887-203ENST00000429578 Q6ZUG5 572 aa20.09■□□□□ 0.81
LINC00887-203ENST00000429578 AGXT2Q9BYV1 514 aa20.09■□□□□ 0.81
LINC00887-203ENST00000429578 SSC5DA1L4H1 1573 aa20.09■□□□□ 0.81
LINC00887-203ENST00000429578 VEGFBP49765 207 aa20.08■□□□□ 0.81
LINC00887-203ENST00000429578 SART3Q15020 963 aaKnown RBP20.08■□□□□ 0.81
LINC00887-203ENST00000429578 DEFB115Q30KQ5 88 aa20.08■□□□□ 0.81
LINC00887-203ENST00000429578 DCAF15Q66K64 600 aa20.08■□□□□ 0.81
LINC00887-203ENST00000429578 USP48Q86UV5 1035 aa20.08■□□□□ 0.81
LINC00887-203ENST00000429578 NEDD1Q8NHV4 660 aa20.08■□□□□ 0.81
LINC00887-203ENST00000429578 SNX21Q969T3 373 aa20.08■□□□□ 0.81
LINC00887-203ENST00000429578 UBAC1Q9BSL1 405 aa20.08■□□□□ 0.81
LINC00887-203ENST00000429578 LRRC2Q9BYS8 371 aa20.08■□□□□ 0.81
LINC00887-203ENST00000429578 PLIN4Q96Q06 1357 aa20.08■□□□□ 0.81
LINC00887-203ENST00000429578 RASSF10A6NK89 507 aa20.07■□□□□ 0.8
LINC00887-203ENST00000429578 CD2BP2O95400 341 aaKnown RBP20.07■□□□□ 0.8
LINC00887-203ENST00000429578 FGD1P98174 961 aa20.07■□□□□ 0.8
LINC00887-203ENST00000429578 ANKRD1Q15327 319 aa20.07■□□□□ 0.8
LINC00887-203ENST00000429578 IGDCC4Q8TDY8 1250 aa20.07■□□□□ 0.8
LINC00887-203ENST00000429578 ZSCAN10Q96SZ4 725 aaPredicted RBP20.07■□□□□ 0.8
LINC00887-203ENST00000429578 ZKSCAN3Q9BRR0 538 aa20.07■□□□□ 0.8
LINC00887-203ENST00000429578 GLIS2Q9BZE0 524 aaPredicted RBP20.07■□□□□ 0.8
LINC00887-203ENST00000429578 TCP11L1Q9NUJ3 509 aa20.07■□□□□ 0.8
LINC00887-203ENST00000429578 OTOFQ9HC10 1997 aa20.07■□□□□ 0.8
LINC00887-203ENST00000429578 TRPM7Q96QT4 1865 aa20.07■□□□□ 0.8
LINC00887-203ENST00000429578 PAPPA2Q9BXP8 1791 aa20.07■□□□□ 0.8
LINC00887-203ENST00000429578 ERICH2A1L162 156 aa20.07■□□□□ 0.8
LINC00887-203ENST00000429578 IFIT3O14879 490 aaKnown RBP20.07■□□□□ 0.8
LINC00887-203ENST00000429578 AKR1B1P15121 316 aa20.07■□□□□ 0.8
LINC00887-203ENST00000429578 MCM2P49736 904 aa20.07■□□□□ 0.8
LINC00887-203ENST00000429578 TOB2Q14106 344 aaPredicted RBP20.07■□□□□ 0.8
LINC00887-203ENST00000429578 ANGEL1Q9UNK9 670 aaKnown RBP20.07■□□□□ 0.8
LINC00887-203ENST00000429578 TNKSO95271 1327 aa20.06■□□□□ 0.8
LINC00887-203ENST00000429578 SH2B2O14492 632 aaPredicted RBP20.06■□□□□ 0.8
LINC00887-203ENST00000429578 TMEM67Q5HYA8 995 aa20.06■□□□□ 0.8
LINC00887-203ENST00000429578 IL17RBQ9NRM6 502 aa20.06■□□□□ 0.8
LINC00887-203ENST00000429578 PHF20L1A8MW92 1017 aa20.05■□□□□ 0.8
LINC00887-203ENST00000429578 RRP1BQ14684 758 aaKnown RBP20.05■□□□□ 0.8
LINC00887-203ENST00000429578 SEC23AQ15436 765 aa20.05■□□□□ 0.8
LINC00887-203ENST00000429578 ABCB5Q2M3G0 1257 aa20.05■□□□□ 0.8
LINC00887-203ENST00000429578 CCDC178Q5BJE1 867 aa20.05■□□□□ 0.8
LINC00887-203ENST00000429578 COL13A1Q5TAT6 717 aaPredicted RBP20.05■□□□□ 0.8
LINC00887-203ENST00000429578 DLK2Q6UY11 383 aa20.05■□□□□ 0.8
LINC00887-203ENST00000429578 BRF1Q92994 677 aa20.05■□□□□ 0.8
LINC00887-203ENST00000429578 CDCA5Q96FF9 252 aa20.05■□□□□ 0.8
LINC00887-203ENST00000429578 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.05■□□□□ 0.8
LINC00887-203ENST00000429578 ZNF341Q9BYN7 854 aa20.05■□□□□ 0.8
LINC00887-203ENST00000429578 MPHOSPH10O00566 681 aaKnown RBP20.05■□□□□ 0.8
LINC00887-203ENST00000429578 NMT2O60551 498 aa20.05■□□□□ 0.8
LINC00887-203ENST00000429578 LIFRP42702 1097 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms