RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 DUOX1Q9NRD9 1551 aa13.6□□□□□ -0.23
COL25A1-202ENST00000399127 XDHP47989 1333 aa13.6□□□□□ -0.23
COL25A1-202ENST00000399127 STK36Q9NRP7 1315 aa13.6□□□□□ -0.23
COL25A1-202ENST00000399127 KIF20AO95235 890 aa13.59□□□□□ -0.23
COL25A1-202ENST00000399127 AXDND1Q5T1B0 1012 aaPredicted RBP13.59□□□□□ -0.23
COL25A1-202ENST00000399127 CAMKK2Q96RR4 588 aa13.59□□□□□ -0.23
COL25A1-202ENST00000399127 MCM9Q9NXL9 1143 aa13.59□□□□□ -0.23
COL25A1-202ENST00000399127 STK32BQ9NY57 414 aa13.59□□□□□ -0.23
COL25A1-202ENST00000399127 A0A1W2PQ27 194 aa13.59□□□□□ -0.23
COL25A1-202ENST00000399127 A0A1W2PQ64 194 aa13.59□□□□□ -0.23
COL25A1-202ENST00000399127 A0A1W2PQD8 194 aa13.59□□□□□ -0.23
COL25A1-202ENST00000399127 LDHBP07195 334 aaKnown RBP13.59□□□□□ -0.23
COL25A1-202ENST00000399127 USP17L8P0C7I0 530 aa13.59□□□□□ -0.23
COL25A1-202ENST00000399127 U2AF2P26368 475 aaKnown RBP eCLIP13.59□□□□□ -0.23
COL25A1-202ENST00000399127 NR5A1Q13285 461 aa13.59□□□□□ -0.23
COL25A1-202ENST00000399127 SLC39A14Q15043 492 aa13.59□□□□□ -0.23
COL25A1-202ENST00000399127 IQCA1Q86XH1 822 aa13.59□□□□□ -0.23
COL25A1-202ENST00000399127 DIS3L2Q8IYB7 885 aaKnown RBP13.59□□□□□ -0.23
COL25A1-202ENST00000399127 CLIC6Q96NY7 704 aa13.59□□□□□ -0.23
COL25A1-202ENST00000399127 PDS5AQ29RF7 1337 aaKnown RBP13.59□□□□□ -0.23
COL25A1-202ENST00000399127 CCDC196A0A1B0GTZ2 297 aa13.58□□□□□ -0.23
COL25A1-202ENST00000399127 CTAGE5O15320 804 aa13.58□□□□□ -0.23
COL25A1-202ENST00000399127 UFL1O94874 794 aa13.58□□□□□ -0.23
COL25A1-202ENST00000399127 PLEKHA8P1O95397 391 aa13.58□□□□□ -0.23
COL25A1-202ENST00000399127 R3HCC1Q9Y3T6 440 aaKnown RBP13.58□□□□□ -0.23
COL25A1-202ENST00000399127 BAZ2BQ9UIF8 2168 aaKnown RBP13.58□□□□□ -0.24
COL25A1-202ENST00000399127 NID2Q14112 1375 aa13.58□□□□□ -0.24
COL25A1-202ENST00000399127 MMP1P03956 469 aa13.58□□□□□ -0.24
COL25A1-202ENST00000399127 PFKFB1P16118 471 aa13.58□□□□□ -0.24
COL25A1-202ENST00000399127 ATP2B1P20020 1258 aa13.58□□□□□ -0.24
COL25A1-202ENST00000399127 SLC15A2Q16348 729 aa13.58□□□□□ -0.24
COL25A1-202ENST00000399127 NOSTRINQ8IVI9 506 aa13.58□□□□□ -0.24
COL25A1-202ENST00000399127 OXER1Q8TDS5 423 aa13.58□□□□□ -0.24
COL25A1-202ENST00000399127 WASF1Q92558 559 aa13.58□□□□□ -0.24
COL25A1-202ENST00000399127 LEMD3Q9Y2U8 911 aa13.58□□□□□ -0.24
COL25A1-202ENST00000399127 TNS1Q9HBL0 1735 aaKnown RBP13.58□□□□□ -0.24
COL25A1-202ENST00000399127 UQCRHLA0A096LP55 91 aa13.57□□□□□ -0.24
COL25A1-202ENST00000399127 DEXIO95424 95 aa13.57□□□□□ -0.24
COL25A1-202ENST00000399127 UQCRHP07919 91 aa13.57□□□□□ -0.24
COL25A1-202ENST00000399127 PTPAQ15257 358 aa13.57□□□□□ -0.24
COL25A1-202ENST00000399127 STX1AQ16623 288 aa13.57□□□□□ -0.24
COL25A1-202ENST00000399127 CRY2Q49AN0 593 aa13.57□□□□□ -0.24
COL25A1-202ENST00000399127 ZNF804AQ7Z570 1209 aa13.57□□□□□ -0.24
COL25A1-202ENST00000399127 CATIPQ7Z7H3 387 aa13.57□□□□□ -0.24
COL25A1-202ENST00000399127 SH3RF3Q8TEJ3 882 aaPredicted RBP13.57□□□□□ -0.24
COL25A1-202ENST00000399127 MAP3K14Q99558 947 aa13.57□□□□□ -0.24
COL25A1-202ENST00000399127 CCDC88AQ3V6T2 1871 aa13.57□□□□□ -0.24
COL25A1-202ENST00000399127 BIN1O00499 593 aa13.57□□□□□ -0.24
COL25A1-202ENST00000399127 ZNF202O95125 648 aa13.57□□□□□ -0.24
COL25A1-202ENST00000399127 SAFBQ15424 915 aaKnown RBP eCLIP13.57□□□□□ -0.24
COL25A1-202ENST00000399127 SPTY2D1Q68D10 685 aaPredicted RBP13.57□□□□□ -0.24
COL25A1-202ENST00000399127 C17orf53Q8N3J3 647 aaPredicted RBP13.57□□□□□ -0.24
COL25A1-202ENST00000399127 TDRD7Q8NHU6 1098 aaKnown RBP13.57□□□□□ -0.24
COL25A1-202ENST00000399127 PIBF1Q8WXW3 757 aa13.57□□□□□ -0.24
COL25A1-202ENST00000399127 MTA3Q9BTC8 594 aa13.57□□□□□ -0.24
COL25A1-202ENST00000399127 CCDC94Q9BW85 323 aaPredicted RBP13.57□□□□□ -0.24
COL25A1-202ENST00000399127 TRIM5Q9C035 493 aa13.57□□□□□ -0.24
COL25A1-202ENST00000399127 ATP8A2Q9NTI2 1148 aa13.57□□□□□ -0.24
COL25A1-202ENST00000399127 VPS54Q9P1Q0 977 aa13.57□□□□□ -0.24
COL25A1-202ENST00000399127 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.57□□□□□ -0.24
COL25A1-202ENST00000399127 ZNF500O60304 480 aaPredicted RBP13.56□□□□□ -0.24
COL25A1-202ENST00000399127 USP5P45974 858 aa13.56□□□□□ -0.24
COL25A1-202ENST00000399127 BAG6P46379 1132 aa13.56□□□□□ -0.24
COL25A1-202ENST00000399127 TROAPQ12815 778 aa13.56□□□□□ -0.24
COL25A1-202ENST00000399127 SPECC1Q5M775 1068 aa13.56□□□□□ -0.24
COL25A1-202ENST00000399127 WDR66Q8TBY9 1149 aa13.56□□□□□ -0.24
COL25A1-202ENST00000399127 SHISA4Q96DD7 197 aa13.56□□□□□ -0.24
COL25A1-202ENST00000399127 DYNLL2Q96FJ2 89 aa13.56□□□□□ -0.24
COL25A1-202ENST00000399127 V9GY48 417 aaPredicted RBP13.56□□□□□ -0.24
COL25A1-202ENST00000399127 TSPY2A6NKD2 308 aa13.56□□□□□ -0.24
COL25A1-202ENST00000399127 FGRP09769 529 aa13.56□□□□□ -0.24
COL25A1-202ENST00000399127 CMA1P23946 247 aa13.56□□□□□ -0.24
COL25A1-202ENST00000399127 TOB1P50616 345 aaPredicted RBP13.56□□□□□ -0.24
COL25A1-202ENST00000399127 AKAP17AQ02040 695 aaKnown RBP13.56□□□□□ -0.24
COL25A1-202ENST00000399127 SHC4Q6S5L8 630 aa13.56□□□□□ -0.24
COL25A1-202ENST00000399127 GTPBP4Q9BZE4 634 aaKnown RBP13.56□□□□□ -0.24
COL25A1-202ENST00000399127 IQCB1Q15051 598 aa13.55□□□□□ -0.24
COL25A1-202ENST00000399127 ISM2Q6H9L7 571 aa13.55□□□□□ -0.24
COL25A1-202ENST00000399127 ARPP21Q9UBL0 812 aaPredicted RBP13.55□□□□□ -0.24
COL25A1-202ENST00000399127 FAM205CA6NFA0 338 aa13.55□□□□□ -0.24
COL25A1-202ENST00000399127 GOLGA6L19H0YKK7 550 aa13.55□□□□□ -0.24
COL25A1-202ENST00000399127 BRD2P25440 801 aaKnown RBP13.55□□□□□ -0.24
COL25A1-202ENST00000399127 DRC7Q8IY82 874 aa13.55□□□□□ -0.24
COL25A1-202ENST00000399127 TGFBRAP1Q8WUH2 860 aa13.55□□□□□ -0.24
COL25A1-202ENST00000399127 SAP30BPQ9UHR5 308 aaKnown RBP13.55□□□□□ -0.24
COL25A1-202ENST00000399127 GGA1Q9UJY5 639 aa13.55□□□□□ -0.24
COL25A1-202ENST00000399127 MYH6P13533 1939 aa13.55□□□□□ -0.24
COL25A1-202ENST00000399127 BBOX1O75936 387 aa13.54□□□□□ -0.24
COL25A1-202ENST00000399127 SLC3A2P08195 630 aaKnown RBP13.54□□□□□ -0.24
COL25A1-202ENST00000399127 RCAN1P53805 252 aa13.54□□□□□ -0.24
COL25A1-202ENST00000399127 PDE4BQ07343 736 aa13.54□□□□□ -0.24
COL25A1-202ENST00000399127 FUT2Q10981 343 aa13.54□□□□□ -0.24
COL25A1-202ENST00000399127 PKN1Q16512 942 aa13.54□□□□□ -0.24
COL25A1-202ENST00000399127 MAPKAPK5Q8IW41 473 aa13.54□□□□□ -0.24
COL25A1-202ENST00000399127 CD209Q9NNX6 404 aa13.54□□□□□ -0.24
COL25A1-202ENST00000399127 CABP5Q9NP86 173 aa13.54□□□□□ -0.24
COL25A1-202ENST00000399127 ANO10Q9NW15 660 aa13.54□□□□□ -0.24
COL25A1-202ENST00000399127 KIAA1468Q9P260 1216 aa13.54□□□□□ -0.24
COL25A1-202ENST00000399127 POLLQ9UGP5 575 aa13.54□□□□□ -0.24
COL25A1-202ENST00000399127 BECN2A8MW95 431 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms