RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 TTC6Q86TZ1 520 aa4.19□□□□□ -1.74
RNU6-1140P-201ENST00000410517 TMEM151BQ8IW70 566 aa4.19□□□□□ -1.74
RNU6-1140P-201ENST00000410517 FEZF2Q8TBJ5 459 aa4.19□□□□□ -1.74
RNU6-1140P-201ENST00000410517 SNX29Q8TEQ0 813 aa4.19□□□□□ -1.74
RNU6-1140P-201ENST00000410517 GIPC2Q8TF65 315 aa4.19□□□□□ -1.74
RNU6-1140P-201ENST00000410517 MYLIPQ8WY64 445 aa4.19□□□□□ -1.74
RNU6-1140P-201ENST00000410517 HSPA12BQ96MM6 686 aa4.19□□□□□ -1.74
RNU6-1140P-201ENST00000410517 ALPK1Q96QP1 1244 aa4.19□□□□□ -1.74
RNU6-1140P-201ENST00000410517 CCDC86Q9H6F5 360 aaKnown RBP4.19□□□□□ -1.74
RNU6-1140P-201ENST00000410517 SEMA3GQ9NS98 782 aa4.19□□□□□ -1.74
RNU6-1140P-201ENST00000410517 TNFRSF21O75509 655 aa4.18□□□□□ -1.74
RNU6-1140P-201ENST00000410517 B3GALT4O96024 378 aa4.18□□□□□ -1.74
RNU6-1140P-201ENST00000410517 GRIA4P48058 902 aa4.18□□□□□ -1.74
RNU6-1140P-201ENST00000410517 MTMR3Q13615 1198 aa4.18□□□□□ -1.74
RNU6-1140P-201ENST00000410517 ISL2Q96A47 359 aa4.18□□□□□ -1.74
RNU6-1140P-201ENST00000410517 FAM129BQ96TA1 746 aa4.18□□□□□ -1.74
RNU6-1140P-201ENST00000410517 GPR20Q99678 358 aa4.18□□□□□ -1.74
RNU6-1140P-201ENST00000410517 MCOLN1Q9GZU1 580 aa4.18□□□□□ -1.74
RNU6-1140P-201ENST00000410517 PPP4R2Q9NY27 417 aa4.18□□□□□ -1.74
RNU6-1140P-201ENST00000410517 SLAMF8Q9P0V8 285 aa4.18□□□□□ -1.74
RNU6-1140P-201ENST00000410517 POLIQ9UNA4 740 aa4.18□□□□□ -1.74
RNU6-1140P-201ENST00000410517 SPG7Q9UQ90 795 aa4.18□□□□□ -1.74
RNU6-1140P-201ENST00000410517 MYRFQ9Y2G1 1151 aa4.18□□□□□ -1.74
RNU6-1140P-201ENST00000410517 GIPC1O14908 333 aa4.17□□□□□ -1.74
RNU6-1140P-201ENST00000410517 TREHO43280 583 aa4.17□□□□□ -1.74
RNU6-1140P-201ENST00000410517 CPNE3O75131 537 aaKnown RBP4.17□□□□□ -1.74
RNU6-1140P-201ENST00000410517 PRPF40AO75400 957 aaKnown RBP4.17□□□□□ -1.74
RNU6-1140P-201ENST00000410517 NEFMP07197 916 aa4.17□□□□□ -1.74
RNU6-1140P-201ENST00000410517 VAMP1P23763 118 aa4.17□□□□□ -1.74
RNU6-1140P-201ENST00000410517 MAPK8P45983 427 aa4.17□□□□□ -1.74
RNU6-1140P-201ENST00000410517 ERVFC1P60507 584 aa4.17□□□□□ -1.74
RNU6-1140P-201ENST00000410517 PLP2Q04941 152 aa4.17□□□□□ -1.74
RNU6-1140P-201ENST00000410517 FMR1Q06787 632 aaKnown RBP eCLIP4.17□□□□□ -1.74
RNU6-1140P-201ENST00000410517 EFEMP1Q12805 493 aa4.17□□□□□ -1.74
RNU6-1140P-201ENST00000410517 AP3B2Q13367 1082 aa4.17□□□□□ -1.74
RNU6-1140P-201ENST00000410517 CDKAL1Q5VV42 579 aa4.17□□□□□ -1.74
RNU6-1140P-201ENST00000410517 DIEXFQ68CQ4 756 aaKnown RBP4.17□□□□□ -1.74
RNU6-1140P-201ENST00000410517 TMC7Q7Z402 723 aa4.17□□□□□ -1.74
RNU6-1140P-201ENST00000410517 ZNF605Q86T29 641 aa4.17□□□□□ -1.74
RNU6-1140P-201ENST00000410517 CCNJLQ8IV13 435 aa4.17□□□□□ -1.74
RNU6-1140P-201ENST00000410517 GJD3Q8N144 294 aa4.17□□□□□ -1.74
RNU6-1140P-201ENST00000410517 NLRP2Q9NX02 1062 aa4.17□□□□□ -1.74
RNU6-1140P-201ENST00000410517 FOXD3Q9UJU5 478 aaPredicted RBP4.17□□□□□ -1.74
RNU6-1140P-201ENST00000410517 FAM155AB1AL88 458 aaPredicted RBP4.16□□□□□ -1.74
RNU6-1140P-201ENST00000410517 ZNF862O60290 1169 aa4.16□□□□□ -1.74
RNU6-1140P-201ENST00000410517 FZD6O60353 706 aa4.16□□□□□ -1.74
RNU6-1140P-201ENST00000410517 SEMA7AO75326 666 aa4.16□□□□□ -1.74
RNU6-1140P-201ENST00000410517 POLR3DP05423 398 aaPredicted RBP4.16□□□□□ -1.74
RNU6-1140P-201ENST00000410517 LDHBP07195 334 aaKnown RBP4.16□□□□□ -1.74
RNU6-1140P-201ENST00000410517 HNRNPUQ00839 825 aaKnown RBP eCLIP4.16□□□□□ -1.74
RNU6-1140P-201ENST00000410517 SRCIN1Q9C0H9 1055 aa4.16□□□□□ -1.74
RNU6-1140P-201ENST00000410517 LIN7BQ9HAP6 207 aa4.16□□□□□ -1.74
RNU6-1140P-201ENST00000410517 PRDM10Q9NQV6 1147 aa4.16□□□□□ -1.74
RNU6-1140P-201ENST00000410517 MYOCOSA0A1B0GUC4 107 aa4.15□□□□□ -1.75
RNU6-1140P-201ENST00000410517 H3BS24 57 aa4.15□□□□□ -1.75
RNU6-1140P-201ENST00000410517 HK2P52789 917 aa4.15□□□□□ -1.75
RNU6-1140P-201ENST00000410517 ZXDAP98168 799 aa4.15□□□□□ -1.75
RNU6-1140P-201ENST00000410517 PSMD2Q13200 908 aa4.15□□□□□ -1.75
RNU6-1140P-201ENST00000410517 SSPNQ14714 243 aa4.15□□□□□ -1.75
RNU6-1140P-201ENST00000410517 KIF4BQ2VIQ3 1234 aa4.15□□□□□ -1.75
RNU6-1140P-201ENST00000410517 MRRFQ96E11 262 aaKnown RBP4.15□□□□□ -1.75
RNU6-1140P-201ENST00000410517 SGPP1Q9BX95 441 aa4.15□□□□□ -1.75
RNU6-1140P-201ENST00000410517 FOXQ1Q9C009 403 aa4.15□□□□□ -1.75
RNU6-1140P-201ENST00000410517 ADAM7Q9H2U9 754 aa4.15□□□□□ -1.75
RNU6-1140P-201ENST00000410517 SRRDQ9UH36 339 aa4.15□□□□□ -1.75
RNU6-1140P-201ENST00000410517 TRAK1Q9UPV9 953 aa4.15□□□□□ -1.75
RNU6-1140P-201ENST00000410517 PCDHGC5Q9Y5F6 944 aa4.15□□□□□ -1.75
RNU6-1140P-201ENST00000410517 CECR2Q9BXF3 1484 aa4.15□□□□□ -1.75
RNU6-1140P-201ENST00000410517 DNAJC25-GNG10A0A024R161 153 aa4.14□□□□□ -1.75
RNU6-1140P-201ENST00000410517 PNMA6FA0A0J9YX94 578 aa4.14□□□□□ -1.75
RNU6-1140P-201ENST00000410517 A0A1W2PP55 124 aa4.14□□□□□ -1.75
RNU6-1140P-201ENST00000410517 SORBS3O60504 671 aa4.14□□□□□ -1.75
RNU6-1140P-201ENST00000410517 ZNF16P17020 682 aaPredicted RBP4.14□□□□□ -1.75
RNU6-1140P-201ENST00000410517 TRHRP34981 398 aaPredicted RBP4.14□□□□□ -1.75
RNU6-1140P-201ENST00000410517 PANK1Q8TE04 598 aa4.14□□□□□ -1.75
RNU6-1140P-201ENST00000410517 TCF12Q99081 682 aa4.14□□□□□ -1.75
RNU6-1140P-201ENST00000410517 BDH2Q9BUT1 245 aa4.14□□□□□ -1.75
RNU6-1140P-201ENST00000410517 RNF32Q9H0A6 362 aa4.14□□□□□ -1.75
RNU6-1140P-201ENST00000410517 PRDM5Q9NQX1 630 aaPredicted RBP4.14□□□□□ -1.75
RNU6-1140P-201ENST00000410517 CCDC87Q9NVE4 849 aa4.14□□□□□ -1.75
RNU6-1140P-201ENST00000410517 PEX10O60683 326 aa4.13□□□□□ -1.75
RNU6-1140P-201ENST00000410517 FSHBP01225 129 aa4.13□□□□□ -1.75
RNU6-1140P-201ENST00000410517 P4HBP07237 508 aaKnown RBP4.13□□□□□ -1.75
RNU6-1140P-201ENST00000410517 EIF4BP23588 611 aaKnown RBP4.13□□□□□ -1.75
RNU6-1140P-201ENST00000410517 GNA15P30679 374 aa4.13□□□□□ -1.75
RNU6-1140P-201ENST00000410517 ENOX2Q16206 610 aaKnown RBP4.13□□□□□ -1.75
RNU6-1140P-201ENST00000410517 RALGPS1Q5JS13 557 aa4.13□□□□□ -1.75
RNU6-1140P-201ENST00000410517 SYT8Q8NBV8 401 aa4.13□□□□□ -1.75
RNU6-1140P-201ENST00000410517 TEPSINQ96N21 525 aa4.13□□□□□ -1.75
RNU6-1140P-201ENST00000410517 NIF3L1Q9GZT8 377 aa4.13□□□□□ -1.75
RNU6-1140P-201ENST00000410517 ZNF576Q9H609 170 aa4.13□□□□□ -1.75
RNU6-1140P-201ENST00000410517 GCM1Q9NP62 436 aa4.13□□□□□ -1.75
RNU6-1140P-201ENST00000410517 VTI1BQ9UEU0 232 aa4.13□□□□□ -1.75
RNU6-1140P-201ENST00000410517 TEX51A0A1B0GUA7 166 aa4.12□□□□□ -1.75
RNU6-1140P-201ENST00000410517 PRR33A8MZF0 331 aa4.12□□□□□ -1.75
RNU6-1140P-201ENST00000410517 GRIN3BO60391 1043 aa4.12□□□□□ -1.75
RNU6-1140P-201ENST00000410517 EOMESO95936 686 aa4.12□□□□□ -1.75
RNU6-1140P-201ENST00000410517 PI3P19957 117 aa4.12□□□□□ -1.75
RNU6-1140P-201ENST00000410517 AFF3P51826 1226 aaKnown RBP4.12□□□□□ -1.75
RNU6-1140P-201ENST00000410517 DSC3Q14574 896 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms