RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 ZSCAN10Q96SZ4 725 aaPredicted RBP12.13□□□□□ -0.47
POLR2J3-201ENST00000379340 SLC26A6Q9BXS9 759 aa12.13□□□□□ -0.47
POLR2J3-201ENST00000379340 INCENPQ9NQS7 918 aa12.13□□□□□ -0.47
POLR2J3-201ENST00000379340 RBM28Q9NW13 759 aaKnown RBP12.13□□□□□ -0.47
POLR2J3-201ENST00000379340 PIM2Q9P1W9 311 aa12.13□□□□□ -0.47
POLR2J3-201ENST00000379340 ANKIB1Q9P2G1 1089 aa12.13□□□□□ -0.47
POLR2J3-201ENST00000379340 USP25Q9UHP3 1055 aa12.13□□□□□ -0.47
POLR2J3-201ENST00000379340 ZKSCAN5Q9Y2L8 839 aa12.13□□□□□ -0.47
POLR2J3-201ENST00000379340 MYH6P13533 1939 aa12.12□□□□□ -0.47
POLR2J3-201ENST00000379340 MYH2Q9UKX2 1941 aa12.12□□□□□ -0.47
POLR2J3-201ENST00000379340 TNKSO95271 1327 aa12.12□□□□□ -0.47
POLR2J3-201ENST00000379340 WTIPA6NIX2 430 aaPredicted RBP12.12□□□□□ -0.47
POLR2J3-201ENST00000379340 KIF28PB7ZC32 967 aa12.12□□□□□ -0.47
POLR2J3-201ENST00000379340 PPFIA3O75145 1194 aa12.12□□□□□ -0.47
POLR2J3-201ENST00000379340 DDAH1O94760 285 aa12.12□□□□□ -0.47
POLR2J3-201ENST00000379340 ADCY5O95622 1261 aa12.12□□□□□ -0.47
POLR2J3-201ENST00000379340 POLR3DP05423 398 aaPredicted RBP12.12□□□□□ -0.47
POLR2J3-201ENST00000379340 PTMAP06454 111 aaKnown RBP12.12□□□□□ -0.47
POLR2J3-201ENST00000379340 TPM3P06753 285 aa12.12□□□□□ -0.47
POLR2J3-201ENST00000379340 LDHCP07864 332 aa12.12□□□□□ -0.47
POLR2J3-201ENST00000379340 RXRAP19793 462 aa12.12□□□□□ -0.47
POLR2J3-201ENST00000379340 CHAF1AQ13111 956 aaPredicted RBP12.12□□□□□ -0.47
POLR2J3-201ENST00000379340 SNW1Q13573 536 aaKnown RBP12.12□□□□□ -0.47
POLR2J3-201ENST00000379340 SLC39A14Q15043 492 aa12.12□□□□□ -0.47
POLR2J3-201ENST00000379340 STX1AQ16623 288 aa12.12□□□□□ -0.47
POLR2J3-201ENST00000379340 DALRD3Q5D0E6 543 aaKnown RBP12.12□□□□□ -0.47
POLR2J3-201ENST00000379340 CKAP2LQ8IYA6 745 aa12.12□□□□□ -0.47
POLR2J3-201ENST00000379340 FANCBQ8NB91 859 aa12.12□□□□□ -0.47
POLR2J3-201ENST00000379340 PHKBQ93100 1093 aa12.12□□□□□ -0.47
POLR2J3-201ENST00000379340 RNF26Q9BY78 433 aaPredicted RBP12.12□□□□□ -0.47
POLR2J3-201ENST00000379340 FTOQ9C0B1 505 aaKnown RBP eCLIP12.12□□□□□ -0.47
POLR2J3-201ENST00000379340 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.12□□□□□ -0.47
POLR2J3-201ENST00000379340 CLIC4Q9Y696 253 aa12.12□□□□□ -0.47
POLR2J3-201ENST00000379340 PARP3Q9Y6F1 533 aa12.12□□□□□ -0.47
POLR2J3-201ENST00000379340 ZNF500O60304 480 aaPredicted RBP12.11□□□□□ -0.47
POLR2J3-201ENST00000379340 BBOX1O75936 387 aa12.11□□□□□ -0.47
POLR2J3-201ENST00000379340 SERPINB2P05120 415 aa12.11□□□□□ -0.47
POLR2J3-201ENST00000379340 XBP1P17861 261 aa12.11□□□□□ -0.47
POLR2J3-201ENST00000379340 PDE4BQ07343 736 aa12.11□□□□□ -0.47
POLR2J3-201ENST00000379340 ANO6Q4KMQ2 910 aa12.11□□□□□ -0.47
POLR2J3-201ENST00000379340 CCDC178Q5BJE1 867 aa12.11□□□□□ -0.47
POLR2J3-201ENST00000379340 CATIPQ7Z7H3 387 aa12.11□□□□□ -0.47
POLR2J3-201ENST00000379340 CCDC144CPQ8IYA2 1237 aa12.11□□□□□ -0.47
POLR2J3-201ENST00000379340 CCDC24Q8N4L8 307 aa12.11□□□□□ -0.47
POLR2J3-201ENST00000379340 CRACR2BQ8N4Y2 399 aaPredicted RBP12.11□□□□□ -0.47
POLR2J3-201ENST00000379340 MYL10Q9BUA6 226 aa12.11□□□□□ -0.47
POLR2J3-201ENST00000379340 GOLPH3LQ9H4A5 285 aa12.11□□□□□ -0.47
POLR2J3-201ENST00000379340 DCP1AQ9NPI6 582 aaPredicted RBP12.11□□□□□ -0.47
POLR2J3-201ENST00000379340 NAV1Q8NEY1 1877 aa12.11□□□□□ -0.47
POLR2J3-201ENST00000379340 GOLGA6L6A8MZA4 724 aa12.1□□□□□ -0.47
POLR2J3-201ENST00000379340 BAG3O95817 575 aa12.1□□□□□ -0.47
POLR2J3-201ENST00000379340 MMP1P03956 469 aa12.1□□□□□ -0.47
POLR2J3-201ENST00000379340 LDHBP07195 334 aaKnown RBP12.1□□□□□ -0.47
POLR2J3-201ENST00000379340 KCNA4P22459 653 aa12.1□□□□□ -0.47
POLR2J3-201ENST00000379340 CMA1P23946 247 aa12.1□□□□□ -0.47
POLR2J3-201ENST00000379340 PRDX5P30044 214 aa12.1□□□□□ -0.47
POLR2J3-201ENST00000379340 HOXA10P31260 410 aaPredicted RBP12.1□□□□□ -0.47
POLR2J3-201ENST00000379340 IFIT1BQ5T764 474 aaKnown RBP12.1□□□□□ -0.47
POLR2J3-201ENST00000379340 NBPF11Q86T75 865 aa12.1□□□□□ -0.47
POLR2J3-201ENST00000379340 AMOTL1Q8IY63 956 aa12.1□□□□□ -0.47
POLR2J3-201ENST00000379340 FMR1NBQ8N0W7 255 aaPredicted RBP12.1□□□□□ -0.47
POLR2J3-201ENST00000379340 CRAMP1Q96RY5 1269 aa12.1□□□□□ -0.47
POLR2J3-201ENST00000379340 ZKSCAN3Q9BRR0 538 aa12.1□□□□□ -0.47
POLR2J3-201ENST00000379340 NOL10Q9BSC4 688 aaKnown RBP12.1□□□□□ -0.47
POLR2J3-201ENST00000379340 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.1□□□□□ -0.47
POLR2J3-201ENST00000379340 FOXP1Q9H334 677 aaPredicted RBP12.1□□□□□ -0.47
POLR2J3-201ENST00000379340 AATFQ9NY61 560 aaKnown RBP eCLIP12.1□□□□□ -0.47
POLR2J3-201ENST00000379340 PODXL2Q9NZ53 605 aa12.1□□□□□ -0.47
POLR2J3-201ENST00000379340 USP17L12C9JPN9 530 aa12.09□□□□□ -0.47
POLR2J3-201ENST00000379340 USP17L21D6R901 530 aa12.09□□□□□ -0.47
POLR2J3-201ENST00000379340 PPP4CP60510 307 aa12.09□□□□□ -0.47
POLR2J3-201ENST00000379340 AKAP17AQ02040 695 aaKnown RBP12.09□□□□□ -0.47
POLR2J3-201ENST00000379340 TXNRD3Q86VQ6 643 aa12.09□□□□□ -0.47
POLR2J3-201ENST00000379340 ENAHQ8N8S7 591 aaPredicted RBP12.09□□□□□ -0.47
POLR2J3-201ENST00000379340 TIGD1Q96MW7 591 aa12.09□□□□□ -0.47
POLR2J3-201ENST00000379340 AIFM3Q96NN9 605 aa12.09□□□□□ -0.47
POLR2J3-201ENST00000379340 CBX8Q9HC52 389 aa12.09□□□□□ -0.47
POLR2J3-201ENST00000379340 ANO10Q9NW15 660 aa12.09□□□□□ -0.47
POLR2J3-201ENST00000379340 MORC2Q9Y6X9 1032 aaPredicted RBP12.09□□□□□ -0.47
POLR2J3-201ENST00000379340 ROBO3Q96MS0 1386 aa12.09□□□□□ -0.47
POLR2J3-201ENST00000379340 NRXN2Q9P2S2 1712 aa12.09□□□□□ -0.47
POLR2J3-201ENST00000379340 FAM237AA0A1B0GTK4 181 aa12.09□□□□□ -0.47
POLR2J3-201ENST00000379340 KLRG2A4D1S0 409 aaPredicted RBP12.09□□□□□ -0.47
POLR2J3-201ENST00000379340 POTECB2RU33 542 aa12.09□□□□□ -0.47
POLR2J3-201ENST00000379340 PRPF3O43395 683 aaKnown RBP12.09□□□□□ -0.47
POLR2J3-201ENST00000379340 SLC34A2O95436 690 aa12.09□□□□□ -0.47
POLR2J3-201ENST00000379340 ZNF165P49910 485 aa12.09□□□□□ -0.47
POLR2J3-201ENST00000379340 RILPL1Q5EBL4 403 aa12.09□□□□□ -0.47
POLR2J3-201ENST00000379340 NOSTRINQ8IVI9 506 aa12.09□□□□□ -0.47
POLR2J3-201ENST00000379340 NUP133Q8WUM0 1156 aa12.09□□□□□ -0.47
POLR2J3-201ENST00000379340 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.09□□□□□ -0.47
POLR2J3-201ENST00000379340 GGA1Q9UJY5 639 aa12.09□□□□□ -0.47
POLR2J3-201ENST00000379340 LTBP1Q14766 1721 aa12.08□□□□□ -0.48
POLR2J3-201ENST00000379340 CUTAO60888 179 aa12.08□□□□□ -0.48
POLR2J3-201ENST00000379340 IL1R1P14778 569 aa12.08□□□□□ -0.48
POLR2J3-201ENST00000379340 GPSM2P81274 684 aa12.08□□□□□ -0.48
POLR2J3-201ENST00000379340 PTPAQ15257 358 aa12.08□□□□□ -0.48
POLR2J3-201ENST00000379340 AXDND1Q5T1B0 1012 aaPredicted RBP12.08□□□□□ -0.48
POLR2J3-201ENST00000379340 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.08□□□□□ -0.48
POLR2J3-201ENST00000379340 SLF2Q8IX21 1173 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms