RNA–Protein interactions for RNA: ENST00000411243.1

RNU4-61P-201, Transcript of RNA, U4 small nuclear 61, pseudogene, humanhuman

BASIC

Gene RNU4-61P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-61P-201ENST00000411243 NR0B2Q15466 257 aa4.69□□□□□ -1.66
RNU4-61P-201ENST00000411243 C8orf34Q49A92 452 aa4.69□□□□□ -1.66
RNU4-61P-201ENST00000411243 UBE2FQ969M7 185 aa4.69□□□□□ -1.66
RNU4-61P-201ENST00000411243 ZC3H12CQ9C0D7 883 aaKnown RBP4.69□□□□□ -1.66
RNU4-61P-201ENST00000411243 AMOTL2Q9Y2J4 779 aa4.69□□□□□ -1.66
RNU4-61P-201ENST00000411243 CNKSR3Q6P9H4 555 aa4.68□□□□□ -1.66
RNU4-61P-201ENST00000411243 TMEFF1Q8IYR6 380 aa4.68□□□□□ -1.66
RNU4-61P-201ENST00000411243 FAM200AQ8TCP9 573 aa4.68□□□□□ -1.66
RNU4-61P-201ENST00000411243 FITM1A5D6W6 292 aa4.67□□□□□ -1.66
RNU4-61P-201ENST00000411243 PRMT3O60678 531 aa4.67□□□□□ -1.66
RNU4-61P-201ENST00000411243 SRSF3P84103 164 aaKnown RBP4.67□□□□□ -1.66
RNU4-61P-201ENST00000411243 FGD1P98174 961 aa4.67□□□□□ -1.66
RNU4-61P-201ENST00000411243 ZC3H12AQ5D1E8 599 aaKnown RBP4.67□□□□□ -1.66
RNU4-61P-201ENST00000411243 TMPRSS7Q7RTY8 843 aa4.67□□□□□ -1.66
RNU4-61P-201ENST00000411243 FAM129CQ86XR2 697 aa4.67□□□□□ -1.66
RNU4-61P-201ENST00000411243 OXR1Q8N573 874 aa4.67□□□□□ -1.66
RNU4-61P-201ENST00000411243 MKNK1Q9BUB5 465 aa4.67□□□□□ -1.66
RNU4-61P-201ENST00000411243 LIN7BQ9HAP6 207 aa4.67□□□□□ -1.66
RNU4-61P-201ENST00000411243 FZD7O75084 574 aa4.66□□□□□ -1.66
RNU4-61P-201ENST00000411243 ITGB3P05106 788 aa4.66□□□□□ -1.66
RNU4-61P-201ENST00000411243 NTF4P34130 210 aa4.66□□□□□ -1.66
RNU4-61P-201ENST00000411243 KCNC1P48547 511 aa4.66□□□□□ -1.66
RNU4-61P-201ENST00000411243 KRTAP10-9P60411 292 aa4.66□□□□□ -1.66
RNU4-61P-201ENST00000411243 DNM1Q05193 864 aaKnown RBP4.66□□□□□ -1.66
RNU4-61P-201ENST00000411243 SFRP5Q5T4F7 317 aa4.66□□□□□ -1.66
RNU4-61P-201ENST00000411243 USP51Q70EK9 711 aa4.66□□□□□ -1.66
RNU4-61P-201ENST00000411243 UBE3DQ7Z6J8 389 aa4.66□□□□□ -1.66
RNU4-61P-201ENST00000411243 TTC16Q8NEE8 873 aa4.66□□□□□ -1.66
RNU4-61P-201ENST00000411243 POM121Q96HA1 1249 aa4.66□□□□□ -1.66
RNU4-61P-201ENST00000411243 FOXD3Q9UJU5 478 aaPredicted RBP4.66□□□□□ -1.66
RNU4-61P-201ENST00000411243 GSTP1P09211 210 aaKnown RBP4.65□□□□□ -1.67
RNU4-61P-201ENST00000411243 ZGLP1P0C6A0 271 aa4.65□□□□□ -1.67
RNU4-61P-201ENST00000411243 ITPKAP23677 461 aa4.65□□□□□ -1.67
RNU4-61P-201ENST00000411243 TTC9BQ8N6N2 239 aa4.65□□□□□ -1.67
RNU4-61P-201ENST00000411243 NECAB3Q96P71 396 aaPredicted RBP4.65□□□□□ -1.67
RNU4-61P-201ENST00000411243 CNTD2Q9H8S5 307 aa4.65□□□□□ -1.67
RNU4-61P-201ENST00000411243 VRTNQ9H8Y1 702 aa4.65□□□□□ -1.67
RNU4-61P-201ENST00000411243 SIRT5Q9NXA8 310 aa4.65□□□□□ -1.67
RNU4-61P-201ENST00000411243 ZSWIM5Q9P217 1185 aa4.65□□□□□ -1.67
RNU4-61P-201ENST00000411243 OR14I1A6ND48 311 aa4.64□□□□□ -1.67
RNU4-61P-201ENST00000411243 ATXN1P54253 815 aaKnown RBP4.64□□□□□ -1.67
RNU4-61P-201ENST00000411243 SLURP1P55000 103 aa4.64□□□□□ -1.67
RNU4-61P-201ENST00000411243 SNX17Q15036 470 aa4.64□□□□□ -1.67
RNU4-61P-201ENST00000411243 FERMT3Q86UX7 667 aa4.64□□□□□ -1.67
RNU4-61P-201ENST00000411243 SLITRK5O94991 958 aa4.63□□□□□ -1.67
RNU4-61P-201ENST00000411243 MZF1P28698 734 aaPredicted RBP4.63□□□□□ -1.67
RNU4-61P-201ENST00000411243 KRTAP5-11Q6L8G4 156 aa4.63□□□□□ -1.67
RNU4-61P-201ENST00000411243 ARMCX6Q7L4S7 300 aa4.63□□□□□ -1.67
RNU4-61P-201ENST00000411243 SHISA4Q96DD7 197 aa4.63□□□□□ -1.67
RNU4-61P-201ENST00000411243 PPP1R13LQ8WUF5 828 aa4.62□□□□□ -1.67
RNU4-61P-201ENST00000411243 PWWP2AQ96N64 755 aa4.62□□□□□ -1.67
RNU4-61P-201ENST00000411243 C8orf49Q96NF6 230 aa4.62□□□□□ -1.67
RNU4-61P-201ENST00000411243 RBM15Q96T37 977 aaKnown RBP eCLIP4.62□□□□□ -1.67
RNU4-61P-201ENST00000411243 C11orf21Q9P2W6 132 aa4.62□□□□□ -1.67
RNU4-61P-201ENST00000411243 GPR160Q9UJ42 338 aa4.62□□□□□ -1.67
RNU4-61P-201ENST00000411243 TPX2Q9ULW0 747 aaKnown RBP4.62□□□□□ -1.67
RNU4-61P-201ENST00000411243 FFAR3O14843 346 aa4.61□□□□□ -1.67
RNU4-61P-201ENST00000411243 CDR1P51861 262 aa4.61□□□□□ -1.67
RNU4-61P-201ENST00000411243 CAP1Q01518 475 aa4.61□□□□□ -1.67
RNU4-61P-201ENST00000411243 SMN1Q16637 294 aaKnown RBP4.61□□□□□ -1.67
RNU4-61P-201ENST00000411243 PDZD3Q86UT5 571 aa4.61□□□□□ -1.67
RNU4-61P-201ENST00000411243 MZB1Q8WU39 189 aa4.61□□□□□ -1.67
RNU4-61P-201ENST00000411243 USP40Q9NVE5 1235 aa4.61□□□□□ -1.67
RNU4-61P-201ENST00000411243 CXXC1Q9P0U4 656 aaPredicted RBP4.61□□□□□ -1.67
RNU4-61P-201ENST00000411243 ACIN1Q9UKV3 1341 aaKnown RBP4.61□□□□□ -1.67
RNU4-61P-201ENST00000411243 LRIG2O94898 1065 aa4.6□□□□□ -1.67
RNU4-61P-201ENST00000411243 VIPR1P32241 457 aa4.6□□□□□ -1.67
RNU4-61P-201ENST00000411243 PTPN12Q05209 780 aaKnown RBP4.6□□□□□ -1.67
RNU4-61P-201ENST00000411243 KLF10Q13118 480 aa4.6□□□□□ -1.67
RNU4-61P-201ENST00000411243 LRCH2Q5VUJ6 765 aa4.6□□□□□ -1.67
RNU4-61P-201ENST00000411243 SPRED1Q7Z699 444 aa4.6□□□□□ -1.67
RNU4-61P-201ENST00000411243 CREG2Q8IUH2 290 aa4.6□□□□□ -1.67
RNU4-61P-201ENST00000411243 POLR3DP05423 398 aaPredicted RBP4.59□□□□□ -1.67
RNU4-61P-201ENST00000411243 ADGRF1Q5T601 910 aa4.59□□□□□ -1.67
RNU4-61P-201ENST00000411243 SAMD11Q96NU1 681 aa4.59□□□□□ -1.67
RNU4-61P-201ENST00000411243 PPP1R12CQ9BZL4 782 aa4.59□□□□□ -1.67
RNU4-61P-201ENST00000411243 ZFYVE28Q9HCC9 887 aa4.59□□□□□ -1.67
RNU4-61P-201ENST00000411243 PLCB3Q01970 1234 aa4.58□□□□□ -1.68
RNU4-61P-201ENST00000411243 GAB4Q2WGN9 574 aa4.58□□□□□ -1.68
RNU4-61P-201ENST00000411243 RPS26P11Q5JNZ5 115 aaPredicted RBP4.58□□□□□ -1.68
RNU4-61P-201ENST00000411243 PPM1JQ5JR12 505 aa4.58□□□□□ -1.68
RNU4-61P-201ENST00000411243 IGDCC3Q8IVU1 814 aa4.58□□□□□ -1.68
RNU4-61P-201ENST00000411243 GALNT12Q8IXK2 581 aa4.58□□□□□ -1.68
RNU4-61P-201ENST00000411243 PIWIL2Q8TC59 973 aaKnown RBP4.58□□□□□ -1.68
RNU4-61P-201ENST00000411243 SH3RF3Q8TEJ3 882 aaPredicted RBP4.58□□□□□ -1.68
RNU4-61P-201ENST00000411243 INHBEP58166 350 aa4.57□□□□□ -1.68
RNU4-61P-201ENST00000411243 CHRNEQ04844 493 aa4.57□□□□□ -1.68
RNU4-61P-201ENST00000411243 TNK2Q07912 1038 aa4.57□□□□□ -1.68
RNU4-61P-201ENST00000411243 NT5DC1Q5TFE4 455 aa4.57□□□□□ -1.68
RNU4-61P-201ENST00000411243 DHX38Q92620 1227 aaKnown RBP4.57□□□□□ -1.68
RNU4-61P-201ENST00000411243 KCNB2Q92953 911 aa4.57□□□□□ -1.68
RNU4-61P-201ENST00000411243 GLMNQ92990 594 aa4.57□□□□□ -1.68
RNU4-61P-201ENST00000411243 DVL3Q92997 716 aaPredicted RBP4.57□□□□□ -1.68
RNU4-61P-201ENST00000411243 ZNF747Q9BV97 191 aa4.57□□□□□ -1.68
RNU4-61P-201ENST00000411243 ING1Q9UK53 422 aaPredicted RBP4.57□□□□□ -1.68
RNU4-61P-201ENST00000411243 CBX7O95931 251 aa4.56□□□□□ -1.68
RNU4-61P-201ENST00000411243 CNR2P34972 360 aa4.56□□□□□ -1.68
RNU4-61P-201ENST00000411243 KIR3DL1P43629 444 aa4.56□□□□□ -1.68
RNU4-61P-201ENST00000411243 GALK1P51570 392 aa4.56□□□□□ -1.68
RNU4-61P-201ENST00000411243 YBX1P67809 324 aaKnown RBP4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms