RNA–Protein interactions for RNA: ENST00000392023.1

SPTBN4-203, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 1 (best) BASIC

Gene SPTBN4, Length 2,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-203ENST00000392023 A0A1W2PQ64 194 aa24.54■■□□□ 1.52
SPTBN4-203ENST00000392023 A0A1W2PQD8 194 aa24.54■■□□□ 1.52
SPTBN4-203ENST00000392023 OLFM4Q6UX06 510 aa24.54■■□□□ 1.52
SPTBN4-203ENST00000392023 ZNF804AQ7Z570 1209 aa24.54■■□□□ 1.52
SPTBN4-203ENST00000392023 ARID3AQ99856 593 aa24.54■■□□□ 1.52
SPTBN4-203ENST00000392023 ATP8A2Q9NTI2 1148 aa24.54■■□□□ 1.52
SPTBN4-203ENST00000392023 VPS54Q9P1Q0 977 aa24.54■■□□□ 1.52
SPTBN4-203ENST00000392023 PDS5AQ29RF7 1337 aaKnown RBP24.54■■□□□ 1.52
SPTBN4-203ENST00000392023 STK36Q9NRP7 1315 aa24.54■■□□□ 1.52
SPTBN4-203ENST00000392023 DUOX1Q9NRD9 1551 aa24.54■■□□□ 1.52
SPTBN4-203ENST00000392023 ZNF202O95125 648 aa24.53■■□□□ 1.52
SPTBN4-203ENST00000392023 DEXIO95424 95 aa24.53■■□□□ 1.52
SPTBN4-203ENST00000392023 PFKFB1P16118 471 aa24.53■■□□□ 1.52
SPTBN4-203ENST00000392023 PTPAQ15257 358 aa24.53■■□□□ 1.52
SPTBN4-203ENST00000392023 CRY2Q49AN0 593 aa24.53■■□□□ 1.52
SPTBN4-203ENST00000392023 PPP4R3BQ5MIZ7 849 aa24.53■■□□□ 1.52
SPTBN4-203ENST00000392023 SPTY2D1Q68D10 685 aaPredicted RBP24.53■■□□□ 1.52
SPTBN4-203ENST00000392023 ISM2Q6H9L7 571 aa24.53■■□□□ 1.52
SPTBN4-203ENST00000392023 CATIPQ7Z7H3 387 aa24.53■■□□□ 1.52
SPTBN4-203ENST00000392023 NOSTRINQ8IVI9 506 aa24.53■■□□□ 1.52
SPTBN4-203ENST00000392023 WDR66Q8TBY9 1149 aa24.53■■□□□ 1.52
SPTBN4-203ENST00000392023 TGFBRAP1Q8WUH2 860 aa24.53■■□□□ 1.52
SPTBN4-203ENST00000392023 GTPBP4Q9BZE4 634 aaKnown RBP24.53■■□□□ 1.52
SPTBN4-203ENST00000392023 POLLQ9UGP5 575 aa24.53■■□□□ 1.52
SPTBN4-203ENST00000392023 BIN1O00499 593 aa24.53■■□□□ 1.52
SPTBN4-203ENST00000392023 CD209Q9NNX6 404 aa24.53■■□□□ 1.52
SPTBN4-203ENST00000392023 SAP30BPQ9UHR5 308 aaKnown RBP24.53■■□□□ 1.52
SPTBN4-203ENST00000392023 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.53■■□□□ 1.52
SPTBN4-203ENST00000392023 BRWD3Q6RI45 1802 aa24.53■■□□□ 1.52
SPTBN4-203ENST00000392023 CCDC88AQ3V6T2 1871 aa24.52■■□□□ 1.52
SPTBN4-203ENST00000392023 POLRMTO00411 1230 aaKnown RBP24.52■■□□□ 1.52
SPTBN4-203ENST00000392023 KIF20AO95235 890 aa24.52■■□□□ 1.52
SPTBN4-203ENST00000392023 FGRP09769 529 aa24.52■■□□□ 1.52
SPTBN4-203ENST00000392023 TOB1P50616 345 aaPredicted RBP24.52■■□□□ 1.52
SPTBN4-203ENST00000392023 TROAPQ12815 778 aa24.52■■□□□ 1.52
SPTBN4-203ENST00000392023 SLC27A3Q5K4L6 730 aa24.52■■□□□ 1.52
SPTBN4-203ENST00000392023 WASF1Q92558 559 aa24.52■■□□□ 1.52
SPTBN4-203ENST00000392023 RBM17Q96I25 401 aaKnown RBP24.52■■□□□ 1.52
SPTBN4-203ENST00000392023 TSPY2A6NKD2 308 aa24.52■■□□□ 1.52
SPTBN4-203ENST00000392023 C6orf229H3BNL8 230 aa24.52■■□□□ 1.52
SPTBN4-203ENST00000392023 CTAGE5O15320 804 aa24.52■■□□□ 1.52
SPTBN4-203ENST00000392023 C17orf53Q8N3J3 647 aaPredicted RBP24.52■■□□□ 1.52
SPTBN4-203ENST00000392023 GGA1Q9UJY5 639 aa24.52■■□□□ 1.52
SPTBN4-203ENST00000392023 MTMR7Q9Y216 660 aa24.52■■□□□ 1.52
SPTBN4-203ENST00000392023 SAFBQ15424 915 aaKnown RBP eCLIP24.51■■□□□ 1.51
SPTBN4-203ENST00000392023 SHC4Q6S5L8 630 aa24.51■■□□□ 1.51
SPTBN4-203ENST00000392023 FAM205CA6NFA0 338 aa24.51■■□□□ 1.51
SPTBN4-203ENST00000392023 RIMBP2O15034 1052 aa24.51■■□□□ 1.51
SPTBN4-203ENST00000392023 MAPKAPK5Q8IW41 473 aa24.51■■□□□ 1.51
SPTBN4-203ENST00000392023 SLC44A5Q8NCS7 719 aa24.51■■□□□ 1.51
SPTBN4-203ENST00000392023 MTA3Q9BTC8 594 aa24.51■■□□□ 1.51
SPTBN4-203ENST00000392023 AKAP17AQ02040 695 aaKnown RBP24.5■■□□□ 1.51
SPTBN4-203ENST00000392023 GRIN1Q05586 938 aa24.5■■□□□ 1.51
SPTBN4-203ENST00000392023 PKN1Q16512 942 aa24.5■■□□□ 1.51
SPTBN4-203ENST00000392023 TRIM5Q9C035 493 aa24.5■■□□□ 1.51
SPTBN4-203ENST00000392023 NID2Q14112 1375 aa24.5■■□□□ 1.51
SPTBN4-203ENST00000392023 ZNF827Q17R98 1081 aa24.5■■□□□ 1.51
SPTBN4-203ENST00000392023 KLHL34Q8N239 644 aa24.5■■□□□ 1.51
SPTBN4-203ENST00000392023 CABP5Q9NP86 173 aa24.5■■□□□ 1.51
SPTBN4-203ENST00000392023 ARPP21Q9UBL0 812 aaPredicted RBP24.5■■□□□ 1.51
SPTBN4-203ENST00000392023 VEGFAP15692 232 aaPredicted RBP24.49■■□□□ 1.51
SPTBN4-203ENST00000392023 CMA1P23946 247 aa24.49■■□□□ 1.51
SPTBN4-203ENST00000392023 PLCD1P51178 756 aa24.49■■□□□ 1.51
SPTBN4-203ENST00000392023 IQCB1Q15051 598 aa24.49■■□□□ 1.51
SPTBN4-203ENST00000392023 STX1AQ16623 288 aa24.49■■□□□ 1.51
SPTBN4-203ENST00000392023 PCDHB6Q9Y5E3 794 aa24.49■■□□□ 1.51
SPTBN4-203ENST00000392023 TFAP4Q01664 338 aa24.49■■□□□ 1.51
SPTBN4-203ENST00000392023 PDE4BQ07343 736 aa24.49■■□□□ 1.51
SPTBN4-203ENST00000392023 FUT2Q10981 343 aa24.49■■□□□ 1.51
SPTBN4-203ENST00000392023 EARS2Q5JPH6 523 aaKnown RBP24.48■■□□□ 1.51
SPTBN4-203ENST00000392023 TBC1D16Q8TBP0 767 aa24.48■■□□□ 1.51
SPTBN4-203ENST00000392023 MKRN1Q9UHC7 482 aaKnown RBP24.48■■□□□ 1.51
SPTBN4-203ENST00000392023 NOM1Q5C9Z4 860 aaKnown RBP24.47■■□□□ 1.51
SPTBN4-203ENST00000392023 SRBD1Q8N5C6 995 aaKnown RBP24.47■■□□□ 1.51
SPTBN4-203ENST00000392023 KIAA1468Q9P260 1216 aa24.47■■□□□ 1.51
SPTBN4-203ENST00000392023 NRBP1Q9UHY1 535 aa24.47■■□□□ 1.51
SPTBN4-203ENST00000392023 MYH6P13533 1939 aa24.47■■□□□ 1.51
SPTBN4-203ENST00000392023 USP17L3A6NCW0 530 aa24.47■■□□□ 1.51
SPTBN4-203ENST00000392023 USP17L4A6NCW7 530 aa24.47■■□□□ 1.51
SPTBN4-203ENST00000392023 ORC4O43929 436 aa24.47■■□□□ 1.51
SPTBN4-203ENST00000392023 SLC3A2P08195 630 aaKnown RBP24.47■■□□□ 1.51
SPTBN4-203ENST00000392023 C12orf60Q5U649 245 aa24.47■■□□□ 1.51
SPTBN4-203ENST00000392023 USP17L1Q7RTZ2 530 aa24.47■■□□□ 1.51
SPTBN4-203ENST00000392023 DRC7Q8IY82 874 aa24.47■■□□□ 1.51
SPTBN4-203ENST00000392023 SYKP43405 635 aa24.46■■□□□ 1.51
SPTBN4-203ENST00000392023 SBK1Q52WX2 424 aa24.46■■□□□ 1.51
SPTBN4-203ENST00000392023 MFSD14BQ5SR56 506 aa24.46■■□□□ 1.51
SPTBN4-203ENST00000392023 AEBP2Q6ZN18 517 aaPredicted RBP24.46■■□□□ 1.51
SPTBN4-203ENST00000392023 RNF26Q9BY78 433 aaPredicted RBP24.46■■□□□ 1.51
SPTBN4-203ENST00000392023 IL17RBQ9NRM6 502 aa24.46■■□□□ 1.51
SPTBN4-203ENST00000392023 ATP2B4P23634 1241 aa24.46■■□□□ 1.51
SPTBN4-203ENST00000392023 DPCR1Q3MIW9 517 aa24.46■■□□□ 1.51
SPTBN4-203ENST00000392023 MKNK2Q9HBH9 465 aa24.46■■□□□ 1.51
SPTBN4-203ENST00000392023 GOLGA6L19H0YKK7 550 aa24.45■■□□□ 1.51
SPTBN4-203ENST00000392023 PPP6R2O75170 966 aa24.45■■□□□ 1.51
SPTBN4-203ENST00000392023 BTDP43251 543 aa24.45■■□□□ 1.51
SPTBN4-203ENST00000392023 RCSD1Q6JBY9 416 aa24.45■■□□□ 1.51
SPTBN4-203ENST00000392023 COL23A1Q86Y22 540 aaPredicted RBP24.45■■□□□ 1.51
SPTBN4-203ENST00000392023 BECN2A8MW95 431 aa24.45■■□□□ 1.5
SPTBN4-203ENST00000392023 F8W031 263 aaPredicted RBP24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms