RNA–Protein interactions for RNA: ENST00000428549.8

ABCA8-202, Transcript of ATP binding cassette subfamily A member 8, humanhuman

TSL 1 (best)

Gene ABCA8, Length 1,622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA8-202ENST00000428549 PRM3Q9NNZ6 103 aa10.32□□□□□ -0.76
ABCA8-202ENST00000428549 RABL2BQ9UNT1 228 aa10.32□□□□□ -0.76
ABCA8-202ENST00000428549 RBM19Q9Y4C8 960 aaKnown RBP10.32□□□□□ -0.76
ABCA8-202ENST00000428549 ORC4O43929 436 aa10.31□□□□□ -0.76
ABCA8-202ENST00000428549 MDM2Q00987 491 aaPredicted RBP10.31□□□□□ -0.76
ABCA8-202ENST00000428549 TRIM29Q14134 588 aa10.31□□□□□ -0.76
ABCA8-202ENST00000428549 Q3C1V9 767 aa10.31□□□□□ -0.76
ABCA8-202ENST00000428549 TMEM259Q4ZIN3 620 aa10.31□□□□□ -0.76
ABCA8-202ENST00000428549 CCDC158Q5M9N0 1113 aa10.31□□□□□ -0.76
ABCA8-202ENST00000428549 ACBD5Q5T8D3 534 aaPredicted RBP10.31□□□□□ -0.76
ABCA8-202ENST00000428549 TMEM164Q5U3C3 297 aa10.31□□□□□ -0.76
ABCA8-202ENST00000428549 EP400NLQ6ZTU2 488 aa10.31□□□□□ -0.76
ABCA8-202ENST00000428549 BRSK2Q8IWQ3 736 aa10.31□□□□□ -0.76
ABCA8-202ENST00000428549 IFNL3Q8IZI9 196 aa10.31□□□□□ -0.76
ABCA8-202ENST00000428549 SMCR8Q8TEV9 937 aaPredicted RBP10.31□□□□□ -0.76
ABCA8-202ENST00000428549 JARID2Q92833 1246 aaPredicted RBP10.31□□□□□ -0.76
ABCA8-202ENST00000428549 TMEM87BQ96K49 555 aa10.31□□□□□ -0.76
ABCA8-202ENST00000428549 DHX36Q9H2U1 1008 aaKnown RBP10.31□□□□□ -0.76
ABCA8-202ENST00000428549 TFIP11Q9UBB9 837 aaKnown RBP10.31□□□□□ -0.76
ABCA8-202ENST00000428549 LRRFIP2Q9Y608 721 aaKnown RBP10.31□□□□□ -0.76
ABCA8-202ENST00000428549 SCN7AQ01118 1682 aa10.31□□□□□ -0.76
ABCA8-202ENST00000428549 SKILP12757 684 aa10.3□□□□□ -0.76
ABCA8-202ENST00000428549 HOXC13P31276 330 aa10.3□□□□□ -0.76
ABCA8-202ENST00000428549 GEMIN4P57678 1058 aaKnown RBP10.3□□□□□ -0.76
ABCA8-202ENST00000428549 ATP8B2P98198 1209 aa10.3□□□□□ -0.76
ABCA8-202ENST00000428549 EVX2Q03828 476 aa10.3□□□□□ -0.76
ABCA8-202ENST00000428549 MTX1Q13505 466 aa10.3□□□□□ -0.76
ABCA8-202ENST00000428549 GRAMD1BQ3KR37 738 aa10.3□□□□□ -0.76
ABCA8-202ENST00000428549 DCAF8Q5TAQ9 597 aa10.3□□□□□ -0.76
ABCA8-202ENST00000428549 SAMD14Q8IZD0 417 aaPredicted RBP10.3□□□□□ -0.76
ABCA8-202ENST00000428549 CLASRPQ8N2M8 674 aaKnown RBP10.3□□□□□ -0.76
ABCA8-202ENST00000428549 TAF4BQ92750 862 aa10.3□□□□□ -0.76
ABCA8-202ENST00000428549 XPO4Q9C0E2 1151 aaKnown RBP10.3□□□□□ -0.76
ABCA8-202ENST00000428549 COMMD8Q9NX08 183 aa10.3□□□□□ -0.76
ABCA8-202ENST00000428549 NARFQ9UHQ1 456 aa10.3□□□□□ -0.76
ABCA8-202ENST00000428549 NUP98P52948 1817 aa10.3□□□□□ -0.76
ABCA8-202ENST00000428549 USP42Q9H9J4 1324 aaKnown RBP10.3□□□□□ -0.76
ABCA8-202ENST00000428549 TMEM110-MUSTN1A8MSY1 372 aa10.29□□□□□ -0.76
ABCA8-202ENST00000428549 ATP5J2-PTCD1G3V325 749 aa10.29□□□□□ -0.76
ABCA8-202ENST00000428549 KIF3CO14782 793 aa10.29□□□□□ -0.76
ABCA8-202ENST00000428549 FIBPO43427 364 aa10.29□□□□□ -0.76
ABCA8-202ENST00000428549 CAMTA2O94983 1202 aa10.29□□□□□ -0.76
ABCA8-202ENST00000428549 TPM3P06753 285 aa10.29□□□□□ -0.76
ABCA8-202ENST00000428549 GYS1P13807 737 aa10.29□□□□□ -0.76
ABCA8-202ENST00000428549 GPSM2P81274 684 aa10.29□□□□□ -0.76
ABCA8-202ENST00000428549 SLC4A8Q2Y0W8 1093 aa10.29□□□□□ -0.76
ABCA8-202ENST00000428549 FAM133BQ5BKY9 247 aaKnown RBP10.29□□□□□ -0.76
ABCA8-202ENST00000428549 SRP68Q9UHB9 627 aaKnown RBP10.29□□□□□ -0.76
ABCA8-202ENST00000428549 LRP5O75197 1615 aa10.29□□□□□ -0.76
ABCA8-202ENST00000428549 PRRT4C9JH25 899 aa10.29□□□□□ -0.76
ABCA8-202ENST00000428549 H7C1W4 665 aa10.29□□□□□ -0.76
ABCA8-202ENST00000428549 CASP7P55210 303 aa10.29□□□□□ -0.76
ABCA8-202ENST00000428549 ALFQ53S48 1182 aa10.29□□□□□ -0.76
ABCA8-202ENST00000428549 ANKRD45Q5TZF3 282 aa10.29□□□□□ -0.76
ABCA8-202ENST00000428549 JAKMIP3Q5VZ66 844 aa10.29□□□□□ -0.76
ABCA8-202ENST00000428549 SSH3Q8TE77 659 aa10.29□□□□□ -0.76
ABCA8-202ENST00000428549 TBC1D20Q96BZ9 403 aa10.29□□□□□ -0.76
ABCA8-202ENST00000428549 SUCLG2Q96I99 432 aa10.29□□□□□ -0.76
ABCA8-202ENST00000428549 RNPC3Q96LT9 517 aaKnown RBP10.29□□□□□ -0.76
ABCA8-202ENST00000428549 SERINC2Q96SA4 455 aa10.29□□□□□ -0.76
ABCA8-202ENST00000428549 DCTPP1Q9H773 170 aa10.29□□□□□ -0.76
ABCA8-202ENST00000428549 PTPRHQ9HD43 1115 aa10.29□□□□□ -0.76
ABCA8-202ENST00000428549 HOMER2Q9NSB8 354 aa10.29□□□□□ -0.76
ABCA8-202ENST00000428549 DCAF16Q9NXF7 216 aa10.29□□□□□ -0.76
ABCA8-202ENST00000428549 USP25Q9UHP3 1055 aa10.29□□□□□ -0.76
ABCA8-202ENST00000428549 GTPBP10A4D1E9 387 aaKnown RBP10.28□□□□□ -0.76
ABCA8-202ENST00000428549 TSPAN6O43657 245 aa10.28□□□□□ -0.76
ABCA8-202ENST00000428549 LZTS3O60299 673 aaPredicted RBP10.28□□□□□ -0.76
ABCA8-202ENST00000428549 PCCAP05165 728 aaPredicted RBP10.28□□□□□ -0.76
ABCA8-202ENST00000428549 ARID5AQ03989 594 aa10.28□□□□□ -0.76
ABCA8-202ENST00000428549 HLFQ16534 295 aa10.28□□□□□ -0.76
ABCA8-202ENST00000428549 SPECC1Q5M775 1068 aa10.28□□□□□ -0.76
ABCA8-202ENST00000428549 USPL1Q5W0Q7 1092 aa10.28□□□□□ -0.76
ABCA8-202ENST00000428549 ALKBH2Q6NS38 261 aa10.28□□□□□ -0.76
ABCA8-202ENST00000428549 ZNF34Q8IZ26 560 aa10.28□□□□□ -0.76
ABCA8-202ENST00000428549 APPL2Q8NEU8 664 aa10.28□□□□□ -0.76
ABCA8-202ENST00000428549 GIMAP1Q8WWP7 306 aa10.28□□□□□ -0.76
ABCA8-202ENST00000428549 E2F7Q96AV8 911 aa10.28□□□□□ -0.76
ABCA8-202ENST00000428549 ZNF396Q96N95 335 aaPredicted RBP10.28□□□□□ -0.76
ABCA8-202ENST00000428549 HOXC10Q9NYD6 342 aa10.28□□□□□ -0.76
ABCA8-202ENST00000428549 PNMA6EA0A0J9YXQ4 647 aa10.27□□□□□ -0.77
ABCA8-202ENST00000428549 LILRB3O75022 631 aa10.27□□□□□ -0.77
ABCA8-202ENST00000428549 TCEA3O75764 348 aa10.27□□□□□ -0.77
ABCA8-202ENST00000428549 LETM1O95202 739 aaPredicted RBP10.27□□□□□ -0.77
ABCA8-202ENST00000428549 MMP10P09238 476 aa10.27□□□□□ -0.77
ABCA8-202ENST00000428549 C4AP0C0L4 1744 aa10.27□□□□□ -0.77
ABCA8-202ENST00000428549 NUCB1Q02818 461 aa10.27□□□□□ -0.77
ABCA8-202ENST00000428549 PTK7Q13308 1070 aa10.27□□□□□ -0.77
ABCA8-202ENST00000428549 RABL6Q3YEC7 729 aaPredicted RBP10.27□□□□□ -0.77
ABCA8-202ENST00000428549 PARP10Q53GL7 1025 aa10.27□□□□□ -0.77
ABCA8-202ENST00000428549 ZCCHC8Q6NZY4 707 aaKnown RBP10.27□□□□□ -0.77
ABCA8-202ENST00000428549 PDXDC2PQ6P474 469 aa10.27□□□□□ -0.77
ABCA8-202ENST00000428549 UBE3BQ7Z3V4 1068 aa10.27□□□□□ -0.77
ABCA8-202ENST00000428549 C11orf74Q86VG3 221 aa10.27□□□□□ -0.77
ABCA8-202ENST00000428549 NLRP10Q86W26 655 aa10.27□□□□□ -0.77
ABCA8-202ENST00000428549 MICALL1Q8N3F8 863 aa10.27□□□□□ -0.77
ABCA8-202ENST00000428549 TMEM87AQ8NBN3 555 aa10.27□□□□□ -0.77
ABCA8-202ENST00000428549 MNS1Q8NEH6 495 aa10.27□□□□□ -0.77
ABCA8-202ENST00000428549 ERCC4Q92889 916 aaPredicted RBP10.27□□□□□ -0.77
ABCA8-202ENST00000428549 BHMTQ93088 406 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms