RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 ZBTB43O43298 467 aa15.23■□□□□ 0.03
TRIM40-207ENST00000396581 GNG11P61952 73 aa15.23■□□□□ 0.03
TRIM40-207ENST00000396581 FMR1Q06787 632 aaKnown RBP eCLIP15.23■□□□□ 0.03
TRIM40-207ENST00000396581 SLC20A2Q08357 652 aa15.23■□□□□ 0.03
TRIM40-207ENST00000396581 NR1I3Q14994 352 aa15.23■□□□□ 0.03
TRIM40-207ENST00000396581 POSTNQ15063 836 aa15.23■□□□□ 0.03
TRIM40-207ENST00000396581 CT47A1Q5JQC4 288 aaPredicted RBP15.23■□□□□ 0.03
TRIM40-207ENST00000396581 PI16Q6UXB8 463 aa15.23■□□□□ 0.03
TRIM40-207ENST00000396581 SENP2Q9HC62 589 aa15.23■□□□□ 0.03
TRIM40-207ENST00000396581 PODXL2Q9NZ53 605 aa15.23■□□□□ 0.03
TRIM40-207ENST00000396581 FBXO2Q9UK22 296 aaPredicted RBP15.23■□□□□ 0.03
TRIM40-207ENST00000396581 NIP7Q9Y221 180 aaKnown RBP eCLIP15.23■□□□□ 0.03
TRIM40-207ENST00000396581 NFE2L3Q9Y4A8 694 aa15.23■□□□□ 0.03
TRIM40-207ENST00000396581 RIPOR2Q9Y4F9 1068 aa15.23■□□□□ 0.03
TRIM40-207ENST00000396581 FOXN1O15353 648 aa15.22■□□□□ 0.03
TRIM40-207ENST00000396581 FMNL1O95466 1100 aaPredicted RBP15.22■□□□□ 0.03
TRIM40-207ENST00000396581 IRX5P78411 483 aaPredicted RBP15.22■□□□□ 0.03
TRIM40-207ENST00000396581 GNL2Q13823 731 aaKnown RBP15.22■□□□□ 0.03
TRIM40-207ENST00000396581 TRIM29Q14134 588 aa15.22■□□□□ 0.03
TRIM40-207ENST00000396581 TTF1Q15361 905 aaPredicted RBP15.22■□□□□ 0.03
TRIM40-207ENST00000396581 MUM1L1Q5H9M0 696 aa15.22■□□□□ 0.03
TRIM40-207ENST00000396581 JAKMIP3Q5VZ66 844 aa15.22■□□□□ 0.03
TRIM40-207ENST00000396581 FAM196AQ6ZSG2 479 aa15.22■□□□□ 0.03
TRIM40-207ENST00000396581 TOGARAM2Q6ZUX3 1019 aa15.22■□□□□ 0.03
TRIM40-207ENST00000396581 NOSTRINQ8IVI9 506 aa15.22■□□□□ 0.03
TRIM40-207ENST00000396581 MED15Q96RN5 788 aa15.22■□□□□ 0.03
TRIM40-207ENST00000396581 GREM2Q9H772 168 aa15.22■□□□□ 0.03
TRIM40-207ENST00000396581 ITGA6P23229 1130 aa15.21■□□□□ 0.03
TRIM40-207ENST00000396581 ERCC5P28715 1186 aaPredicted RBP15.21■□□□□ 0.03
TRIM40-207ENST00000396581 TOB1P50616 345 aaPredicted RBP15.21■□□□□ 0.03
TRIM40-207ENST00000396581 HNRNPH2P55795 449 aaKnown RBP15.21■□□□□ 0.03
TRIM40-207ENST00000396581 MSL3Q8N5Y2 521 aaKnown RBP15.21■□□□□ 0.03
TRIM40-207ENST00000396581 PANX2Q96RD6 677 aa15.21■□□□□ 0.03
TRIM40-207ENST00000396581 FUT8Q9BYC5 575 aa15.21■□□□□ 0.03
TRIM40-207ENST00000396581 TIAM2Q8IVF5 1701 aa15.21■□□□□ 0.03
TRIM40-207ENST00000396581 A0A1B0GTH6 734 aa15.21■□□□□ 0.03
TRIM40-207ENST00000396581 MMP1P03956 469 aa15.21■□□□□ 0.03
TRIM40-207ENST00000396581 IFNAR1P17181 557 aa15.21■□□□□ 0.03
TRIM40-207ENST00000396581 TXLNBQ8N3L3 684 aa15.21■□□□□ 0.03
TRIM40-207ENST00000396581 WASF1Q92558 559 aa15.21■□□□□ 0.03
TRIM40-207ENST00000396581 PARD6BQ9BYG5 372 aa15.21■□□□□ 0.03
TRIM40-207ENST00000396581 ARFGAP3Q9NP61 516 aa15.21■□□□□ 0.03
TRIM40-207ENST00000396581 RAI14Q9P0K7 980 aa15.21■□□□□ 0.03
TRIM40-207ENST00000396581 EP400Q96L91 3159 aa15.21■□□□□ 0.02
TRIM40-207ENST00000396581 TCRBV5S4A2TA0A5A2 114 aa15.2■□□□□ 0.02
TRIM40-207ENST00000396581 CCDC151A5D8V7 595 aa15.2■□□□□ 0.02
TRIM40-207ENST00000396581 GOLGA8AA7E2F4 631 aa15.2■□□□□ 0.02
TRIM40-207ENST00000396581 B4E1Z4 1266 aa15.2■□□□□ 0.02
TRIM40-207ENST00000396581 MAP2K7O14733 419 aa15.2■□□□□ 0.02
TRIM40-207ENST00000396581 NTSR2O95665 410 aa15.2■□□□□ 0.02
TRIM40-207ENST00000396581 RXRAP19793 462 aa15.2■□□□□ 0.02
TRIM40-207ENST00000396581 OAS2P29728 719 aaKnown RBP15.2■□□□□ 0.02
TRIM40-207ENST00000396581 SMC1AQ14683 1233 aaKnown RBP15.2■□□□□ 0.02
TRIM40-207ENST00000396581 PTPN21Q16825 1174 aa15.2■□□□□ 0.02
TRIM40-207ENST00000396581 SLC9C2Q5TAH2 1124 aa15.2■□□□□ 0.02
TRIM40-207ENST00000396581 KRT27Q7Z3Y8 459 aa15.2■□□□□ 0.02
TRIM40-207ENST00000396581 MICU3Q86XE3 530 aa15.2■□□□□ 0.02
TRIM40-207ENST00000396581 GOLGA1Q92805 767 aa15.2■□□□□ 0.02
TRIM40-207ENST00000396581 CCDC85AQ96PX6 553 aaPredicted RBP15.2■□□□□ 0.02
TRIM40-207ENST00000396581 EPC1Q9H2F5 836 aa15.2■□□□□ 0.02
TRIM40-207ENST00000396581 FOXP1Q9H334 677 aaPredicted RBP15.2■□□□□ 0.02
TRIM40-207ENST00000396581 NARFQ9UHQ1 456 aa15.2■□□□□ 0.02
TRIM40-207ENST00000396581 LY75O60449 1722 aa15.2■□□□□ 0.02
TRIM40-207ENST00000396581 ANKRD18BA2A2Z9 1011 aa15.2■□□□□ 0.02
TRIM40-207ENST00000396581 PRR29P0C7W0 189 aa15.2■□□□□ 0.02
TRIM40-207ENST00000396581 TXLNAP40222 546 aa15.2■□□□□ 0.02
TRIM40-207ENST00000396581 ADKP55263 362 aaKnown RBP15.2■□□□□ 0.02
TRIM40-207ENST00000396581 SSRP1Q08945 709 aaKnown RBP15.2■□□□□ 0.02
TRIM40-207ENST00000396581 BRD3Q15059 726 aa15.2■□□□□ 0.02
TRIM40-207ENST00000396581 RILPL1Q5EBL4 403 aa15.2■□□□□ 0.02
TRIM40-207ENST00000396581 ZNF772Q68DY9 489 aaPredicted RBP15.2■□□□□ 0.02
TRIM40-207ENST00000396581 KANK3Q6NY19 840 aa15.2■□□□□ 0.02
TRIM40-207ENST00000396581 APTXQ7Z2E3 356 aaKnown RBP15.2■□□□□ 0.02
TRIM40-207ENST00000396581 VGLL2Q8N8G2 317 aa15.2■□□□□ 0.02
TRIM40-207ENST00000396581 HNRNPLLQ8WVV9 542 aaKnown RBP15.2■□□□□ 0.02
TRIM40-207ENST00000396581 NAA15Q9BXJ9 866 aaKnown RBP15.2■□□□□ 0.02
TRIM40-207ENST00000396581 PSD3Q9NYI0 1048 aa15.2■□□□□ 0.02
TRIM40-207ENST00000396581 GNPATO15228 680 aa15.19■□□□□ 0.02
TRIM40-207ENST00000396581 ACTN4O43707 911 aaKnown RBP15.19■□□□□ 0.02
TRIM40-207ENST00000396581 PBX1P40424 430 aa15.19■□□□□ 0.02
TRIM40-207ENST00000396581 PLCD1P51178 756 aa15.19■□□□□ 0.02
TRIM40-207ENST00000396581 TAF7LQ5H9L4 462 aa15.19■□□□□ 0.02
TRIM40-207ENST00000396581 SMARCE1Q969G3 411 aa15.19■□□□□ 0.02
TRIM40-207ENST00000396581 DHX58Q96C10 678 aa15.19■□□□□ 0.02
TRIM40-207ENST00000396581 STRBPQ96SI9 672 aaKnown RBP15.19■□□□□ 0.02
TRIM40-207ENST00000396581 SERTAD1Q9UHV2 236 aa15.19■□□□□ 0.02
TRIM40-207ENST00000396581 SRPRBQ9Y5M8 271 aaKnown RBP15.19■□□□□ 0.02
TRIM40-207ENST00000396581 MYH3P11055 1940 aa15.18■□□□□ 0.02
TRIM40-207ENST00000396581 FECHP22830 423 aa15.18■□□□□ 0.02
TRIM40-207ENST00000396581 ARID4AP29374 1257 aaPredicted RBP15.18■□□□□ 0.02
TRIM40-207ENST00000396581 GRIN1Q05586 938 aa15.18■□□□□ 0.02
TRIM40-207ENST00000396581 TUBB2AQ13885 445 aa15.18■□□□□ 0.02
TRIM40-207ENST00000396581 LDHAL6AQ6ZMR3 332 aa15.18■□□□□ 0.02
TRIM40-207ENST00000396581 FAM177A1Q8N128 213 aaPredicted RBP15.18■□□□□ 0.02
TRIM40-207ENST00000396581 TUBB2BQ9BVA1 445 aa15.18■□□□□ 0.02
TRIM40-207ENST00000396581 MRPL44Q9H9J2 332 aaKnown RBP15.18■□□□□ 0.02
TRIM40-207ENST00000396581 PIH1D3Q9NQM4 214 aaKnown RBP15.18■□□□□ 0.02
TRIM40-207ENST00000396581 RTCBQ9Y3I0 505 aaKnown RBP15.18■□□□□ 0.02
TRIM40-207ENST00000396581 BTBD18B2RXH4 712 aa15.18■□□□□ 0.02
TRIM40-207ENST00000396581 AKR1B15C9JRZ8 316 aaPredicted RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms