RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 FAM207AQ9NSI2 230 aaPredicted RBP26.65■■□□□ 1.86
RAPGEF1-203ENST00000372195 HERC4Q5GLZ8 1057 aaPredicted RBP26.65■■□□□ 1.86
RAPGEF1-203ENST00000372195 CABP7Q86V35 215 aa26.65■■□□□ 1.86
RAPGEF1-203ENST00000372195 RDH13Q8NBN7 331 aa26.65■■□□□ 1.86
RAPGEF1-203ENST00000372195 HINFPQ9BQA5 517 aa26.65■■□□□ 1.86
RAPGEF1-203ENST00000372195 UBAP1LF5GYI3 381 aa26.65■■□□□ 1.86
RAPGEF1-203ENST00000372195 GSPT1P15170 499 aaKnown RBP26.65■■□□□ 1.86
RAPGEF1-203ENST00000372195 TGFBRAP1Q8WUH2 860 aa26.65■■□□□ 1.86
RAPGEF1-203ENST00000372195 CTTNBP2NLQ9P2B4 639 aa26.65■■□□□ 1.86
RAPGEF1-203ENST00000372195 LRWD1Q9UFC0 647 aa26.65■■□□□ 1.86
RAPGEF1-203ENST00000372195 GINS2Q9Y248 185 aa26.65■■□□□ 1.86
RAPGEF1-203ENST00000372195 TRPM2O94759 1503 aa26.65■■□□□ 1.86
RAPGEF1-203ENST00000372195 STX10O60499 249 aa26.65■■□□□ 1.86
RAPGEF1-203ENST00000372195 HSPA1LP34931 641 aa26.65■■□□□ 1.86
RAPGEF1-203ENST00000372195 CALCRLQ16602 461 aa26.65■■□□□ 1.86
RAPGEF1-203ENST00000372195 MGARPQ8TDB4 240 aa26.65■■□□□ 1.86
RAPGEF1-203ENST00000372195 IFT20Q8IY31 132 aa26.65■■□□□ 1.86
RAPGEF1-203ENST00000372195 STMN2Q93045 179 aa26.65■■□□□ 1.86
RAPGEF1-203ENST00000372195 COBLO75128 1261 aa26.64■■□□□ 1.86
RAPGEF1-203ENST00000372195 KBTBD3Q8NAB2 608 aa26.64■■□□□ 1.86
RAPGEF1-203ENST00000372195 SORBS3O60504 671 aa26.64■■□□□ 1.86
RAPGEF1-203ENST00000372195 CNBD1Q8NA66 436 aa26.64■■□□□ 1.86
RAPGEF1-203ENST00000372195 DESI2Q9BSY9 194 aa26.64■■□□□ 1.86
RAPGEF1-203ENST00000372195 NUP153P49790 1475 aaKnown RBP26.64■■□□□ 1.86
RAPGEF1-203ENST00000372195 ZNF131P52739 623 aa26.64■■□□□ 1.86
RAPGEF1-203ENST00000372195 KSR1Q8IVT5 923 aa26.64■■□□□ 1.86
RAPGEF1-203ENST00000372195 GPR161Q8N6U8 529 aaKnown RBP26.64■■□□□ 1.86
RAPGEF1-203ENST00000372195 RNF34Q969K3 372 aa26.64■■□□□ 1.86
RAPGEF1-203ENST00000372195 FAM204AQ9H8W3 233 aa26.64■■□□□ 1.86
RAPGEF1-203ENST00000372195 SDAD1Q9NVU7 687 aaKnown RBP eCLIP26.64■■□□□ 1.858e-8■□□□□ 9.9
RAPGEF1-203ENST00000372195 ARHGAP44Q17R89 818 aa26.64■■□□□ 1.85
RAPGEF1-203ENST00000372195 MLKLQ8NB16 471 aa26.64■■□□□ 1.85
RAPGEF1-203ENST00000372195 NLRC4Q9NPP4 1024 aa26.64■■□□□ 1.85
RAPGEF1-203ENST00000372195 VWA3BQ502W6 1294 aa26.63■■□□□ 1.85
RAPGEF1-203ENST00000372195 ARHGEF35A5YM69 484 aa26.63■■□□□ 1.85
RAPGEF1-203ENST00000372195 GOLGA6BA6NDN3 693 aa26.63■■□□□ 1.85
RAPGEF1-203ENST00000372195 STIM2Q9P246 746 aa26.63■■□□□ 1.85
RAPGEF1-203ENST00000372195 PRKG1Q13976 671 aa26.63■■□□□ 1.85
RAPGEF1-203ENST00000372195 ASIC3Q9UHC3 531 aa26.63■■□□□ 1.85
RAPGEF1-203ENST00000372195 CETN3O15182 167 aa26.63■■□□□ 1.85
RAPGEF1-203ENST00000372195 CIB2O75838 187 aa26.63■■□□□ 1.85
RAPGEF1-203ENST00000372195 ADCY7P51828 1080 aa26.63■■□□□ 1.85
RAPGEF1-203ENST00000372195 ATP11AP98196 1134 aa26.63■■□□□ 1.85
RAPGEF1-203ENST00000372195 UBL4BQ8N7F7 174 aa26.63■■□□□ 1.85
RAPGEF1-203ENST00000372195 MRPL44Q9H9J2 332 aaKnown RBP26.63■■□□□ 1.85
RAPGEF1-203ENST00000372195 BUB1BO60566 1050 aaPredicted RBP26.62■■□□□ 1.85
RAPGEF1-203ENST00000372195 SMTNP53814 917 aa26.62■■□□□ 1.85
RAPGEF1-203ENST00000372195 ZNF365Q70YC5 407 aa26.62■■□□□ 1.85
RAPGEF1-203ENST00000372195 COL17A1Q9UMD9 1497 aaPredicted RBP26.62■■□□□ 1.85
RAPGEF1-203ENST00000372195 PPP2R5CQ13362 524 aa26.62■■□□□ 1.85
RAPGEF1-203ENST00000372195 RRAGAQ7L523 313 aa26.62■■□□□ 1.85
RAPGEF1-203ENST00000372195 SLC9C1Q4G0N8 1177 aa26.62■■□□□ 1.85
RAPGEF1-203ENST00000372195 JDP2Q8WYK2 163 aa26.62■■□□□ 1.85
RAPGEF1-203ENST00000372195 IMPACTQ9P2X3 320 aa26.62■■□□□ 1.85
RAPGEF1-203ENST00000372195 INPP5BP32019 993 aa26.62■■□□□ 1.85
RAPGEF1-203ENST00000372195 MAGEA1P43355 309 aa26.62■■□□□ 1.85
RAPGEF1-203ENST00000372195 SND1Q7KZF4 910 aaKnown RBP eCLIP26.62■■□□□ 1.85
RAPGEF1-203ENST00000372195 GUCY2FP51841 1108 aa26.62■■□□□ 1.85
RAPGEF1-203ENST00000372195 TRPC3Q13507 836 aa26.61■■□□□ 1.85
RAPGEF1-203ENST00000372195 EYA3Q99504 573 aa26.61■■□□□ 1.85
RAPGEF1-203ENST00000372195 NAP1L4Q99733 375 aaKnown RBP26.61■■□□□ 1.85
RAPGEF1-203ENST00000372195 PALD1Q9ULE6 856 aa26.61■■□□□ 1.85
RAPGEF1-203ENST00000372195 HAUS3Q68CZ6 603 aa26.61■■□□□ 1.85
RAPGEF1-203ENST00000372195 SLC52A2Q9HAB3 445 aa26.61■■□□□ 1.85
RAPGEF1-203ENST00000372195 GKAP1Q5VSY0 366 aaPredicted RBP26.61■■□□□ 1.85
RAPGEF1-203ENST00000372195 WDR70Q9NW82 654 aa26.61■■□□□ 1.85
RAPGEF1-203ENST00000372195 CHL1O00533 1208 aa26.61■■□□□ 1.85
RAPGEF1-203ENST00000372195 STRN3Q13033 797 aa26.61■■□□□ 1.85
RAPGEF1-203ENST00000372195 GCKRQ14397 625 aa26.61■■□□□ 1.85
RAPGEF1-203ENST00000372195 CRCPO75575 148 aa26.6■■□□□ 1.85
RAPGEF1-203ENST00000372195 NONOQ15233 471 aaKnown RBP eCLIP26.6■■□□□ 1.859e-7■■■■□ 22.5
RAPGEF1-203ENST00000372195 CPXCR1Q8N123 301 aa26.6■■□□□ 1.85
RAPGEF1-203ENST00000372195 HSPA2P54652 639 aa26.6■■□□□ 1.85
RAPGEF1-203ENST00000372195 KLHL30Q0D2K2 578 aa26.6■■□□□ 1.85
RAPGEF1-203ENST00000372195 CCDC14Q49A88 953 aa26.6■■□□□ 1.85
RAPGEF1-203ENST00000372195 ATP5DP30049 168 aa26.6■■□□□ 1.85
RAPGEF1-203ENST00000372195 ALDH3A1P30838 453 aa26.6■■□□□ 1.85
RAPGEF1-203ENST00000372195 AOX1Q06278 1338 aa26.6■■□□□ 1.85
RAPGEF1-203ENST00000372195 ACTN4O43707 911 aaKnown RBP26.6■■□□□ 1.85
RAPGEF1-203ENST00000372195 KCNQ3O43525 872 aa26.59■■□□□ 1.85
RAPGEF1-203ENST00000372195 TAF12Q16514 161 aa26.59■■□□□ 1.85
RAPGEF1-203ENST00000372195 A0A0D9SFI3 127 aa26.59■■□□□ 1.85
RAPGEF1-203ENST00000372195 SH3BP5O60239 455 aa26.59■■□□□ 1.85
RAPGEF1-203ENST00000372195 FYB2Q5VWT5 728 aa26.59■■□□□ 1.85
RAPGEF1-203ENST00000372195 SEPT14Q6ZU15 432 aa26.59■■□□□ 1.85
RAPGEF1-203ENST00000372195 B4GALNT4Q76KP1 1039 aa26.59■■□□□ 1.85
RAPGEF1-203ENST00000372195 PCK1P35558 622 aa26.59■■□□□ 1.85
RAPGEF1-203ENST00000372195 SNX16P57768 344 aa26.59■■□□□ 1.85
RAPGEF1-203ENST00000372195 LIN9Q5TKA1 542 aa26.59■■□□□ 1.85
RAPGEF1-203ENST00000372195 NUP58Q9BVL2 599 aa26.59■■□□□ 1.85
RAPGEF1-203ENST00000372195 GGA1Q9UJY5 639 aa26.59■■□□□ 1.85
RAPGEF1-203ENST00000372195 DAPK3O43293 454 aa26.59■■□□□ 1.85
RAPGEF1-203ENST00000372195 ARID4AP29374 1257 aaPredicted RBP26.59■■□□□ 1.85
RAPGEF1-203ENST00000372195 SFMBT2Q5VUG0 894 aa26.59■■□□□ 1.85
RAPGEF1-203ENST00000372195 LSM14BQ9BX40 385 aaKnown RBP26.59■■□□□ 1.85
RAPGEF1-203ENST00000372195 PFKFB1P16118 471 aa26.59■■□□□ 1.85
RAPGEF1-203ENST00000372195 TMTC1Q8IUR5 882 aa26.59■■□□□ 1.85
RAPGEF1-203ENST00000372195 FRMPD2Q68DX3 1309 aaPredicted RBP26.58■■□□□ 1.85
RAPGEF1-203ENST00000372195 SH3TC1Q8TE82 1336 aa26.58■■□□□ 1.85
RAPGEF1-203ENST00000372195 ZNF827Q17R98 1081 aa26.58■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms