RNA–Protein interactions for RNA: ENST00000396410.8

PDXDC1-202, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDXDC1, Length 4,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-202ENST00000396410 TSPY8P0CW00 308 aa13.23□□□□□ -0.29
PDXDC1-202ENST00000396410 FANCCQ00597 558 aa13.23□□□□□ -0.29
PDXDC1-202ENST00000396410 CCDC144BQ3MJ40 725 aa13.23□□□□□ -0.29
PDXDC1-202ENST00000396410 AXDND1Q5T1B0 1012 aaPredicted RBP13.23□□□□□ -0.29
PDXDC1-202ENST00000396410 CEP135Q66GS9 1140 aa13.23□□□□□ -0.29
PDXDC1-202ENST00000396410 SHC4Q6S5L8 630 aa13.23□□□□□ -0.29
PDXDC1-202ENST00000396410 SPTLC3Q9NUV7 552 aa13.23□□□□□ -0.29
PDXDC1-202ENST00000396410 WTIPA6NIX2 430 aaPredicted RBP13.23□□□□□ -0.29
PDXDC1-202ENST00000396410 ZNF174Q15697 407 aa13.23□□□□□ -0.29
PDXDC1-202ENST00000396410 ENAHQ8N8S7 591 aaPredicted RBP13.23□□□□□ -0.29
PDXDC1-202ENST00000396410 STX8Q9UNK0 236 aa13.23□□□□□ -0.29
PDXDC1-202ENST00000396410 BMP15O95972 392 aa13.22□□□□□ -0.29
PDXDC1-202ENST00000396410 PCP11498 1178 aaKnown RBP13.22□□□□□ -0.29
PDXDC1-202ENST00000396410 PRDX5P30044 214 aa13.22□□□□□ -0.29
PDXDC1-202ENST00000396410 RESP18Q5W5W9 173 aa13.22□□□□□ -0.29
PDXDC1-202ENST00000396410 NKX2-3Q8TAU0 364 aa13.22□□□□□ -0.29
PDXDC1-202ENST00000396410 SERTAD1Q9UHV2 236 aa13.22□□□□□ -0.29
PDXDC1-202ENST00000396410 MROH7-TTC4A0A0A0MT08 1334 aa13.22□□□□□ -0.29
PDXDC1-202ENST00000396410 ST5P78524 1137 aa13.22□□□□□ -0.29
PDXDC1-202ENST00000396410 POSTNQ15063 836 aa13.22□□□□□ -0.29
PDXDC1-202ENST00000396410 LONRF3Q496Y0 759 aa13.22□□□□□ -0.29
PDXDC1-202ENST00000396410 WDR66Q8TBY9 1149 aa13.22□□□□□ -0.29
PDXDC1-202ENST00000396410 SHANK3Q9BYB0 1731 aa13.22□□□□□ -0.29
PDXDC1-202ENST00000396410 ZNF287Q9HBT7 754 aa13.22□□□□□ -0.29
PDXDC1-202ENST00000396410 PCDHB6Q9Y5E3 794 aa13.22□□□□□ -0.29
PDXDC1-202ENST00000396410 ATP8A2Q9NTI2 1148 aa13.22□□□□□ -0.29
PDXDC1-202ENST00000396410 RIOK3O14730 519 aaKnown RBP13.21□□□□□ -0.29
PDXDC1-202ENST00000396410 CTR9Q6PD62 1173 aa13.21□□□□□ -0.29
PDXDC1-202ENST00000396410 FAM217BQ9NTX9 383 aaPredicted RBP13.21□□□□□ -0.29
PDXDC1-202ENST00000396410 CNTNAP4Q9C0A0 1308 aa13.21□□□□□ -0.29
PDXDC1-202ENST00000396410 KLRK1P26718 216 aa13.21□□□□□ -0.29
PDXDC1-202ENST00000396410 ARID5BQ14865 1188 aa13.21□□□□□ -0.29
PDXDC1-202ENST00000396410 VPS72Q15906 364 aa13.21□□□□□ -0.29
PDXDC1-202ENST00000396410 ARHGEF1Q92888 912 aaKnown RBP13.21□□□□□ -0.29
PDXDC1-202ENST00000396410 IMPACTQ9P2X3 320 aa13.21□□□□□ -0.29
PDXDC1-202ENST00000396410 PAXBP1Q9Y5B6 917 aa13.21□□□□□ -0.29
PDXDC1-202ENST00000396410 PCDHA5Q9Y5H7 936 aa13.21□□□□□ -0.29
PDXDC1-202ENST00000396410 NUP98P52948 1817 aa13.21□□□□□ -0.29
PDXDC1-202ENST00000396410 RCAN1P53805 252 aa13.21□□□□□ -0.29
PDXDC1-202ENST00000396410 OXER1Q8TDS5 423 aa13.21□□□□□ -0.29
PDXDC1-202ENST00000396410 NSUN4Q96CB9 384 aaKnown RBP13.21□□□□□ -0.29
PDXDC1-202ENST00000396410 C6orf229H3BNL8 230 aa13.21□□□□□ -0.3
PDXDC1-202ENST00000396410 CCP110O43303 1012 aa13.21□□□□□ -0.3
PDXDC1-202ENST00000396410 DDAH1O94760 285 aa13.21□□□□□ -0.3
PDXDC1-202ENST00000396410 PLEKHA8P1O95397 391 aa13.21□□□□□ -0.3
PDXDC1-202ENST00000396410 TFAP4Q01664 338 aa13.21□□□□□ -0.3
PDXDC1-202ENST00000396410 RGS22Q8NE09 1264 aa13.21□□□□□ -0.3
PDXDC1-202ENST00000396410 TSC1Q92574 1164 aa13.21□□□□□ -0.3
PDXDC1-202ENST00000396410 DOT1LQ8TEK3 1739 aa13.2□□□□□ -0.3
PDXDC1-202ENST00000396410 LAMA4Q16363 1823 aa13.2□□□□□ -0.3
PDXDC1-202ENST00000396410 CCDC194A0A1B0GVG4 234 aa13.2□□□□□ -0.3
PDXDC1-202ENST00000396410 VWA3AA6NCI4 1184 aa13.2□□□□□ -0.3
PDXDC1-202ENST00000396410 PES1O00541 588 aaKnown RBP13.2□□□□□ -0.3
PDXDC1-202ENST00000396410 PIK3AP1Q6ZUJ8 805 aa13.2□□□□□ -0.3
PDXDC1-202ENST00000396410 RIOK1Q9BRS2 568 aaKnown RBP13.2□□□□□ -0.3
PDXDC1-202ENST00000396410 SAP30BPQ9UHR5 308 aaKnown RBP13.2□□□□□ -0.3
PDXDC1-202ENST00000396410 MCM7P33993 719 aa13.2□□□□□ -0.3
PDXDC1-202ENST00000396410 FAM196AQ6ZSG2 479 aa13.2□□□□□ -0.3
PDXDC1-202ENST00000396410 ANKRD20A12PQ8NF67 263 aa13.2□□□□□ -0.3
PDXDC1-202ENST00000396410 KIF18AQ8NI77 898 aa13.2□□□□□ -0.3
PDXDC1-202ENST00000396410 PRPF3O43395 683 aaKnown RBP13.2□□□□□ -0.3
PDXDC1-202ENST00000396410 UFL1O94874 794 aa13.2□□□□□ -0.3
PDXDC1-202ENST00000396410 TPM1P09493 284 aa13.2□□□□□ -0.3
PDXDC1-202ENST00000396410 CYP2D6P10635 497 aa13.2□□□□□ -0.3
PDXDC1-202ENST00000396410 PTPAQ15257 358 aa13.2□□□□□ -0.3
PDXDC1-202ENST00000396410 TTC38Q5R3I4 469 aa13.2□□□□□ -0.3
PDXDC1-202ENST00000396410 RC3H1Q5TC82 1133 aaKnown RBP13.2□□□□□ -0.3
PDXDC1-202ENST00000396410 FBXO33Q7Z6M2 555 aa13.2□□□□□ -0.3
PDXDC1-202ENST00000396410 CSRNP2Q9H175 543 aa13.2□□□□□ -0.3
PDXDC1-202ENST00000396410 DCP1AQ9NPI6 582 aaPredicted RBP13.2□□□□□ -0.3
PDXDC1-202ENST00000396410 NMT2O60551 498 aa13.19□□□□□ -0.3
PDXDC1-202ENST00000396410 FILIP1LQ4L180 1135 aa13.19□□□□□ -0.3
PDXDC1-202ENST00000396410 TGFBRAP1Q8WUH2 860 aa13.19□□□□□ -0.3
PDXDC1-202ENST00000396410 BPIFA3Q9BQP9 254 aa13.19□□□□□ -0.3
PDXDC1-202ENST00000396410 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.19□□□□□ -0.3
PDXDC1-202ENST00000396410 MAP3K14Q99558 947 aa13.19□□□□□ -0.3
PDXDC1-202ENST00000396410 ANAPC4Q9UJX5 808 aa13.19□□□□□ -0.3
PDXDC1-202ENST00000396410 MYH3P11055 1940 aa13.19□□□□□ -0.3
PDXDC1-202ENST00000396410 KIF2AO00139 706 aaPredicted RBP13.19□□□□□ -0.3
PDXDC1-202ENST00000396410 IKBKBO14920 756 aa13.19□□□□□ -0.3
PDXDC1-202ENST00000396410 SLC10A5Q5PT55 438 aa13.19□□□□□ -0.3
PDXDC1-202ENST00000396410 USP17L8P0C7I0 530 aa13.18□□□□□ -0.3
PDXDC1-202ENST00000396410 CCDC178Q5BJE1 867 aa13.18□□□□□ -0.3
PDXDC1-202ENST00000396410 RAD21O60216 631 aa13.18□□□□□ -0.3
PDXDC1-202ENST00000396410 PTPREP23469 700 aa13.18□□□□□ -0.3
PDXDC1-202ENST00000396410 CALML3P27482 149 aa13.18□□□□□ -0.3
PDXDC1-202ENST00000396410 GNAQP50148 359 aa13.18□□□□□ -0.3
PDXDC1-202ENST00000396410 SOGA3Q5TF21 947 aa13.18□□□□□ -0.3
PDXDC1-202ENST00000396410 HEATR3Q7Z4Q2 680 aa13.18□□□□□ -0.3
PDXDC1-202ENST00000396410 MAPKAPK5Q8IW41 473 aa13.18□□□□□ -0.3
PDXDC1-202ENST00000396410 FANCLQ9NW38 375 aa13.18□□□□□ -0.3
PDXDC1-202ENST00000396410 SRPRBQ9Y5M8 271 aaKnown RBP13.18□□□□□ -0.3
PDXDC1-202ENST00000396410 ZNF827Q17R98 1081 aa13.18□□□□□ -0.3
PDXDC1-202ENST00000396410 SLF2Q8IX21 1173 aa13.18□□□□□ -0.3
PDXDC1-202ENST00000396410 MLKLQ8NB16 471 aa13.18□□□□□ -0.3
PDXDC1-202ENST00000396410 SCG2P13521 617 aa13.18□□□□□ -0.3
PDXDC1-202ENST00000396410 PTF1AQ7RTS3 328 aa13.18□□□□□ -0.3
PDXDC1-202ENST00000396410 LEMD3Q9Y2U8 911 aa13.18□□□□□ -0.3
PDXDC1-202ENST00000396410 SMIM22K7EJ46 135 aa13.17□□□□□ -0.3
PDXDC1-202ENST00000396410 ATP1A3P13637 1013 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms