RNA–Protein interactions for RNA: ENST00000394729.6

PRKCD-202, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-202ENST00000394729 AMOTL1Q8IY63 956 aa23.61■■□□□ 1.37
PRKCD-202ENST00000394729 OXER1Q8TDS5 423 aa23.61■■□□□ 1.37
PRKCD-202ENST00000394729 A0A1B0GVL5 298 aa23.6■■□□□ 1.37
PRKCD-202ENST00000394729 NBPF11Q86T75 865 aa23.6■■□□□ 1.37
PRKCD-202ENST00000394729 DDX4Q9NQI0 724 aaKnown RBP23.6■■□□□ 1.37
PRKCD-202ENST00000394729 IL17RBQ9NRM6 502 aa23.6■■□□□ 1.37
PRKCD-202ENST00000394729 SCAF8Q9UPN6 1271 aaKnown RBP23.6■■□□□ 1.37
PRKCD-202ENST00000394729 PDS5AQ29RF7 1337 aaKnown RBP23.6■■□□□ 1.37
PRKCD-202ENST00000394729 AKAP17AQ02040 695 aaKnown RBP23.6■■□□□ 1.37
PRKCD-202ENST00000394729 NFIAQ12857 509 aa23.6■■□□□ 1.37
PRKCD-202ENST00000394729 SPECC1Q5M775 1068 aa23.6■■□□□ 1.37
PRKCD-202ENST00000394729 TSPY26PQ9H489 355 aa23.6■■□□□ 1.37
PRKCD-202ENST00000394729 RHBDL3P58872 404 aa23.6■■□□□ 1.37
PRKCD-202ENST00000394729 MYSM1Q5VVJ2 828 aa23.6■■□□□ 1.37
PRKCD-202ENST00000394729 GOLPH3LQ9H4A5 285 aa23.6■■□□□ 1.37
PRKCD-202ENST00000394729 USP40Q9NVE5 1235 aa23.6■■□□□ 1.37
PRKCD-202ENST00000394729 MKRN1Q9UHC7 482 aaKnown RBP23.6■■□□□ 1.37
PRKCD-202ENST00000394729 ISY1Q9ULR0 285 aaKnown RBP23.6■■□□□ 1.37
PRKCD-202ENST00000394729 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.6■■□□□ 1.37
PRKCD-202ENST00000394729 CCDC88AQ3V6T2 1871 aa23.59■■□□□ 1.37
PRKCD-202ENST00000394729 FAM205CA6NFA0 338 aa23.59■■□□□ 1.37
PRKCD-202ENST00000394729 CCAR1Q8IX12 1150 aaKnown RBP23.59■■□□□ 1.37
PRKCD-202ENST00000394729 CRACR2BQ8N4Y2 399 aaPredicted RBP23.59■■□□□ 1.37
PRKCD-202ENST00000394729 ATP2B2Q01814 1243 aa23.59■■□□□ 1.37
PRKCD-202ENST00000394729 STAG2Q8N3U4 1231 aa23.59■■□□□ 1.37
PRKCD-202ENST00000394729 GPR75-ASB3A0A0A6YYF3 556 aa23.58■■□□□ 1.37
PRKCD-202ENST00000394729 ECE2O60344 883 aa23.58■■□□□ 1.37
PRKCD-202ENST00000394729 TROAPQ12815 778 aa23.58■■□□□ 1.36
PRKCD-202ENST00000394729 C15orf52Q6ZUT6 534 aaKnown RBP23.58■■□□□ 1.36
PRKCD-202ENST00000394729 ZFPM1Q8IX07 1006 aa23.58■■□□□ 1.36
PRKCD-202ENST00000394729 NUP62CLQ9H1M0 184 aa23.58■■□□□ 1.36
PRKCD-202ENST00000394729 MRVI1Q9Y6F6 885 aa23.58■■□□□ 1.36
PRKCD-202ENST00000394729 IFNAR1P17181 557 aa23.57■■□□□ 1.36
PRKCD-202ENST00000394729 NOM1Q5C9Z4 860 aaKnown RBP23.57■■□□□ 1.36
PRKCD-202ENST00000394729 DIS3L2Q8IYB7 885 aaKnown RBP23.57■■□□□ 1.36
PRKCD-202ENST00000394729 TBC1D22AQ8WUA7 517 aa23.57■■□□□ 1.36
PRKCD-202ENST00000394729 TNMDQ9H2S6 317 aa23.57■■□□□ 1.36
PRKCD-202ENST00000394729 PCDHA7Q9UN72 937 aa23.57■■□□□ 1.36
PRKCD-202ENST00000394729 SLX4Q8IY92 1834 aa23.57■■□□□ 1.36
PRKCD-202ENST00000394729 FMNL1O95466 1100 aaPredicted RBP23.57■■□□□ 1.36
PRKCD-202ENST00000394729 ZSCAN29Q8IWY8 852 aaPredicted RBP23.57■■□□□ 1.36
PRKCD-202ENST00000394729 ZNF396Q96N95 335 aaPredicted RBP23.57■■□□□ 1.36
PRKCD-202ENST00000394729 KAT14Q9H8E8 782 aa23.57■■□□□ 1.36
PRKCD-202ENST00000394729 ZNF277Q9NRM2 450 aaPredicted RBP23.57■■□□□ 1.36
PRKCD-202ENST00000394729 COL11A2P13942 1736 aaPredicted RBP23.56■■□□□ 1.36
PRKCD-202ENST00000394729 PPIP5K2O43314 1243 aa23.56■■□□□ 1.36
PRKCD-202ENST00000394729 RAD17O75943 681 aa23.56■■□□□ 1.36
PRKCD-202ENST00000394729 RCSD1Q6JBY9 416 aa23.56■■□□□ 1.36
PRKCD-202ENST00000394729 TMTC2Q8N394 836 aa23.56■■□□□ 1.36
PRKCD-202ENST00000394729 CTCFLQ8NI51 663 aaPredicted RBP23.56■■□□□ 1.36
PRKCD-202ENST00000394729 CDK8P49336 464 aa23.56■■□□□ 1.36
PRKCD-202ENST00000394729 SHROOM1Q2M3G4 852 aaPredicted RBP23.56■■□□□ 1.36
PRKCD-202ENST00000394729 SRBD1Q8N5C6 995 aaKnown RBP23.56■■□□□ 1.36
PRKCD-202ENST00000394729 FSIP1Q8NA03 581 aa23.56■■□□□ 1.36
PRKCD-202ENST00000394729 SHISA4Q96DD7 197 aa23.56■■□□□ 1.36
PRKCD-202ENST00000394729 VAT1LQ9HCJ6 419 aa23.56■■□□□ 1.36
PRKCD-202ENST00000394729 PNMA1Q8ND90 353 aa23.55■■□□□ 1.36
PRKCD-202ENST00000394729 GPKOWQ92917 476 aaPredicted RBP eCLIP23.55■■□□□ 1.36
PRKCD-202ENST00000394729 CLIC6Q96NY7 704 aa23.55■■□□□ 1.36
PRKCD-202ENST00000394729 DUOX1Q9NRD9 1551 aa23.55■■□□□ 1.36
PRKCD-202ENST00000394729 EYA3Q99504 573 aa23.55■■□□□ 1.36
PRKCD-202ENST00000394729 MPHOSPH10O00566 681 aaKnown RBP23.54■■□□□ 1.36
PRKCD-202ENST00000394729 DPEP1P16444 411 aa23.54■■□□□ 1.36
PRKCD-202ENST00000394729 RASA1P20936 1047 aa23.54■■□□□ 1.36
PRKCD-202ENST00000394729 HOMER1Q86YM7 354 aa23.54■■□□□ 1.36
PRKCD-202ENST00000394729 ZBTB12Q9Y330 459 aaPredicted RBP23.54■■□□□ 1.36
PRKCD-202ENST00000394729 CCDC196A0A1B0GTZ2 297 aa23.54■■□□□ 1.36
PRKCD-202ENST00000394729 ADAMTS3O15072 1205 aa23.54■■□□□ 1.36
PRKCD-202ENST00000394729 PPP4CP60510 307 aa23.54■■□□□ 1.36
PRKCD-202ENST00000394729 SBK1Q52WX2 424 aa23.53■■□□□ 1.36
PRKCD-202ENST00000394729 TMC4Q7Z404 712 aa23.53■■□□□ 1.36
PRKCD-202ENST00000394729 ANP32BQ92688 251 aaKnown RBP23.53■■□□□ 1.36
PRKCD-202ENST00000394729 CABP5Q9NP86 173 aa23.53■■□□□ 1.36
PRKCD-202ENST00000394729 TNS1Q9HBL0 1735 aaKnown RBP23.53■■□□□ 1.36
PRKCD-202ENST00000394729 ORC4O43929 436 aa23.53■■□□□ 1.36
PRKCD-202ENST00000394729 ELP1O95163 1332 aa23.53■■□□□ 1.36
PRKCD-202ENST00000394729 SPTLC2O15270 562 aa23.52■■□□□ 1.36
PRKCD-202ENST00000394729 PDIA4P13667 645 aaKnown RBP23.52■■□□□ 1.36
PRKCD-202ENST00000394729 ISM2Q6H9L7 571 aa23.52■■□□□ 1.36
PRKCD-202ENST00000394729 CDC42EP5Q6NZY7 148 aa23.52■■□□□ 1.36
PRKCD-202ENST00000394729 LRRC47Q8N1G4 583 aaKnown RBP23.52■■□□□ 1.36
PRKCD-202ENST00000394729 LINC00301Q8NCQ3 95 aa23.52■■□□□ 1.36
PRKCD-202ENST00000394729 EARS2Q5JPH6 523 aaKnown RBP23.52■■□□□ 1.36
PRKCD-202ENST00000394729 ANO1Q5XXA6 986 aa23.52■■□□□ 1.36
PRKCD-202ENST00000394729 FBXO41Q8TF61 875 aa23.52■■□□□ 1.36
PRKCD-202ENST00000394729 CNKSR1Q969H4 720 aa23.52■■□□□ 1.36
PRKCD-202ENST00000394729 TEKT1Q969V4 418 aa23.52■■□□□ 1.36
PRKCD-202ENST00000394729 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.52■■□□□ 1.36
PRKCD-202ENST00000394729 RCOR1Q9UKL0 485 aa23.52■■□□□ 1.36
PRKCD-202ENST00000394729 WDHD1O75717 1129 aaPredicted RBP23.51■■□□□ 1.35
PRKCD-202ENST00000394729 CRKP46108 304 aa23.51■■□□□ 1.35
PRKCD-202ENST00000394729 USP17L2Q6R6M4 530 aa23.51■■□□□ 1.35
PRKCD-202ENST00000394729 PSDA5PKW4 1024 aaPredicted RBP23.51■■□□□ 1.35
PRKCD-202ENST00000394729 DEXIO95424 95 aa23.51■■□□□ 1.35
PRKCD-202ENST00000394729 SAFBQ15424 915 aaKnown RBP eCLIP23.51■■□□□ 1.35
PRKCD-202ENST00000394729 CEP95Q96GE4 821 aa23.51■■□□□ 1.35
PRKCD-202ENST00000394729 USP25Q9UHP3 1055 aa23.51■■□□□ 1.35
PRKCD-202ENST00000394729 FAM205AQ6ZU69 1335 aa23.51■■□□□ 1.35
PRKCD-202ENST00000394729 NDUFA8P51970 172 aa23.51■■□□□ 1.35
PRKCD-202ENST00000394729 MAP3K11Q16584 847 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms