RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 SCAPERQ9BY12 1400 aa7.31□□□□□ -1.24
UBR4-204ENST00000375254 TBC1D8BQ0IIM8 1120 aa7.31□□□□□ -1.24
UBR4-204ENST00000375254 SNX1Q13596 522 aa7.31□□□□□ -1.24
UBR4-204ENST00000375254 BZW2Q9Y6E2 419 aaKnown RBP7.31□□□□□ -1.24
UBR4-204ENST00000375254 ACADSP16219 412 aa7.31□□□□□ -1.24
UBR4-204ENST00000375254 PHKBQ93100 1093 aa7.31□□□□□ -1.24
UBR4-204ENST00000375254 ZHX3Q9H4I2 956 aa7.31□□□□□ -1.24
UBR4-204ENST00000375254 FOXD1Q16676 465 aa7.31□□□□□ -1.24
UBR4-204ENST00000375254 PBKQ96KB5 322 aa7.31□□□□□ -1.24
UBR4-204ENST00000375254 S100A1P23297 94 aa7.31□□□□□ -1.24
UBR4-204ENST00000375254 HNRNPH1P31943 449 aaKnown RBP7.31□□□□□ -1.24
UBR4-204ENST00000375254 FERMT3Q86UX7 667 aa7.31□□□□□ -1.24
UBR4-204ENST00000375254 MRGBPQ9NV56 204 aa7.31□□□□□ -1.24
UBR4-204ENST00000375254 PTPRCP08575 1304 aa7.31□□□□□ -1.24
UBR4-204ENST00000375254 ADCY2Q08462 1091 aa7.31□□□□□ -1.24
UBR4-204ENST00000375254 CCDC184Q52MB2 194 aa7.31□□□□□ -1.24
UBR4-204ENST00000375254 SDCCAG3Q96C92 435 aa7.31□□□□□ -1.24
UBR4-204ENST00000375254 DNAJC17Q9NVM6 304 aaKnown RBP7.31□□□□□ -1.24
UBR4-204ENST00000375254 CEP126Q9P2H0 1117 aa7.31□□□□□ -1.24
UBR4-204ENST00000375254 SSX2IPQ9Y2D8 614 aa7.31□□□□□ -1.24
UBR4-204ENST00000375254 ZNF644Q9H582 1327 aaPredicted RBP7.31□□□□□ -1.24
UBR4-204ENST00000375254 MCF2P10911 925 aa7.31□□□□□ -1.24
UBR4-204ENST00000375254 RRAGBQ5VZM2 374 aa7.31□□□□□ -1.24
UBR4-204ENST00000375254 CUL5Q93034 780 aa7.31□□□□□ -1.24
UBR4-204ENST00000375254 ZKSCAN3Q9BRR0 538 aa7.31□□□□□ -1.24
UBR4-204ENST00000375254 NUGGCQ68CJ6 796 aa7.3□□□□□ -1.24
UBR4-204ENST00000375254 TRIM15Q9C019 465 aa7.3□□□□□ -1.24
UBR4-204ENST00000375254 CASP8Q14790 479 aa7.3□□□□□ -1.24
UBR4-204ENST00000375254 ANKRD7Q92527 254 aa7.3□□□□□ -1.24
UBR4-204ENST00000375254 TRIM47Q96LD4 638 aa7.3□□□□□ -1.24
UBR4-204ENST00000375254 IPO5O00410 1097 aaKnown RBP7.3□□□□□ -1.24
UBR4-204ENST00000375254 HSPA1LP34931 641 aa7.3□□□□□ -1.24
UBR4-204ENST00000375254 EPHB4P54760 987 aa7.3□□□□□ -1.24
UBR4-204ENST00000375254 C10orf76Q5T2E6 689 aa7.3□□□□□ -1.24
UBR4-204ENST00000375254 C17orf50Q8WW18 174 aa7.3□□□□□ -1.24
UBR4-204ENST00000375254 FAM96AQ9H5X1 160 aa7.3□□□□□ -1.24
UBR4-204ENST00000375254 NFE2L2Q16236 605 aa7.3□□□□□ -1.24
UBR4-204ENST00000375254 CLEC17AQ6ZS10 378 aa7.3□□□□□ -1.24
UBR4-204ENST00000375254 LRPPRCP42704 1394 aaKnown RBP7.3□□□□□ -1.24
UBR4-204ENST00000375254 GJA8P48165 433 aa7.3□□□□□ -1.24
UBR4-204ENST00000375254 MKRN3Q13064 507 aaKnown RBP7.3□□□□□ -1.24
UBR4-204ENST00000375254 SESTD1Q86VW0 696 aa7.3□□□□□ -1.24
UBR4-204ENST00000375254 ATP11BQ9Y2G3 1177 aa7.3□□□□□ -1.24
UBR4-204ENST00000375254 TTC4O95801 387 aa7.3□□□□□ -1.24
UBR4-204ENST00000375254 PLCD1P51178 756 aa7.3□□□□□ -1.24
UBR4-204ENST00000375254 PDE1BQ01064 536 aa7.3□□□□□ -1.24
UBR4-204ENST00000375254 QKIQ96PU8 341 aaKnown RBP eCLIP7.3□□□□□ -1.246e-6■■■■□ 20.5
UBR4-204ENST00000375254 RMI1Q9H9A7 625 aa7.3□□□□□ -1.24
UBR4-204ENST00000375254 GMEB1Q9Y692 573 aa7.3□□□□□ -1.24
UBR4-204ENST00000375254 RASGRF1Q13972 1273 aa7.3□□□□□ -1.24
UBR4-204ENST00000375254 POLD1P28340 1107 aa7.3□□□□□ -1.24
UBR4-204ENST00000375254 NLRP12P59046 1061 aa7.3□□□□□ -1.24
UBR4-204ENST00000375254 NNTQ13423 1086 aa7.3□□□□□ -1.24
UBR4-204ENST00000375254 TMTC3Q6ZXV5 915 aa7.3□□□□□ -1.24
UBR4-204ENST00000375254 TBCAO75347 108 aaKnown RBP7.3□□□□□ -1.24
UBR4-204ENST00000375254 ECE1P42892 770 aa7.3□□□□□ -1.24
UBR4-204ENST00000375254 USP5P45974 858 aa7.3□□□□□ -1.24
UBR4-204ENST00000375254 GNAQP50148 359 aa7.3□□□□□ -1.24
UBR4-204ENST00000375254 MYCNP04198 464 aaPredicted RBP7.3□□□□□ -1.24
UBR4-204ENST00000375254 DNM1Q05193 864 aaKnown RBP7.3□□□□□ -1.24
UBR4-204ENST00000375254 TRIML1Q8N9V2 468 aa7.3□□□□□ -1.24
UBR4-204ENST00000375254 FAM81AQ8TBF8 368 aa7.3□□□□□ -1.24
UBR4-204ENST00000375254 TTC1Q99614 292 aa7.3□□□□□ -1.24
UBR4-204ENST00000375254 COQ7Q99807 217 aa7.3□□□□□ -1.24
UBR4-204ENST00000375254 ZMYND8Q9ULU4 1186 aaPredicted RBP7.3□□□□□ -1.24
UBR4-204ENST00000375254 IARSP41252 1262 aaKnown RBP7.3□□□□□ -1.24
UBR4-204ENST00000375254 AP2B1P63010 937 aa7.3□□□□□ -1.24
UBR4-204ENST00000375254 KRI1Q8N9T8 703 aaKnown RBP7.3□□□□□ -1.24
UBR4-204ENST00000375254 ST13P5Q8NFI4 369 aaPredicted RBP7.3□□□□□ -1.24
UBR4-204ENST00000375254 RWDD3Q9Y3V2 267 aa7.3□□□□□ -1.24
UBR4-204ENST00000375254 PPIP5K2O43314 1243 aa7.3□□□□□ -1.24
UBR4-204ENST00000375254 KRT80Q6KB66 452 aa7.3□□□□□ -1.24
UBR4-204ENST00000375254 MAK16Q9BXY0 300 aaKnown RBP7.3□□□□□ -1.24
UBR4-204ENST00000375254 DBNLQ9UJU6 430 aaKnown RBP7.3□□□□□ -1.24
UBR4-204ENST00000375254 PACSIN2Q9UNF0 486 aaPredicted RBP7.3□□□□□ -1.24
UBR4-204ENST00000375254 PPP2R5BQ15173 497 aa7.3□□□□□ -1.24
UBR4-204ENST00000375254 LRRC8CQ8TDW0 803 aa7.3□□□□□ -1.24
UBR4-204ENST00000375254 CARD10Q9BWT7 1032 aa7.3□□□□□ -1.24
UBR4-204ENST00000375254 ATAD3AQ9NVI7 634 aa7.3□□□□□ -1.24
UBR4-204ENST00000375254 CYTH3O43739 400 aa7.29□□□□□ -1.24
UBR4-204ENST00000375254 PPP4R3AQ6IN85 833 aa7.29□□□□□ -1.24
UBR4-204ENST00000375254 LRGUKQ96M69 825 aa7.29□□□□□ -1.24
UBR4-204ENST00000375254 ECHDC1Q9NTX5 307 aa7.29□□□□□ -1.24
UBR4-204ENST00000375254 ARL2BPQ9Y2Y0 163 aa7.29□□□□□ -1.24
UBR4-204ENST00000375254 DDHD1Q8NEL9 900 aa7.29□□□□□ -1.24
UBR4-204ENST00000375254 CASP10Q92851 521 aa7.29□□□□□ -1.24
UBR4-204ENST00000375254 CALML3P27482 149 aa7.29□□□□□ -1.24
UBR4-204ENST00000375254 DDX42Q86XP3 938 aaKnown RBP eCLIP7.29□□□□□ -1.24
UBR4-204ENST00000375254 RAD21L1Q9H4I0 556 aa7.29□□□□□ -1.24
UBR4-204ENST00000375254 PPP2R2CQ9Y2T4 447 aa7.29□□□□□ -1.24
UBR4-204ENST00000375254 CTIFO43310 598 aaKnown RBP7.29□□□□□ -1.24
UBR4-204ENST00000375254 PLCB3Q01970 1234 aa7.29□□□□□ -1.24
UBR4-204ENST00000375254 TTLL7Q6ZT98 887 aa7.29□□□□□ -1.24
UBR4-204ENST00000375254 ANKRD36BQ8N2N9 1353 aa7.29□□□□□ -1.24
UBR4-204ENST00000375254 ZNF213O14771 459 aa7.29□□□□□ -1.24
UBR4-204ENST00000375254 TTI1O43156 1089 aa7.29□□□□□ -1.24
UBR4-204ENST00000375254 PSMC1P62191 440 aaKnown RBP7.29□□□□□ -1.24
UBR4-204ENST00000375254 ITIH3Q06033 890 aa7.29□□□□□ -1.24
UBR4-204ENST00000375254 RILPL1Q5EBL4 403 aa7.29□□□□□ -1.24
UBR4-204ENST00000375254 AATFQ9NY61 560 aaKnown RBP eCLIP7.29□□□□□ -1.248e-7■■□□□ 12.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms