RNA–Protein interactions for RNA: ENST00000369653.8

UBL4A-201, Transcript of ubiquitin like 4A, humanhuman

TSL 3 BASIC

Gene UBL4A, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4A-201ENST00000369653 ENTPD3O75355 529 aa17.22■□□□□ 0.35
UBL4A-201ENST00000369653 GNRH1P01148 92 aa17.22■□□□□ 0.35
UBL4A-201ENST00000369653 PDE1AP54750 535 aa17.22■□□□□ 0.35
UBL4A-201ENST00000369653 PRMT2P55345 433 aa17.22■□□□□ 0.35
UBL4A-201ENST00000369653 PPP4CP60510 307 aa17.22■□□□□ 0.35
UBL4A-201ENST00000369653 TEX11Q8IYF3 940 aa17.22■□□□□ 0.35
UBL4A-201ENST00000369653 PARK7Q99497 189 aaKnown RBP17.22■□□□□ 0.35
UBL4A-201ENST00000369653 ZNF532Q9HCE3 1301 aa17.21■□□□□ 0.35
UBL4A-201ENST00000369653 A0A0G2JLL6 359 aaPredicted RBP17.21■□□□□ 0.35
UBL4A-201ENST00000369653 ELNP15502 786 aa17.21■□□□□ 0.35
UBL4A-201ENST00000369653 PTPRAP18433 802 aa17.21■□□□□ 0.35
UBL4A-201ENST00000369653 ADD2P35612 726 aa17.21■□□□□ 0.35
UBL4A-201ENST00000369653 LRRFIP1Q32MZ4 808 aaKnown RBP17.21■□□□□ 0.35
UBL4A-201ENST00000369653 PRRT2Q7Z6L0 340 aaPredicted RBP17.21■□□□□ 0.35
UBL4A-201ENST00000369653 SCYL3Q8IZE3 742 aa17.21■□□□□ 0.35
UBL4A-201ENST00000369653 KBTBD3Q8NAB2 608 aa17.21■□□□□ 0.35
UBL4A-201ENST00000369653 MIGA1Q8NAN2 632 aa17.21■□□□□ 0.35
UBL4A-201ENST00000369653 SH3RF3Q8TEJ3 882 aaPredicted RBP17.21■□□□□ 0.35
UBL4A-201ENST00000369653 DPF3Q92784 378 aa17.21■□□□□ 0.35
UBL4A-201ENST00000369653 RNF208Q9H0X6 261 aa17.21■□□□□ 0.35
UBL4A-201ENST00000369653 UNC93B1Q9H1C4 597 aa17.21■□□□□ 0.35
UBL4A-201ENST00000369653 COL6A3P12111 3177 aa17.21■□□□□ 0.35
UBL4A-201ENST00000369653 FOCADQ5VW36 1801 aa17.21■□□□□ 0.35
UBL4A-201ENST00000369653 COL2A1P02458 1487 aaPredicted RBP17.2■□□□□ 0.34
UBL4A-201ENST00000369653 TRIM75PA6NK02 468 aa17.2■□□□□ 0.34
UBL4A-201ENST00000369653 NPM3O75607 178 aaKnown RBP17.2■□□□□ 0.34
UBL4A-201ENST00000369653 PICK1Q9NRD5 415 aa17.2■□□□□ 0.34
UBL4A-201ENST00000369653 MAGEB6P1A0A0J9YX57 407 aa17.19■□□□□ 0.34
UBL4A-201ENST00000369653 TCRBV5S4A2TA0A5A2 114 aa17.19■□□□□ 0.34
UBL4A-201ENST00000369653 CXCL11O14625 94 aa17.19■□□□□ 0.34
UBL4A-201ENST00000369653 HOXD10P28358 340 aa17.19■□□□□ 0.34
UBL4A-201ENST00000369653 FCGRTP55899 365 aa17.19■□□□□ 0.34
UBL4A-201ENST00000369653 UBE3CQ15386 1083 aa17.19■□□□□ 0.34
UBL4A-201ENST00000369653 RBM27Q9P2N5 1060 aaKnown RBP17.19■□□□□ 0.34
UBL4A-201ENST00000369653 AFG3L2Q9Y4W6 797 aa17.19■□□□□ 0.34
UBL4A-201ENST00000369653 ZFYP08048 801 aaPredicted RBP17.18■□□□□ 0.34
UBL4A-201ENST00000369653 GJA8P48165 433 aa17.18■□□□□ 0.34
UBL4A-201ENST00000369653 DYNLL1P63167 89 aaKnown RBP17.18■□□□□ 0.34
UBL4A-201ENST00000369653 TREML2Q5T2D2 321 aa17.18■□□□□ 0.34
UBL4A-201ENST00000369653 CENPQQ7L2Z9 268 aaPredicted RBP17.18■□□□□ 0.34
UBL4A-201ENST00000369653 UBE2Q1Q7Z7E8 422 aa17.18■□□□□ 0.34
UBL4A-201ENST00000369653 FSD1Q9BTV5 496 aa17.18■□□□□ 0.34
UBL4A-201ENST00000369653 OSBPL5Q9H0X9 879 aaPredicted RBP17.18■□□□□ 0.34
UBL4A-201ENST00000369653 OSBPL3Q9H4L5 887 aa17.18■□□□□ 0.34
UBL4A-201ENST00000369653 TAOK2Q9UL54 1235 aa17.18■□□□□ 0.34
UBL4A-201ENST00000369653 ADCY3O60266 1144 aa17.17■□□□□ 0.34
UBL4A-201ENST00000369653 GJB1P08034 283 aa17.17■□□□□ 0.34
UBL4A-201ENST00000369653 FLT3LGP49771 235 aa17.17■□□□□ 0.34
UBL4A-201ENST00000369653 PLEKHM2Q8IWE5 1019 aa17.17■□□□□ 0.34
UBL4A-201ENST00000369653 U2AF1L4Q8WU68 220 aaKnown RBP17.17■□□□□ 0.34
UBL4A-201ENST00000369653 RIOK1Q9BRS2 568 aaKnown RBP17.17■□□□□ 0.34
UBL4A-201ENST00000369653 FLT1P17948 1338 aa17.17■□□□□ 0.34
UBL4A-201ENST00000369653 DDX60LQ5H9U9 1706 aaKnown RBP17.16■□□□□ 0.34
UBL4A-201ENST00000369653 FARP2O94887 1054 aaPredicted RBP17.16■□□□□ 0.34
UBL4A-201ENST00000369653 INHAP05111 366 aa17.16■□□□□ 0.34
UBL4A-201ENST00000369653 USP5P45974 858 aa17.16■□□□□ 0.34
UBL4A-201ENST00000369653 UBXN2AP68543 259 aa17.16■□□□□ 0.34
UBL4A-201ENST00000369653 MAPKAPK5Q8IW41 473 aa17.16■□□□□ 0.34
UBL4A-201ENST00000369653 SLAIN1Q8ND83 568 aa17.16■□□□□ 0.34
UBL4A-201ENST00000369653 TGFBRAP1Q8WUH2 860 aa17.16■□□□□ 0.34
UBL4A-201ENST00000369653 EVI5LQ96CN4 794 aa17.16■□□□□ 0.34
UBL4A-201ENST00000369653 CCDC136Q96JN2 1154 aa17.16■□□□□ 0.34
UBL4A-201ENST00000369653 CRNKL1Q9BZJ0 848 aaKnown RBP17.16■□□□□ 0.34
UBL4A-201ENST00000369653 MYH1P12882 1939 aa17.15■□□□□ 0.34
UBL4A-201ENST00000369653 RNF113AO15541 343 aaKnown RBP17.15■□□□□ 0.34
UBL4A-201ENST00000369653 RRP1BQ14684 758 aaKnown RBP17.15■□□□□ 0.34
UBL4A-201ENST00000369653 FASTKD5Q7L8L6 764 aaKnown RBP17.15■□□□□ 0.34
UBL4A-201ENST00000369653 ANKRD13CQ8N6S4 541 aa17.15■□□□□ 0.34
UBL4A-201ENST00000369653 SMCR8Q8TEV9 937 aaPredicted RBP17.15■□□□□ 0.34
UBL4A-201ENST00000369653 APPBP2Q92624 585 aa17.15■□□□□ 0.34
UBL4A-201ENST00000369653 TNPO2O14787 897 aaKnown RBP17.14■□□□□ 0.33
UBL4A-201ENST00000369653 MBD4O95243 580 aa17.14■□□□□ 0.33
UBL4A-201ENST00000369653 PDE4AP27815 886 aa17.14■□□□□ 0.33
UBL4A-201ENST00000369653 MAP3K10Q02779 954 aa17.14■□□□□ 0.33
UBL4A-201ENST00000369653 ERICH6BQ5W0A0 696 aa17.14■□□□□ 0.33
UBL4A-201ENST00000369653 LCORLQ8N3X6 602 aa17.14■□□□□ 0.33
UBL4A-201ENST00000369653 NKX2-3Q8TAU0 364 aa17.14■□□□□ 0.33
UBL4A-201ENST00000369653 DHX36Q9H2U1 1008 aaKnown RBP17.14■□□□□ 0.33
UBL4A-201ENST00000369653 ARMT1Q9H993 441 aa17.14■□□□□ 0.33
UBL4A-201ENST00000369653 DNAH12Q6ZR08 3092 aa17.14■□□□□ 0.33
UBL4A-201ENST00000369653 MYH7P12883 1935 aa17.13■□□□□ 0.33
UBL4A-201ENST00000369653 FRMPD3Q5JV73 1810 aa17.13■□□□□ 0.33
UBL4A-201ENST00000369653 TRIM6-TRIM34B2RNG4 842 aa17.13■□□□□ 0.33
UBL4A-201ENST00000369653 CTNND1O60716 968 aaKnown RBP17.13■□□□□ 0.33
UBL4A-201ENST00000369653 CHGBP05060 677 aa17.13■□□□□ 0.33
UBL4A-201ENST00000369653 SLFNL1Q499Z3 407 aa17.13■□□□□ 0.33
UBL4A-201ENST00000369653 DEFB118Q96PH6 123 aa17.13■□□□□ 0.33
UBL4A-201ENST00000369653 AGTPBP1Q9UPW5 1226 aa17.13■□□□□ 0.33
UBL4A-201ENST00000369653 A0A0C4DFX4 3053 aa17.12■□□□□ 0.33
UBL4A-201ENST00000369653 PEX10O60683 326 aa17.12■□□□□ 0.33
UBL4A-201ENST00000369653 HLA-DOAP06340 250 aa17.12■□□□□ 0.33
UBL4A-201ENST00000369653 HMGCS2P54868 508 aa17.12■□□□□ 0.33
UBL4A-201ENST00000369653 SHROOM1Q2M3G4 852 aaPredicted RBP17.12■□□□□ 0.33
UBL4A-201ENST00000369653 TICAM2Q86XR7 235 aa17.12■□□□□ 0.33
UBL4A-201ENST00000369653 DIS3LQ8TF46 1054 aaKnown RBP17.12■□□□□ 0.33
UBL4A-201ENST00000369653 HTATIP2Q9BUP3 242 aa17.12■□□□□ 0.33
UBL4A-201ENST00000369653 PUS7LQ9H0K6 701 aaKnown RBP17.12■□□□□ 0.33
UBL4A-201ENST00000369653 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.12■□□□□ 0.33
UBL4A-201ENST00000369653 SGPL1O95470 568 aa17.11■□□□□ 0.33
UBL4A-201ENST00000369653 TRIM32Q13049 653 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms