RNA–Protein interactions for RNA: ENST00000412157.2

SNRNP35-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best) BASIC

Gene SNRNP35, Length 1,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-202ENST00000412157 MICU3Q86XE3 530 aa13.59□□□□□ -0.23
SNRNP35-202ENST00000412157 NSUN7Q8NE18 718 aaKnown RBP13.59□□□□□ -0.23
SNRNP35-202ENST00000412157 SMARCC2Q8TAQ2 1214 aa13.59□□□□□ -0.23
SNRNP35-202ENST00000412157 KLRG1Q96E93 195 aa13.59□□□□□ -0.23
SNRNP35-202ENST00000412157 GMLQ99445 158 aa13.59□□□□□ -0.23
SNRNP35-202ENST00000412157 NCOA5Q9HCD5 579 aaKnown RBP13.59□□□□□ -0.23
SNRNP35-202ENST00000412157 DDX4Q9NQI0 724 aaKnown RBP13.59□□□□□ -0.23
SNRNP35-202ENST00000412157 COL2A1P02458 1487 aaPredicted RBP13.59□□□□□ -0.23
SNRNP35-202ENST00000412157 NID2Q14112 1375 aa13.58□□□□□ -0.23
SNRNP35-202ENST00000412157 GOLGA6L22H0YM25 854 aa13.58□□□□□ -0.24
SNRNP35-202ENST00000412157 JAK2O60674 1132 aa13.58□□□□□ -0.24
SNRNP35-202ENST00000412157 NPM3O75607 178 aaKnown RBP13.58□□□□□ -0.24
SNRNP35-202ENST00000412157 TSPY3P0CV98 308 aa13.58□□□□□ -0.24
SNRNP35-202ENST00000412157 TSPY8P0CW00 308 aa13.58□□□□□ -0.24
SNRNP35-202ENST00000412157 SYT1P21579 422 aa13.58□□□□□ -0.24
SNRNP35-202ENST00000412157 RPS12P25398 132 aaKnown RBP13.58□□□□□ -0.24
SNRNP35-202ENST00000412157 CDK8P49336 464 aa13.58□□□□□ -0.24
SNRNP35-202ENST00000412157 MMP14P50281 582 aa13.58□□□□□ -0.24
SNRNP35-202ENST00000412157 RCAN1P53805 252 aa13.58□□□□□ -0.24
SNRNP35-202ENST00000412157 TFAP4Q01664 338 aa13.58□□□□□ -0.24
SNRNP35-202ENST00000412157 PKP1Q13835 747 aa13.58□□□□□ -0.24
SNRNP35-202ENST00000412157 SEC23AQ15436 765 aa13.58□□□□□ -0.24
SNRNP35-202ENST00000412157 LARP1BQ659C4 914 aaKnown RBP13.58□□□□□ -0.24
SNRNP35-202ENST00000412157 RAB11FIP4Q86YS3 637 aa13.58□□□□□ -0.24
SNRNP35-202ENST00000412157 IDI2Q9BXS1 227 aa13.58□□□□□ -0.24
SNRNP35-202ENST00000412157 DHX36Q9H2U1 1008 aaKnown RBP13.58□□□□□ -0.24
SNRNP35-202ENST00000412157 RRAGCQ9HB90 399 aa13.58□□□□□ -0.24
SNRNP35-202ENST00000412157 SWAP70Q9UH65 585 aa13.58□□□□□ -0.24
SNRNP35-202ENST00000412157 HPS5Q9UPZ3 1129 aa13.58□□□□□ -0.24
SNRNP35-202ENST00000412157 ZBTB12Q9Y330 459 aaPredicted RBP13.58□□□□□ -0.24
SNRNP35-202ENST00000412157 GREB1LQ9C091 1923 aaPredicted RBP13.58□□□□□ -0.24
SNRNP35-202ENST00000412157 VPS37CA5D8V6 355 aaPredicted RBP13.57□□□□□ -0.24
SNRNP35-202ENST00000412157 DDX11L8A8MPP1 907 aa13.57□□□□□ -0.24
SNRNP35-202ENST00000412157 ENTPD3O75355 529 aa13.57□□□□□ -0.24
SNRNP35-202ENST00000412157 CALM1P0DP23 149 aa13.57□□□□□ -0.24
SNRNP35-202ENST00000412157 CALM2P0DP24 149 aa13.57□□□□□ -0.24
SNRNP35-202ENST00000412157 CALM3P0DP25 149 aa13.57□□□□□ -0.24
SNRNP35-202ENST00000412157 PTMSP20962 102 aa13.57□□□□□ -0.24
SNRNP35-202ENST00000412157 FSTL1Q12841 308 aa13.57□□□□□ -0.24
SNRNP35-202ENST00000412157 RTN1Q16799 776 aa13.57□□□□□ -0.24
SNRNP35-202ENST00000412157 FAM47AQ5JRC9 791 aa13.57□□□□□ -0.24
SNRNP35-202ENST00000412157 FOXD4L5Q5VV16 416 aaPredicted RBP13.57□□□□□ -0.24
SNRNP35-202ENST00000412157 CATIPQ7Z7H3 387 aa13.57□□□□□ -0.24
SNRNP35-202ENST00000412157 ZNF654Q8IZM8 581 aa13.57□□□□□ -0.24
SNRNP35-202ENST00000412157 ENAHQ8N8S7 591 aaPredicted RBP13.57□□□□□ -0.24
SNRNP35-202ENST00000412157 SLC44A5Q8NCS7 719 aa13.57□□□□□ -0.24
SNRNP35-202ENST00000412157 FOXD4L4Q8WXT5 416 aaPredicted RBP13.57□□□□□ -0.24
SNRNP35-202ENST00000412157 DDX11Q96FC9 970 aa13.57□□□□□ -0.24
SNRNP35-202ENST00000412157 TRIM34Q9BYJ4 488 aa13.57□□□□□ -0.24
SNRNP35-202ENST00000412157 TDRD3Q9H7E2 651 aaKnown RBP13.57□□□□□ -0.24
SNRNP35-202ENST00000412157 SENP2Q9HC62 589 aa13.57□□□□□ -0.24
SNRNP35-202ENST00000412157 PCDHAC2Q9Y5I4 1007 aa13.57□□□□□ -0.24
SNRNP35-202ENST00000412157 CCDC196A0A1B0GTZ2 297 aa13.56□□□□□ -0.24
SNRNP35-202ENST00000412157 SPDYE2BA6NHP3 402 aa13.56□□□□□ -0.24
SNRNP35-202ENST00000412157 MYO1BO43795 1136 aa13.56□□□□□ -0.24
SNRNP35-202ENST00000412157 DDAH1O94760 285 aa13.56□□□□□ -0.24
SNRNP35-202ENST00000412157 SPDYE6P0CI01 402 aa13.56□□□□□ -0.24
SNRNP35-202ENST00000412157 ZSCAN22P10073 491 aaPredicted RBP13.56□□□□□ -0.24
SNRNP35-202ENST00000412157 RASA1P20936 1047 aa13.56□□□□□ -0.24
SNRNP35-202ENST00000412157 MCM4P33991 863 aa13.56□□□□□ -0.24
SNRNP35-202ENST00000412157 CACNB3P54284 484 aa13.56□□□□□ -0.24
SNRNP35-202ENST00000412157 NFIAQ12857 509 aa13.56□□□□□ -0.24
SNRNP35-202ENST00000412157 PPP2R5BQ15173 497 aa13.56□□□□□ -0.24
SNRNP35-202ENST00000412157 COL13A1Q5TAT6 717 aaPredicted RBP13.56□□□□□ -0.24
SNRNP35-202ENST00000412157 ZSCAN29Q8IWY8 852 aaPredicted RBP13.56□□□□□ -0.24
SNRNP35-202ENST00000412157 CRACR2BQ8N4Y2 399 aaPredicted RBP13.56□□□□□ -0.24
SNRNP35-202ENST00000412157 NUP133Q8WUM0 1156 aa13.56□□□□□ -0.24
SNRNP35-202ENST00000412157 MYL10Q9BUA6 226 aa13.56□□□□□ -0.24
SNRNP35-202ENST00000412157 EHD4Q9H223 541 aa13.56□□□□□ -0.24
SNRNP35-202ENST00000412157 SERPINB13Q9UIV8 391 aa13.56□□□□□ -0.24
SNRNP35-202ENST00000412157 TAOK2Q9UL54 1235 aa13.56□□□□□ -0.24
SNRNP35-202ENST00000412157 ZDHHC9Q9Y397 364 aa13.56□□□□□ -0.24
SNRNP35-202ENST00000412157 ATP6V1DQ9Y5K8 247 aa13.56□□□□□ -0.24
SNRNP35-202ENST00000412157 H3BQV1 296 aa13.55□□□□□ -0.24
SNRNP35-202ENST00000412157 CTDNEP1O95476 244 aa13.55□□□□□ -0.24
SNRNP35-202ENST00000412157 F13A1P00488 732 aa13.55□□□□□ -0.24
SNRNP35-202ENST00000412157 RXRAP19793 462 aa13.55□□□□□ -0.24
SNRNP35-202ENST00000412157 TCP10Q12799 353 aa13.55□□□□□ -0.24
SNRNP35-202ENST00000412157 CLEC17AQ6ZS10 378 aa13.55□□□□□ -0.24
SNRNP35-202ENST00000412157 DGKHQ86XP1 1220 aa13.55□□□□□ -0.24
SNRNP35-202ENST00000412157 CCDC144CPQ8IYA2 1237 aa13.55□□□□□ -0.24
SNRNP35-202ENST00000412157 MTMR14Q8NCE2 650 aa13.55□□□□□ -0.24
SNRNP35-202ENST00000412157 SMC1BQ8NDV3 1235 aa13.55□□□□□ -0.24
SNRNP35-202ENST00000412157 NEDD1Q8NHV4 660 aa13.55□□□□□ -0.24
SNRNP35-202ENST00000412157 PRMT6Q96LA8 375 aaPredicted RBP13.55□□□□□ -0.24
SNRNP35-202ENST00000412157 KAT14Q9H8E8 782 aa13.55□□□□□ -0.24
SNRNP35-202ENST00000412157 TCP11L1Q9NUJ3 509 aa13.55□□□□□ -0.24
SNRNP35-202ENST00000412157 RBM28Q9NW13 759 aaKnown RBP13.55□□□□□ -0.24
SNRNP35-202ENST00000412157 FAM198AQ9UFP1 575 aa13.55□□□□□ -0.24
SNRNP35-202ENST00000412157 GJA3Q9Y6H8 435 aa13.55□□□□□ -0.24
SNRNP35-202ENST00000412157 PLIN4Q96Q06 1357 aa13.55□□□□□ -0.24
SNRNP35-202ENST00000412157 FZD9O00144 591 aa13.54□□□□□ -0.24
SNRNP35-202ENST00000412157 DTNBO60941 627 aa13.54□□□□□ -0.24
SNRNP35-202ENST00000412157 BAG4O95429 457 aaKnown RBP13.54□□□□□ -0.24
SNRNP35-202ENST00000412157 LMNB1P20700 586 aa13.54□□□□□ -0.24
SNRNP35-202ENST00000412157 GABPAQ06546 454 aa13.54□□□□□ -0.24
SNRNP35-202ENST00000412157 TNS4Q8IZW8 715 aa13.54□□□□□ -0.24
SNRNP35-202ENST00000412157 ANP32EQ9BTT0 268 aa13.54□□□□□ -0.24
SNRNP35-202ENST00000412157 ORC3Q9UBD5 711 aaPredicted RBP13.54□□□□□ -0.24
SNRNP35-202ENST00000412157 ZNF70Q9UC06 446 aaPredicted RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms