RNA–Protein interactions for RNA: ENST00000429544.6

MBD4-203, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD4, Length 2,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-203ENST00000429544 SBK1Q52WX2 424 aa18.73■□□□□ 0.59
MBD4-203ENST00000429544 SLC27A3Q5K4L6 730 aa18.73■□□□□ 0.59
MBD4-203ENST00000429544 MCM9Q9NXL9 1143 aa18.73■□□□□ 0.59
MBD4-203ENST00000429544 NAV1Q8NEY1 1877 aa18.73■□□□□ 0.59
MBD4-203ENST00000429544 USP17L8P0C7I0 530 aa18.73■□□□□ 0.59
MBD4-203ENST00000429544 ZNF75DP51815 510 aa18.73■□□□□ 0.59
MBD4-203ENST00000429544 PPP2R5BQ15173 497 aa18.73■□□□□ 0.59
MBD4-203ENST00000429544 DIXDC1Q155Q3 683 aa18.73■□□□□ 0.59
MBD4-203ENST00000429544 CLIC6Q96NY7 704 aa18.73■□□□□ 0.59
MBD4-203ENST00000429544 USP5P45974 858 aa18.72■□□□□ 0.59
MBD4-203ENST00000429544 NR5A1Q13285 461 aa18.72■□□□□ 0.59
MBD4-203ENST00000429544 SHC4Q6S5L8 630 aa18.72■□□□□ 0.59
MBD4-203ENST00000429544 RBM17Q96I25 401 aaKnown RBP18.72■□□□□ 0.59
MBD4-203ENST00000429544 FOXP1Q9H334 677 aaPredicted RBP18.72■□□□□ 0.59
MBD4-203ENST00000429544 KIAA1468Q9P260 1216 aa18.72■□□□□ 0.59
MBD4-203ENST00000429544 hCG_1642624A0A1W2PR95 340 aa18.72■□□□□ 0.59
MBD4-203ENST00000429544 GOLGA6L6A8MZA4 724 aa18.72■□□□□ 0.59
MBD4-203ENST00000429544 TOB1P50616 345 aaPredicted RBP18.72■□□□□ 0.59
MBD4-203ENST00000429544 PDE4BQ07343 736 aa18.72■□□□□ 0.59
MBD4-203ENST00000429544 KRT27Q7Z3Y8 459 aa18.72■□□□□ 0.59
MBD4-203ENST00000429544 PLA2G4DQ86XP0 818 aa18.72■□□□□ 0.59
MBD4-203ENST00000429544 CEP57L1Q8IYX8 460 aa18.72■□□□□ 0.59
MBD4-203ENST00000429544 OXER1Q8TDS5 423 aa18.72■□□□□ 0.59
MBD4-203ENST00000429544 SH3RF3Q8TEJ3 882 aaPredicted RBP18.72■□□□□ 0.59
MBD4-203ENST00000429544 RBM28Q9NW13 759 aaKnown RBP18.72■□□□□ 0.59
MBD4-203ENST00000429544 DDAH1O94760 285 aa18.71■□□□□ 0.59
MBD4-203ENST00000429544 CALM1P0DP23 149 aa18.71■□□□□ 0.59
MBD4-203ENST00000429544 CALM2P0DP24 149 aa18.71■□□□□ 0.59
MBD4-203ENST00000429544 CALM3P0DP25 149 aa18.71■□□□□ 0.59
MBD4-203ENST00000429544 SYKP43405 635 aa18.71■□□□□ 0.59
MBD4-203ENST00000429544 DDR1Q08345 913 aa18.71■□□□□ 0.59
MBD4-203ENST00000429544 FUT2Q10981 343 aa18.71■□□□□ 0.59
MBD4-203ENST00000429544 TROAPQ12815 778 aa18.71■□□□□ 0.59
MBD4-203ENST00000429544 C15orf52Q6ZUT6 534 aaKnown RBP18.71■□□□□ 0.59
MBD4-203ENST00000429544 CUTAO60888 179 aa18.71■□□□□ 0.58
MBD4-203ENST00000429544 GSTO1P78417 241 aa18.71■□□□□ 0.58
MBD4-203ENST00000429544 PKN1Q16512 942 aa18.71■□□□□ 0.58
MBD4-203ENST00000429544 DHX40Q8IX18 779 aaKnown RBP18.71■□□□□ 0.58
MBD4-203ENST00000429544 SHISA4Q96DD7 197 aa18.71■□□□□ 0.58
MBD4-203ENST00000429544 VPS54Q9P1Q0 977 aa18.71■□□□□ 0.58
MBD4-203ENST00000429544 GGA1Q9UJY5 639 aa18.71■□□□□ 0.58
MBD4-203ENST00000429544 TSPY2A6NKD2 308 aa18.7■□□□□ 0.58
MBD4-203ENST00000429544 BECN2A8MW95 431 aa18.7■□□□□ 0.58
MBD4-203ENST00000429544 ZRSR1Q15695 479 aaKnown RBP18.7■□□□□ 0.58
MBD4-203ENST00000429544 RESP18Q5W5W9 173 aa18.7■□□□□ 0.58
MBD4-203ENST00000429544 DRC7Q8IY82 874 aa18.7■□□□□ 0.58
MBD4-203ENST00000429544 KCNF1Q9H3M0 494 aa18.7■□□□□ 0.58
MBD4-203ENST00000429544 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.7■□□□□ 0.58
MBD4-203ENST00000429544 HPSEQ9Y251 543 aa18.7■□□□□ 0.58
MBD4-203ENST00000429544 CDK5RAP2Q96SN8 1893 aa18.7■□□□□ 0.58
MBD4-203ENST00000429544 PRPF3O43395 683 aaKnown RBP18.69■□□□□ 0.58
MBD4-203ENST00000429544 ATP2B4P23634 1241 aa18.69■□□□□ 0.58
MBD4-203ENST00000429544 AOPEPQ8N6M6 819 aa18.69■□□□□ 0.58
MBD4-203ENST00000429544 V9GY48 417 aaPredicted RBP18.69■□□□□ 0.58
MBD4-203ENST00000429544 TPM3P06753 285 aa18.69■□□□□ 0.58
MBD4-203ENST00000429544 TMTC3Q6ZXV5 915 aa18.69■□□□□ 0.58
MBD4-203ENST00000429544 CD209Q9NNX6 404 aa18.69■□□□□ 0.58
MBD4-203ENST00000429544 BIN1O00499 593 aa18.68■□□□□ 0.58
MBD4-203ENST00000429544 XBP1P17861 261 aa18.68■□□□□ 0.58
MBD4-203ENST00000429544 DPCR1Q3MIW9 517 aa18.68■□□□□ 0.58
MBD4-203ENST00000429544 RILPL1Q5EBL4 403 aa18.68■□□□□ 0.58
MBD4-203ENST00000429544 C12orf60Q5U649 245 aa18.68■□□□□ 0.58
MBD4-203ENST00000429544 KRI1Q8N9T8 703 aaKnown RBP18.68■□□□□ 0.58
MBD4-203ENST00000429544 NOL10Q9BSC4 688 aaKnown RBP18.68■□□□□ 0.58
MBD4-203ENST00000429544 NAT10Q9H0A0 1025 aaKnown RBP18.68■□□□□ 0.58
MBD4-203ENST00000429544 MKRN1Q9UHC7 482 aaKnown RBP18.68■□□□□ 0.58
MBD4-203ENST00000429544 POLRMTO00411 1230 aaKnown RBP18.68■□□□□ 0.58
MBD4-203ENST00000429544 PTGS1P23219 599 aa18.68■□□□□ 0.58
MBD4-203ENST00000429544 C17orf53Q8N3J3 647 aaPredicted RBP18.68■□□□□ 0.58
MBD4-203ENST00000429544 CTCFLQ8NI51 663 aaPredicted RBP18.68■□□□□ 0.58
MBD4-203ENST00000429544 DYNLL2Q96FJ2 89 aa18.68■□□□□ 0.58
MBD4-203ENST00000429544 TIGD1Q96MW7 591 aa18.68■□□□□ 0.58
MBD4-203ENST00000429544 PCDHB6Q9Y5E3 794 aa18.68■□□□□ 0.58
MBD4-203ENST00000429544 CNTNAP5Q8WYK1 1306 aa18.68■□□□□ 0.58
MBD4-203ENST00000429544 BAZ2BQ9UIF8 2168 aaKnown RBP18.67■□□□□ 0.58
MBD4-203ENST00000429544 FAM237AA0A1B0GTK4 181 aa18.67■□□□□ 0.58
MBD4-203ENST00000429544 BAG3O95817 575 aa18.67■□□□□ 0.58
MBD4-203ENST00000429544 ATP2B1P20020 1258 aa18.67■□□□□ 0.58
MBD4-203ENST00000429544 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.67■□□□□ 0.58
MBD4-203ENST00000429544 TGFBRAP1Q8WUH2 860 aa18.67■□□□□ 0.58
MBD4-203ENST00000429544 PIBF1Q8WXW3 757 aa18.67■□□□□ 0.58
MBD4-203ENST00000429544 SARM1Q6SZW1 724 aa18.67■□□□□ 0.58
MBD4-203ENST00000429544 PHF20Q9BVI0 1012 aa18.67■□□□□ 0.58
MBD4-203ENST00000429544 CABP5Q9NP86 173 aa18.67■□□□□ 0.58
MBD4-203ENST00000429544 FAM205CA6NFA0 338 aa18.66■□□□□ 0.58
MBD4-203ENST00000429544 IGSF3O75054 1194 aa18.66■□□□□ 0.58
MBD4-203ENST00000429544 LDHCP07864 332 aa18.66■□□□□ 0.58
MBD4-203ENST00000429544 KRT2P35908 639 aa18.66■□□□□ 0.58
MBD4-203ENST00000429544 TXNRD1Q16881 649 aa18.66■□□□□ 0.58
MBD4-203ENST00000429544 SPECC1Q5M775 1068 aa18.66■□□□□ 0.58
MBD4-203ENST00000429544 SRBD1Q8N5C6 995 aaKnown RBP18.66■□□□□ 0.58
MBD4-203ENST00000429544 BBOX1O75936 387 aa18.66■□□□□ 0.58
MBD4-203ENST00000429544 NLRP12P59046 1061 aa18.66■□□□□ 0.58
MBD4-203ENST00000429544 PPP4CP60510 307 aa18.66■□□□□ 0.58
MBD4-203ENST00000429544 TFAP4Q01664 338 aa18.66■□□□□ 0.58
MBD4-203ENST00000429544 GRIN1Q05586 938 aa18.66■□□□□ 0.58
MBD4-203ENST00000429544 CCDC186Q7Z3E2 898 aa18.66■□□□□ 0.58
MBD4-203ENST00000429544 RTFDC1Q9BY42 306 aaPredicted RBP18.66■□□□□ 0.58
MBD4-203ENST00000429544 CLIP2Q9UDT6 1046 aa18.66■□□□□ 0.58
MBD4-203ENST00000429544 POLLQ9UGP5 575 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms