RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 CTGFP29279 349 aa24.88■■□□□ 1.57
PKNOX1-202ENST00000418336 SPP2Q13103 211 aa24.88■■□□□ 1.57
PKNOX1-202ENST00000418336 TREML2Q5T2D2 321 aa24.88■■□□□ 1.57
PKNOX1-202ENST00000418336 ZSCAN25Q6NSZ9 544 aa24.88■■□□□ 1.57
PKNOX1-202ENST00000418336 FASTKD5Q7L8L6 764 aaKnown RBP24.88■■□□□ 1.57
PKNOX1-202ENST00000418336 OTOP1Q7RTM1 612 aa24.88■■□□□ 1.57
PKNOX1-202ENST00000418336 CRACR2BQ8N4Y2 399 aaPredicted RBP24.88■■□□□ 1.57
PKNOX1-202ENST00000418336 STRBPQ96SI9 672 aaKnown RBP24.88■■□□□ 1.57
PKNOX1-202ENST00000418336 TBC1D2Q9BYX2 928 aa24.88■■□□□ 1.57
PKNOX1-202ENST00000418336 GINM1Q9NU53 330 aa24.88■■□□□ 1.57
PKNOX1-202ENST00000418336 MCM9Q9NXL9 1143 aa24.88■■□□□ 1.57
PKNOX1-202ENST00000418336 ERC2O15083 957 aa24.87■■□□□ 1.57
PKNOX1-202ENST00000418336 ASNSP08243 561 aa24.87■■□□□ 1.57
PKNOX1-202ENST00000418336 GUCY1A2P33402 732 aa24.87■■□□□ 1.57
PKNOX1-202ENST00000418336 PDE1AP54750 535 aa24.87■■□□□ 1.57
PKNOX1-202ENST00000418336 APPBP2Q92624 585 aa24.87■■□□□ 1.57
PKNOX1-202ENST00000418336 RWDD1Q9H446 243 aaPredicted RBP24.87■■□□□ 1.57
PKNOX1-202ENST00000418336 ATP8A2Q9NTI2 1148 aa24.87■■□□□ 1.57
PKNOX1-202ENST00000418336 CYP2C8P10632 490 aa24.86■■□□□ 1.57
PKNOX1-202ENST00000418336 PKN2Q16513 984 aaKnown RBP24.86■■□□□ 1.57
PKNOX1-202ENST00000418336 PROCA1Q8NCQ7 364 aaPredicted RBP24.86■■□□□ 1.57
PKNOX1-202ENST00000418336 ERO1AQ96HE7 468 aa24.86■■□□□ 1.57
PKNOX1-202ENST00000418336 AGTPBP1Q9UPW5 1226 aa24.86■■□□□ 1.57
PKNOX1-202ENST00000418336 M0R2C6 588 aa24.85■■□□□ 1.57
PKNOX1-202ENST00000418336 GH2P01242 217 aa24.85■■□□□ 1.57
PKNOX1-202ENST00000418336 BCRP11274 1271 aa24.85■■□□□ 1.57
PKNOX1-202ENST00000418336 NUCB1Q02818 461 aa24.85■■□□□ 1.57
PKNOX1-202ENST00000418336 GADL1Q6ZQY3 521 aa24.85■■□□□ 1.57
PKNOX1-202ENST00000418336 ARHGAP39Q9C0H5 1083 aa24.85■■□□□ 1.57
PKNOX1-202ENST00000418336 CPA4Q9UI42 421 aa24.85■■□□□ 1.57
PKNOX1-202ENST00000418336 HPS5Q9UPZ3 1129 aa24.85■■□□□ 1.57
PKNOX1-202ENST00000418336 BRCA2P51587 3418 aa24.84■■□□□ 1.57
PKNOX1-202ENST00000418336 CYP2D7A0A087X1C5 515 aa24.84■■□□□ 1.57
PKNOX1-202ENST00000418336 GSG1L2A8MUP6 293 aa24.84■■□□□ 1.57
PKNOX1-202ENST00000418336 POLR3DP05423 398 aaPredicted RBP24.84■■□□□ 1.57
PKNOX1-202ENST00000418336 HMGCS2P54868 508 aa24.84■■□□□ 1.57
PKNOX1-202ENST00000418336 BACE1P56817 501 aa24.84■■□□□ 1.57
PKNOX1-202ENST00000418336 C12orf60Q5U649 245 aa24.84■■□□□ 1.57
PKNOX1-202ENST00000418336 SLC44A5Q8NCS7 719 aa24.84■■□□□ 1.57
PKNOX1-202ENST00000418336 LNPKQ9C0E8 428 aa24.84■■□□□ 1.57
PKNOX1-202ENST00000418336 EPB41L4AQ9HCS5 686 aaPredicted RBP24.84■■□□□ 1.57
PKNOX1-202ENST00000418336 ZFYP08048 801 aaPredicted RBP24.83■■□□□ 1.57
PKNOX1-202ENST00000418336 IRX6P78412 446 aaPredicted RBP24.83■■□□□ 1.57
PKNOX1-202ENST00000418336 LACTBP83111 547 aaPredicted RBP24.83■■□□□ 1.57
PKNOX1-202ENST00000418336 CTR9Q6PD62 1173 aa24.83■■□□□ 1.57
PKNOX1-202ENST00000418336 FBXO46Q6PJ61 603 aaPredicted RBP24.83■■□□□ 1.57
PKNOX1-202ENST00000418336 DYNLL2Q96FJ2 89 aa24.83■■□□□ 1.57
PKNOX1-202ENST00000418336 SEC62Q99442 399 aaKnown RBP24.83■■□□□ 1.57
PKNOX1-202ENST00000418336 TRIM17Q9Y577 477 aa24.83■■□□□ 1.57
PKNOX1-202ENST00000418336 SLC4A4Q9Y6R1 1079 aa24.83■■□□□ 1.57
PKNOX1-202ENST00000418336 FOXP2O15409 715 aa24.82■■□□□ 1.56
PKNOX1-202ENST00000418336 MTMR2Q13614 643 aa24.82■■□□□ 1.56
PKNOX1-202ENST00000418336 CERKLQ49MI3 558 aaPredicted RBP24.82■■□□□ 1.56
PKNOX1-202ENST00000418336 PARK7Q99497 189 aaKnown RBP24.82■■□□□ 1.56
PKNOX1-202ENST00000418336 TRIM34Q9BYJ4 488 aa24.82■■□□□ 1.56
PKNOX1-202ENST00000418336 AS3MTQ9HBK9 375 aa24.82■■□□□ 1.56
PKNOX1-202ENST00000418336 USP17L12C9JPN9 530 aa24.81■■□□□ 1.56
PKNOX1-202ENST00000418336 USP17L21D6R901 530 aa24.81■■□□□ 1.56
PKNOX1-202ENST00000418336 GPAA1O43292 621 aa24.81■■□□□ 1.56
PKNOX1-202ENST00000418336 ZMYM1Q5SVZ6 1142 aa24.81■■□□□ 1.56
PKNOX1-202ENST00000418336 CHD1LQ86WJ1 897 aa24.81■■□□□ 1.56
PKNOX1-202ENST00000418336 TAOK2Q9UL54 1235 aa24.81■■□□□ 1.56
PKNOX1-202ENST00000418336 PTPN22Q9Y2R2 807 aa24.81■■□□□ 1.56
PKNOX1-202ENST00000418336 ABCB5Q2M3G0 1257 aa24.8■■□□□ 1.56
PKNOX1-202ENST00000418336 B4GALNT3Q6L9W6 998 aa24.8■■□□□ 1.56
PKNOX1-202ENST00000418336 PLEKHM2Q8IWE5 1019 aa24.8■■□□□ 1.56
PKNOX1-202ENST00000418336 OSBPL3Q9H4L5 887 aa24.8■■□□□ 1.56
PKNOX1-202ENST00000418336 EMILIN3Q9NT22 766 aa24.8■■□□□ 1.56
PKNOX1-202ENST00000418336 GREB1LQ9C091 1923 aaPredicted RBP24.79■■□□□ 1.56
PKNOX1-202ENST00000418336 CCDC85CA6NKD9 419 aa24.79■■□□□ 1.56
PKNOX1-202ENST00000418336 SBK1Q52WX2 424 aa24.79■■□□□ 1.56
PKNOX1-202ENST00000418336 POTEEQ6S8J3 1075 aa24.79■■□□□ 1.56
PKNOX1-202ENST00000418336 C16orf86Q6ZW13 317 aa24.79■■□□□ 1.56
PKNOX1-202ENST00000418336 EFCC1Q9HA90 598 aa24.79■■□□□ 1.56
PKNOX1-202ENST00000418336 ROBO3Q96MS0 1386 aa24.79■■□□□ 1.56
PKNOX1-202ENST00000418336 C19orf81C9J6K1 198 aa24.78■■□□□ 1.56
PKNOX1-202ENST00000418336 USP17L10C9JJH3 530 aa24.78■■□□□ 1.56
PKNOX1-202ENST00000418336 HOXA7P31268 230 aaPredicted RBP24.78■■□□□ 1.56
PKNOX1-202ENST00000418336 GIMAP6Q6P9H5 292 aa24.78■■□□□ 1.56
PKNOX1-202ENST00000418336 SIAH1Q8IUQ4 282 aa24.78■■□□□ 1.56
PKNOX1-202ENST00000418336 ACER1Q8TDN7 264 aa24.78■■□□□ 1.56
PKNOX1-202ENST00000418336 TRIM47Q96LD4 638 aa24.78■■□□□ 1.56
PKNOX1-202ENST00000418336 C12orf42Q96LP6 360 aa24.78■■□□□ 1.56
PKNOX1-202ENST00000418336 FSD1Q9BTV5 496 aa24.78■■□□□ 1.56
PKNOX1-202ENST00000418336 SWAP70Q9UH65 585 aa24.78■■□□□ 1.56
PKNOX1-202ENST00000418336 MGAMO43451 1857 aa24.77■■□□□ 1.56
PKNOX1-202ENST00000418336 MYH8P13535 1937 aa24.77■■□□□ 1.56
PKNOX1-202ENST00000418336 SEPT2Q15019 361 aa24.77■■□□□ 1.56
PKNOX1-202ENST00000418336 EVI5LQ96CN4 794 aa24.77■■□□□ 1.56
PKNOX1-202ENST00000418336 A0A1W2PRG0 241 aa24.76■■□□□ 1.55
PKNOX1-202ENST00000418336 AKR1B1P15121 316 aa24.76■■□□□ 1.55
PKNOX1-202ENST00000418336 CDK8P49336 464 aa24.76■■□□□ 1.55
PKNOX1-202ENST00000418336 ASCC2Q9H1I8 757 aaPredicted RBP24.76■■□□□ 1.55
PKNOX1-202ENST00000418336 ARPP21Q9UBL0 812 aaPredicted RBP24.76■■□□□ 1.55
PKNOX1-202ENST00000418336 PDE4AP27815 886 aa24.75■■□□□ 1.55
PKNOX1-202ENST00000418336 RGS19P49795 217 aa24.75■■□□□ 1.55
PKNOX1-202ENST00000418336 KIAA1683Q9H0B3 1180 aa24.75■■□□□ 1.55
PKNOX1-202ENST00000418336 PATL2C9JE40 543 aaKnown RBP24.74■■□□□ 1.55
PKNOX1-202ENST00000418336 RAB3GAP1Q15042 981 aa24.74■■□□□ 1.55
PKNOX1-202ENST00000418336 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms