RNA–Protein interactions for RNA: ENST00000405010.7

HDAC9-202, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 4,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-202ENST00000405010 BAIAP2L1Q9UHR4 511 aa8.29□□□□□ -1.08
HDAC9-202ENST00000405010 ODF2LQ9ULJ1 636 aa8.29□□□□□ -1.08
HDAC9-202ENST00000405010 GLI2P10070 1586 aa8.29□□□□□ -1.08
HDAC9-202ENST00000405010 EFCAB6Q5THR3 1501 aa8.29□□□□□ -1.08
HDAC9-202ENST00000405010 NEURL1BA8MQ27 555 aa8.29□□□□□ -1.08
HDAC9-202ENST00000405010 EYA2O00167 538 aa8.29□□□□□ -1.08
HDAC9-202ENST00000405010 ZRANB2O95218 330 aaKnown RBP eCLIP8.29□□□□□ -1.08
HDAC9-202ENST00000405010 TNNC1P63316 161 aa8.29□□□□□ -1.08
HDAC9-202ENST00000405010 CCDC40Q4G0X9 1142 aa8.29□□□□□ -1.08
HDAC9-202ENST00000405010 PNMA8AQ86V59 439 aaPredicted RBP8.29□□□□□ -1.08
HDAC9-202ENST00000405010 FMNL3Q8IVF7 1028 aa8.29□□□□□ -1.08
HDAC9-202ENST00000405010 REXO1L1PQ8IX06 675 aa8.29□□□□□ -1.08
HDAC9-202ENST00000405010 AIFM3Q96NN9 605 aa8.29□□□□□ -1.08
HDAC9-202ENST00000405010 SUGCTQ9HAC7 445 aa8.29□□□□□ -1.08
HDAC9-202ENST00000405010 LCMT1Q9UIC8 334 aa8.29□□□□□ -1.08
HDAC9-202ENST00000405010 ZFYVE16Q7Z3T8 1539 aa8.29□□□□□ -1.08
HDAC9-202ENST00000405010 N4BP1O75113 896 aaKnown RBP8.28□□□□□ -1.08
HDAC9-202ENST00000405010 DEXIO95424 95 aa8.28□□□□□ -1.08
HDAC9-202ENST00000405010 FGAP02671 866 aa8.28□□□□□ -1.08
HDAC9-202ENST00000405010 CORO7P57737 925 aa8.28□□□□□ -1.08
HDAC9-202ENST00000405010 RNASE9P60153 205 aaKnown RBP8.28□□□□□ -1.08
HDAC9-202ENST00000405010 ASIC1P78348 528 aa8.28□□□□□ -1.08
HDAC9-202ENST00000405010 IFT88Q13099 833 aa8.28□□□□□ -1.08
HDAC9-202ENST00000405010 PRPF4BQ13523 1007 aaKnown RBP8.28□□□□□ -1.08
HDAC9-202ENST00000405010 TSGA10IPQ3SY00 556 aa8.28□□□□□ -1.08
HDAC9-202ENST00000405010 SOGA3Q5TF21 947 aa8.28□□□□□ -1.08
HDAC9-202ENST00000405010 LRCH2Q5VUJ6 765 aa8.28□□□□□ -1.08
HDAC9-202ENST00000405010 ARHGEF25Q86VW2 580 aa8.28□□□□□ -1.08
HDAC9-202ENST00000405010 NELFBQ8WX92 580 aa8.28□□□□□ -1.08
HDAC9-202ENST00000405010 BLZF1Q9H2G9 400 aa8.28□□□□□ -1.08
HDAC9-202ENST00000405010 COPRSQ9NQ92 184 aa8.28□□□□□ -1.08
HDAC9-202ENST00000405010 CHD1O14646 1710 aa8.28□□□□□ -1.08
HDAC9-202ENST00000405010 KCNJ18B7U540 433 aa8.28□□□□□ -1.08
HDAC9-202ENST00000405010 H3BQF6 201 aa8.28□□□□□ -1.08
HDAC9-202ENST00000405010 MCM7P33993 719 aa8.28□□□□□ -1.08
HDAC9-202ENST00000405010 ST3GAL1Q11201 340 aa8.28□□□□□ -1.08
HDAC9-202ENST00000405010 KCNJ12Q14500 433 aa8.28□□□□□ -1.08
HDAC9-202ENST00000405010 SEPT11Q9NVA2 429 aaKnown RBP8.28□□□□□ -1.08
HDAC9-202ENST00000405010 GEMIN8Q9NWZ8 242 aaKnown RBP8.28□□□□□ -1.08
HDAC9-202ENST00000405010 TLDC2A0PJX2 215 aa8.28□□□□□ -1.08
HDAC9-202ENST00000405010 GCOM1H8Y6P7 765 aaPredicted RBP8.28□□□□□ -1.08
HDAC9-202ENST00000405010 TULP2O00295 520 aa8.28□□□□□ -1.08
HDAC9-202ENST00000405010 BUB1BO60566 1050 aaPredicted RBP8.28□□□□□ -1.08
HDAC9-202ENST00000405010 MFAP3LO75121 409 aa8.28□□□□□ -1.08
HDAC9-202ENST00000405010 SASH3O75995 380 aa8.28□□□□□ -1.08
HDAC9-202ENST00000405010 MYZAPP0CAP1 466 aa8.28□□□□□ -1.08
HDAC9-202ENST00000405010 AMPD3Q01432 767 aa8.28□□□□□ -1.08
HDAC9-202ENST00000405010 ZMYM1Q5SVZ6 1142 aa8.28□□□□□ -1.08
HDAC9-202ENST00000405010 VPS36Q86VN1 386 aa8.28□□□□□ -1.08
HDAC9-202ENST00000405010 GPIHBP1Q8IV16 184 aa8.28□□□□□ -1.08
HDAC9-202ENST00000405010 CXorf56Q9H5V9 222 aa8.28□□□□□ -1.08
HDAC9-202ENST00000405010 ZMYM6O95789 1325 aa8.28□□□□□ -1.08
HDAC9-202ENST00000405010 IGSF1Q8N6C5 1336 aa8.28□□□□□ -1.08
HDAC9-202ENST00000405010 PLEKHG3A1L390 1219 aa8.27□□□□□ -1.08
HDAC9-202ENST00000405010 COBLO75128 1261 aa8.27□□□□□ -1.08
HDAC9-202ENST00000405010 MAGEA1P43355 309 aa8.27□□□□□ -1.08
HDAC9-202ENST00000405010 GUCY2FP51841 1108 aa8.27□□□□□ -1.08
HDAC9-202ENST00000405010 ARID5AQ03989 594 aa8.27□□□□□ -1.08
HDAC9-202ENST00000405010 MORC3Q14149 939 aa8.27□□□□□ -1.08
HDAC9-202ENST00000405010 PPP2R5AQ15172 486 aa8.27□□□□□ -1.08
HDAC9-202ENST00000405010 SMYD4Q8IYR2 804 aaPredicted RBP8.27□□□□□ -1.08
HDAC9-202ENST00000405010 CSGALNACT2Q8N6G5 542 aa8.27□□□□□ -1.08
HDAC9-202ENST00000405010 UBLCP1Q8WVY7 318 aaPredicted RBP8.27□□□□□ -1.08
HDAC9-202ENST00000405010 ZNF594Q96JF6 807 aaPredicted RBP8.27□□□□□ -1.08
HDAC9-202ENST00000405010 PLIN2Q99541 437 aa8.27□□□□□ -1.08
HDAC9-202ENST00000405010 SELENOSQ9BQE4 189 aa8.27□□□□□ -1.08
HDAC9-202ENST00000405010 NOC4LQ9BVI4 516 aaKnown RBP8.27□□□□□ -1.08
HDAC9-202ENST00000405010 YY1AP1Q9H869 796 aa8.27□□□□□ -1.08
HDAC9-202ENST00000405010 MYOM1P52179 1685 aa8.27□□□□□ -1.08
HDAC9-202ENST00000405010 KIAA1210Q9ULL0 1709 aa8.27□□□□□ -1.09
HDAC9-202ENST00000405010 RAD21O60216 631 aa8.27□□□□□ -1.09
HDAC9-202ENST00000405010 GGCXP38435 758 aa8.27□□□□□ -1.09
HDAC9-202ENST00000405010 COPB1P53618 953 aaKnown RBP8.27□□□□□ -1.09
HDAC9-202ENST00000405010 ZRSR2Q15696 482 aaKnown RBP8.27□□□□□ -1.09
HDAC9-202ENST00000405010 TRIM58Q8NG06 486 aa8.27□□□□□ -1.09
HDAC9-202ENST00000405010 NUP58Q9BVL2 599 aa8.27□□□□□ -1.09
HDAC9-202ENST00000405010 SELENOOQ9BVL4 669 aa8.27□□□□□ -1.09
HDAC9-202ENST00000405010 IFIH1Q9BYX4 1025 aaKnown RBP8.27□□□□□ -1.09
HDAC9-202ENST00000405010 NSRP1Q9H0G5 558 aaKnown RBP8.27□□□□□ -1.09
HDAC9-202ENST00000405010 USP42Q9H9J4 1324 aaKnown RBP8.27□□□□□ -1.09
HDAC9-202ENST00000405010 BICDL2A1A5D9 508 aa8.27□□□□□ -1.09
HDAC9-202ENST00000405010 ANKRD18BA2A2Z9 1011 aa8.27□□□□□ -1.09
HDAC9-202ENST00000405010 PDCLQ13371 301 aa8.27□□□□□ -1.09
HDAC9-202ENST00000405010 E2F5Q15329 346 aa8.27□□□□□ -1.09
HDAC9-202ENST00000405010 NFATC2IPQ8NCF5 419 aa8.27□□□□□ -1.09
HDAC9-202ENST00000405010 ESR2Q92731 530 aa8.27□□□□□ -1.09
HDAC9-202ENST00000405010 N4BP2L2Q92802 583 aaPredicted RBP8.27□□□□□ -1.09
HDAC9-202ENST00000405010 MRPL44Q9H9J2 332 aaKnown RBP8.27□□□□□ -1.09
HDAC9-202ENST00000405010 MAST3O60307 1309 aa8.27□□□□□ -1.09
HDAC9-202ENST00000405010 FRMD3A2A2Y4 597 aa8.27□□□□□ -1.09
HDAC9-202ENST00000405010 CHUKO15111 745 aa8.27□□□□□ -1.09
HDAC9-202ENST00000405010 GCKP35557 465 aa8.27□□□□□ -1.09
HDAC9-202ENST00000405010 SF3A3Q12874 501 aaKnown RBP eCLIP8.27□□□□□ -1.09
HDAC9-202ENST00000405010 SNCBQ16143 134 aa8.27□□□□□ -1.09
HDAC9-202ENST00000405010 CFAP221Q4G0U5 840 aa8.27□□□□□ -1.09
HDAC9-202ENST00000405010 RUFY4Q6ZNE9 571 aa8.27□□□□□ -1.09
HDAC9-202ENST00000405010 SMIM23A6NLE4 172 aa8.26□□□□□ -1.09
HDAC9-202ENST00000405010 NUTM2BA6NNL0 878 aaPredicted RBP8.26□□□□□ -1.09
HDAC9-202ENST00000405010 NUTM2EB1AL46 878 aaPredicted RBP8.26□□□□□ -1.09
HDAC9-202ENST00000405010 CCDC93Q567U6 631 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms