RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 SLC39A6Q13433 755 aa6.16□□□□□ -1.42
PTPRD-205ENST00000397611 CCDC178Q5BJE1 867 aa6.16□□□□□ -1.42
PTPRD-205ENST00000397611 AKNAD1Q5T1N1 836 aa6.16□□□□□ -1.42
PTPRD-205ENST00000397611 ARL6IP4Q66PJ3 421 aaKnown RBP6.16□□□□□ -1.42
PTPRD-205ENST00000397611 XAGE2Q96GT9 111 aa6.16□□□□□ -1.42
PTPRD-205ENST00000397611 AATFQ9NY61 560 aaKnown RBP eCLIP6.16□□□□□ -1.42
PTPRD-205ENST00000397611 ANKRD18BA2A2Z9 1011 aa6.16□□□□□ -1.42
PTPRD-205ENST00000397611 SPA17Q15506 151 aa6.16□□□□□ -1.42
PTPRD-205ENST00000397611 CEP112Q8N8E3 955 aa6.16□□□□□ -1.42
PTPRD-205ENST00000397611 KLHDC4Q8TBB5 520 aa6.16□□□□□ -1.42
PTPRD-205ENST00000397611 UTP14AQ9BVJ6 771 aaKnown RBP6.16□□□□□ -1.42
PTPRD-205ENST00000397611 TRIM75PA6NK02 468 aa6.16□□□□□ -1.42
PTPRD-205ENST00000397611 CLNS1AP54105 237 aaKnown RBP6.16□□□□□ -1.42
PTPRD-205ENST00000397611 LDHAL6AQ6ZMR3 332 aa6.16□□□□□ -1.42
PTPRD-205ENST00000397611 OTUD6BQ8N6M0 293 aa6.16□□□□□ -1.42
PTPRD-205ENST00000397611 EDC3Q96F86 508 aaKnown RBP6.16□□□□□ -1.42
PTPRD-205ENST00000397611 ANAPC4Q9UJX5 808 aa6.16□□□□□ -1.42
PTPRD-205ENST00000397611 MARF1Q9Y4F3 1742 aaKnown RBP6.16□□□□□ -1.42
PTPRD-205ENST00000397611 POLR3DP05423 398 aaPredicted RBP6.16□□□□□ -1.42
PTPRD-205ENST00000397611 MAP3K9P80192 1104 aa6.16□□□□□ -1.42
PTPRD-205ENST00000397611 SH3RF1Q7Z6J0 888 aa6.16□□□□□ -1.42
PTPRD-205ENST00000397611 CNNM3Q8NE01 707 aa6.16□□□□□ -1.42
PTPRD-205ENST00000397611 AFAP1L1Q8TED9 768 aa6.16□□□□□ -1.42
PTPRD-205ENST00000397611 EDEM3Q9BZQ6 932 aa6.16□□□□□ -1.42
PTPRD-205ENST00000397611 JADE2Q9NQC1 790 aa6.16□□□□□ -1.42
PTPRD-205ENST00000397611 PARP4Q9UKK3 1724 aaKnown RBP6.16□□□□□ -1.42
PTPRD-205ENST00000397611 CCDC175P0C221 793 aa6.16□□□□□ -1.42
PTPRD-205ENST00000397611 NDUFA8P51970 172 aa6.16□□□□□ -1.42
PTPRD-205ENST00000397611 IFFO1Q0D2I5 559 aa6.16□□□□□ -1.42
PTPRD-205ENST00000397611 MORC3Q14149 939 aa6.16□□□□□ -1.42
PTPRD-205ENST00000397611 ERCC6LQ2NKX8 1250 aa6.16□□□□□ -1.42
PTPRD-205ENST00000397611 CCDC121Q6ZUS5 278 aa6.16□□□□□ -1.42
PTPRD-205ENST00000397611 DIS3L2Q8IYB7 885 aaKnown RBP6.16□□□□□ -1.42
PTPRD-205ENST00000397611 RETREG2Q8NC44 543 aa6.16□□□□□ -1.42
PTPRD-205ENST00000397611 CAPZA3Q96KX2 299 aa6.16□□□□□ -1.42
PTPRD-205ENST00000397611 RAB21Q9UL25 225 aa6.16□□□□□ -1.42
PTPRD-205ENST00000397611 A0A1B0GTH6 734 aa6.15□□□□□ -1.42
PTPRD-205ENST00000397611 FOXP2O15409 715 aa6.15□□□□□ -1.42
PTPRD-205ENST00000397611 SPATA1Q5VX52 437 aa6.15□□□□□ -1.42
PTPRD-205ENST00000397611 NRBP1Q9UHY1 535 aa6.15□□□□□ -1.42
PTPRD-205ENST00000397611 NFE2L3Q9Y4A8 694 aa6.15□□□□□ -1.42
PTPRD-205ENST00000397611 SRPRBQ9Y5M8 271 aaKnown RBP6.15□□□□□ -1.42
PTPRD-205ENST00000397611 ABCB11O95342 1321 aa6.15□□□□□ -1.42
PTPRD-205ENST00000397611 FGFR2P21802 821 aa6.15□□□□□ -1.42
PTPRD-205ENST00000397611 KMT5BQ4FZB7 885 aa6.15□□□□□ -1.42
PTPRD-205ENST00000397611 FBXO38Q6PIJ6 1188 aa6.15□□□□□ -1.42
PTPRD-205ENST00000397611 RAB11FIP4Q86YS3 637 aa6.15□□□□□ -1.42
PTPRD-205ENST00000397611 RUBCNQ92622 972 aa6.15□□□□□ -1.42
PTPRD-205ENST00000397611 HAUS4Q9H6D7 363 aa6.15□□□□□ -1.42
PTPRD-205ENST00000397611 SEC31AO94979 1220 aaKnown RBP6.15□□□□□ -1.42
PTPRD-205ENST00000397611 EZRP15311 586 aaKnown RBP6.15□□□□□ -1.42
PTPRD-205ENST00000397611 LMOD1P29536 600 aaPredicted RBP6.15□□□□□ -1.42
PTPRD-205ENST00000397611 IRX5P78411 483 aaPredicted RBP6.15□□□□□ -1.42
PTPRD-205ENST00000397611 CDKAL1Q5VV42 579 aa6.15□□□□□ -1.42
PTPRD-205ENST00000397611 ZEB2O60315 1214 aa6.15□□□□□ -1.43
PTPRD-205ENST00000397611 NEBLO76041 1014 aa6.15□□□□□ -1.43
PTPRD-205ENST00000397611 TXLNAP40222 546 aa6.15□□□□□ -1.43
PTPRD-205ENST00000397611 FIGNQ5HY92 759 aa6.15□□□□□ -1.43
PTPRD-205ENST00000397611 VGLL2Q8N8G2 317 aa6.15□□□□□ -1.43
PTPRD-205ENST00000397611 FAM76AQ8TAV0 307 aa6.15□□□□□ -1.43
PTPRD-205ENST00000397611 NUP133Q8WUM0 1156 aa6.15□□□□□ -1.43
PTPRD-205ENST00000397611 ESR2Q92731 530 aa6.15□□□□□ -1.43
PTPRD-205ENST00000397611 SEC62Q99442 399 aaKnown RBP6.15□□□□□ -1.43
PTPRD-205ENST00000397611 GOLPH3LQ9H4A5 285 aa6.15□□□□□ -1.43
PTPRD-205ENST00000397611 VIPAS39Q9H9C1 493 aa6.15□□□□□ -1.43
PTPRD-205ENST00000397611 KIF13AQ9H1H9 1805 aa6.15□□□□□ -1.43
PTPRD-205ENST00000397611 A0A1B0GVL5 298 aa6.15□□□□□ -1.43
PTPRD-205ENST00000397611 ZC3H6P61129 1189 aaKnown RBP6.15□□□□□ -1.43
PTPRD-205ENST00000397611 PUM3Q15397 648 aaKnown RBP6.15□□□□□ -1.43
PTPRD-205ENST00000397611 GALNT17Q6IS24 598 aa6.15□□□□□ -1.43
PTPRD-205ENST00000397611 IQUBQ8NA54 791 aa6.15□□□□□ -1.43
PTPRD-205ENST00000397611 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.15□□□□□ -1.43
PTPRD-205ENST00000397611 CUEDC2Q9H467 287 aa6.15□□□□□ -1.43
PTPRD-205ENST00000397611 GOPCQ9HD26 462 aa6.15□□□□□ -1.43
PTPRD-205ENST00000397611 GOLGA6L10A0A0M3HER8 536 aa6.15□□□□□ -1.43
PTPRD-205ENST00000397611 MYL6BP14649 208 aa6.15□□□□□ -1.43
PTPRD-205ENST00000397611 CALML3P27482 149 aa6.15□□□□□ -1.43
PTPRD-205ENST00000397611 USP5P45974 858 aa6.15□□□□□ -1.43
PTPRD-205ENST00000397611 GNAQP50148 359 aa6.15□□□□□ -1.43
PTPRD-205ENST00000397611 TTC39AQ5SRH9 613 aa6.15□□□□□ -1.43
PTPRD-205ENST00000397611 SLC9C2Q5TAH2 1124 aa6.15□□□□□ -1.43
PTPRD-205ENST00000397611 ARMCX5Q6P1M9 558 aa6.15□□□□□ -1.43
PTPRD-205ENST00000397611 TRIM65Q6PJ69 517 aa6.15□□□□□ -1.43
PTPRD-205ENST00000397611 MSANTD4Q8NCY6 345 aa6.15□□□□□ -1.43
PTPRD-205ENST00000397611 AIDAQ96BJ3 306 aa6.15□□□□□ -1.43
PTPRD-205ENST00000397611 ANO9A1A5B4 782 aa6.14□□□□□ -1.43
PTPRD-205ENST00000397611 FGRP09769 529 aa6.14□□□□□ -1.43
PTPRD-205ENST00000397611 INPP5BP32019 993 aa6.14□□□□□ -1.43
PTPRD-205ENST00000397611 ZNF569Q5MCW4 686 aa6.14□□□□□ -1.43
PTPRD-205ENST00000397611 STAG1Q8WVM7 1258 aa6.14□□□□□ -1.43
PTPRD-205ENST00000397611 PPP1R13BQ96KQ4 1090 aa6.14□□□□□ -1.43
PTPRD-205ENST00000397611 CCDC114Q96M63 670 aa6.14□□□□□ -1.43
PTPRD-205ENST00000397611 CDC5LQ99459 802 aaKnown RBP6.14□□□□□ -1.43
PTPRD-205ENST00000397611 NAPBQ9H115 298 aa6.14□□□□□ -1.43
PTPRD-205ENST00000397611 RMND1Q9NWS8 449 aa6.14□□□□□ -1.43
PTPRD-205ENST00000397611 CDC23Q9UJX2 597 aa6.14□□□□□ -1.43
PTPRD-205ENST00000397611 A0A1W2PQC6 194 aa6.14□□□□□ -1.43
PTPRD-205ENST00000397611 PDE8AO60658 829 aa6.14□□□□□ -1.43
PTPRD-205ENST00000397611 PNMA6AP0CW24 399 aaPredicted RBP6.14□□□□□ -1.43
PTPRD-205ENST00000397611 STIM1Q13586 685 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms